RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 VPREB1P12018 145 aa8.46□□□□□ -1.06
TSPAN9-201ENST00000011898 LITAFQ99732 161 aa8.45□□□□□ -1.06
TSPAN9-201ENST00000011898 KPRPQ5T749 579 aaPredicted RBP8.45□□□□□ -1.06
TSPAN9-201ENST00000011898 TACC2O95359 2948 aa8.44□□□□□ -1.06
TSPAN9-201ENST00000011898 IGHV3OR16-9A0A0B4J2B5 98 aa8.44□□□□□ -1.06
TSPAN9-201ENST00000011898 SPATA3Q8NHX4 192 aa8.44□□□□□ -1.06
TSPAN9-201ENST00000011898 KLKP1Q107X0 134 aa8.44□□□□□ -1.06
TSPAN9-201ENST00000011898 C1orf137Q5JT78 98 aa8.44□□□□□ -1.06
TSPAN9-201ENST00000011898 IGLV5-45A0A087WSX0 123 aa8.43□□□□□ -1.06
TSPAN9-201ENST00000011898 LY6G6CO95867 125 aa8.43□□□□□ -1.06
TSPAN9-201ENST00000011898 SYCNQ0VAF6 134 aa8.43□□□□□ -1.06
TSPAN9-201ENST00000011898 A0A1B0GUV1 79 aa8.43□□□□□ -1.06
TSPAN9-201ENST00000011898 ZNF575Q86XF7 245 aa8.43□□□□□ -1.06
TSPAN9-201ENST00000011898 M0R378 163 aa8.42□□□□□ -1.06
TSPAN9-201ENST00000011898 IGKV2-24A0A0C4DH68 120 aa8.41□□□□□ -1.06
TSPAN9-201ENST00000011898 H0Y9P7 68 aa8.41□□□□□ -1.06
TSPAN9-201ENST00000011898 M0R2N4 97 aa8.41□□□□□ -1.06
TSPAN9-201ENST00000011898 MDFIQ99750 246 aa8.4□□□□□ -1.06
TSPAN9-201ENST00000011898 Q5XG85 94 aa8.4□□□□□ -1.06
TSPAN9-201ENST00000011898 Q6ZQT0 140 aa8.39□□□□□ -1.07
TSPAN9-201ENST00000011898 hDV103S1A0JD37 113 aa8.39□□□□□ -1.07
TSPAN9-201ENST00000011898 PDZD2O15018 2839 aa8.39□□□□□ -1.07
TSPAN9-201ENST00000011898 RPL37AP8A6NKH3 93 aa8.39□□□□□ -1.07
TSPAN9-201ENST00000011898 KRTAP24-1Q3LI83 254 aa8.38□□□□□ -1.07
TSPAN9-201ENST00000011898 SPAG11AQ6PDA7 123 aa8.38□□□□□ -1.07
TSPAN9-201ENST00000011898 C6orf223Q8N319 242 aa8.38□□□□□ -1.07
TSPAN9-201ENST00000011898 CYSTM1Q9H1C7 97 aa8.38□□□□□ -1.07
TSPAN9-201ENST00000011898 C10orf25Q5T742 122 aa8.37□□□□□ -1.07
TSPAN9-201ENST00000011898 K7ERS5 55 aa8.36□□□□□ -1.07
TSPAN9-201ENST00000011898 DHRS4-AS1Q9P1J3 65 aa8.36□□□□□ -1.07
TSPAN9-201ENST00000011898 KTN1-AS1Q86SY8 53 aa8.35□□□□□ -1.07
TSPAN9-201ENST00000011898 C9orf129Q5T035 196 aaKnown RBP8.34□□□□□ -1.07
TSPAN9-201ENST00000011898 TRAV22A0A0B4J277 110 aa8.34□□□□□ -1.07
TSPAN9-201ENST00000011898 C4orf48Q5BLP8 95 aa8.34□□□□□ -1.07
TSPAN9-201ENST00000011898 C1orf64Q8NEQ6 169 aa8.34□□□□□ -1.07
TSPAN9-201ENST00000011898 EGFEM1PQ0D2K5 195 aa8.33□□□□□ -1.08
TSPAN9-201ENST00000011898 A0A087WSZ3 146 aa8.33□□□□□ -1.08
TSPAN9-201ENST00000011898 ASH1LQ9NR48 2969 aaKnown RBP8.32□□□□□ -1.08
TSPAN9-201ENST00000011898 Q6ZTC4 211 aa8.32□□□□□ -1.08
TSPAN9-201ENST00000011898 SPINK6Q6UWN8 80 aa8.31□□□□□ -1.08
TSPAN9-201ENST00000011898 LOC110117498A0A087WWA1 95 aa8.29□□□□□ -1.08
TSPAN9-201ENST00000011898 ZANQ9Y493 2812 aa8.29□□□□□ -1.08
TSPAN9-201ENST00000011898 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.29□□□□□ -1.08
TSPAN9-201ENST00000011898 LYPD5Q6UWN5 251 aa8.29□□□□□ -1.08
TSPAN9-201ENST00000011898 OXTP01178 125 aa8.28□□□□□ -1.08
TSPAN9-201ENST00000011898 C8orf87E5RJ46 101 aa8.27□□□□□ -1.09
TSPAN9-201ENST00000011898 X6R8D5 127 aa8.27□□□□□ -1.09
TSPAN9-201ENST00000011898 ATP11AUNQ6ZP68 121 aa8.27□□□□□ -1.09
TSPAN9-201ENST00000011898 FP248Q71RG6 208 aaPredicted RBP8.27□□□□□ -1.09
TSPAN9-201ENST00000011898 HIVEP1P15822 2718 aa8.27□□□□□ -1.09
TSPAN9-201ENST00000011898 ERC2-IT1O76042 136 aa8.27□□□□□ -1.09
TSPAN9-201ENST00000011898 PRR15Q8IV56 129 aa8.26□□□□□ -1.09
TSPAN9-201ENST00000011898 RBM12B-AS1Q9P1G2 102 aa8.26□□□□□ -1.09
TSPAN9-201ENST00000011898 C7orf65Q6ZTY9 151 aa8.25□□□□□ -1.09
TSPAN9-201ENST00000011898 LCA10Q71F78 164 aa8.25□□□□□ -1.09
TSPAN9-201ENST00000011898 KIAA0087Q14695 138 aa8.25□□□□□ -1.09
TSPAN9-201ENST00000011898 H3BS24 57 aa8.24□□□□□ -1.09
TSPAN9-201ENST00000011898 Q6ZRU5 148 aa8.24□□□□□ -1.09
TSPAN9-201ENST00000011898 RETNLBQ9BQ08 111 aa8.24□□□□□ -1.09
TSPAN9-201ENST00000011898 CYP4F30PQ9H0H9 118 aa8.24□□□□□ -1.09
TSPAN9-201ENST00000011898 C14orf177Q52M58 125 aa8.24□□□□□ -1.09
TSPAN9-201ENST00000011898 KRTAP10-3P60369 221 aa8.23□□□□□ -1.09
TSPAN9-201ENST00000011898 NBPF19A0A087WUL8 3843 aa8.22□□□□□ -1.09
TSPAN9-201ENST00000011898 LINC01600Q96MT4 127 aa8.21□□□□□ -1.1
TSPAN9-201ENST00000011898 NSD1Q96L73 2696 aaPredicted RBP8.21□□□□□ -1.1
TSPAN9-201ENST00000011898 CSNK1G2-AS1Q8NCQ2 148 aa8.21□□□□□ -1.1
TSPAN9-201ENST00000011898 GIG44P09565 113 aaPredicted RBP8.2□□□□□ -1.1
TSPAN9-201ENST00000011898 OTOGQ6ZRI0 2925 aa8.2□□□□□ -1.1
TSPAN9-201ENST00000011898 A0A1B0GU69 56 aa8.2□□□□□ -1.1
TSPAN9-201ENST00000011898 LOC101927531A0A1B0GV80 90 aa8.2□□□□□ -1.1
TSPAN9-201ENST00000011898 C6orf48Q9UBA6 75 aa8.19□□□□□ -1.1
TSPAN9-201ENST00000011898 IGHV6-1A0A0B4J1U7 121 aa8.19□□□□□ -1.1
TSPAN9-201ENST00000011898 CSMD2Q7Z408 3487 aa8.18□□□□□ -1.1
TSPAN9-201ENST00000011898 NBEAL2Q6ZNJ1 2754 aa8.18□□□□□ -1.1
TSPAN9-201ENST00000011898 IGLV9-49A0A0B4J1Y8 123 aa8.17□□□□□ -1.1
TSPAN9-201ENST00000011898 SPINK1P00995 79 aa8.17□□□□□ -1.1
TSPAN9-201ENST00000011898 TRBV7-4A0A0J9YYF1 115 aa8.17□□□□□ -1.1
TSPAN9-201ENST00000011898 COA5Q86WW8 74 aa8.16□□□□□ -1.1
TSPAN9-201ENST00000011898 C19orf73Q9NVV2 129 aa8.16□□□□□ -1.1
TSPAN9-201ENST00000011898 FAM229BQ4G0N7 80 aa8.16□□□□□ -1.1
TSPAN9-201ENST00000011898 ZNF706Q9Y5V0 76 aaPredicted RBP8.15□□□□□ -1.11
TSPAN9-201ENST00000011898 Q8NAQ8 132 aa8.15□□□□□ -1.11
TSPAN9-201ENST00000011898 Q8NBF4 154 aa8.15□□□□□ -1.11
TSPAN9-201ENST00000011898 K7EQZ3 153 aa8.13□□□□□ -1.11
TSPAN9-201ENST00000011898 CSMD1Q96PZ7 3565 aa8.13□□□□□ -1.11
TSPAN9-201ENST00000011898 Q9BRP9 147 aa8.13□□□□□ -1.11
TSPAN9-201ENST00000011898 IGLV8-61A0A075B6I0 122 aa8.12□□□□□ -1.11
TSPAN9-201ENST00000011898 ELOF1P60002 83 aaKnown RBP8.12□□□□□ -1.11
TSPAN9-201ENST00000011898 MXRA5Q9NR99 2828 aa8.12□□□□□ -1.11
TSPAN9-201ENST00000011898 FAM104AQ969W3 186 aa8.12□□□□□ -1.11
TSPAN9-201ENST00000011898 NUPR2A6NF83 97 aa8.12□□□□□ -1.11
TSPAN9-201ENST00000011898 REG3GQ6UW15 175 aa8.12□□□□□ -1.11
TSPAN9-201ENST00000011898 ANK3Q12955 4377 aaKnown RBP8.11□□□□□ -1.11
TSPAN9-201ENST00000011898 RPL37AP61513 92 aaKnown RBP8.11□□□□□ -1.11
TSPAN9-201ENST00000011898 LINC01556Q5JQF7 62 aa8.11□□□□□ -1.11
TSPAN9-201ENST00000011898 C7orf33Q8WU49 177 aa8.11□□□□□ -1.11
TSPAN9-201ENST00000011898 AKAP9Q99996 3911 aa8.1□□□□□ -1.11
TSPAN9-201ENST00000011898 H3BPC8 53 aa8.1□□□□□ -1.11
TSPAN9-201ENST00000011898 Q1T7F1 81 aa8.1□□□□□ -1.11
TSPAN9-201ENST00000011898 C22orf24Q9Y442 160 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms