RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 Q6ZQT0 140 aa6.8□□□□□ -1.32
NIPAL3-201ENST00000003912 TRBV7-7A0A0K0K1E9 115 aa6.79□□□□□ -1.32
NIPAL3-201ENST00000003912 SPINK1P00995 79 aa6.78□□□□□ -1.32
NIPAL3-201ENST00000003912 SPAG11AQ6PDA7 123 aa6.78□□□□□ -1.32
NIPAL3-201ENST00000003912 C1orf64Q8NEQ6 169 aa6.78□□□□□ -1.32
NIPAL3-201ENST00000003912 TRBV7-4A0A0J9YYF1 115 aa6.78□□□□□ -1.32
NIPAL3-201ENST00000003912 SMR3BP02814 79 aaPredicted RBP6.78□□□□□ -1.32
NIPAL3-201ENST00000003912 C9orf129Q5T035 196 aaKnown RBP6.78□□□□□ -1.32
NIPAL3-201ENST00000003912 SSBP3-AS1Q7Z2R9 100 aa6.77□□□□□ -1.33
NIPAL3-201ENST00000003912 CASC10Q5T4H9 136 aa6.77□□□□□ -1.33
NIPAL3-201ENST00000003912 SMIM29Q86T20 159 aa6.77□□□□□ -1.33
NIPAL3-201ENST00000003912 TMEM254Q8TBM7 123 aa6.77□□□□□ -1.33
NIPAL3-201ENST00000003912 LINC00528Q8N1L1 170 aa6.77□□□□□ -1.33
NIPAL3-201ENST00000003912 LINC00304Q8N9R0 145 aa6.77□□□□□ -1.33
NIPAL3-201ENST00000003912 ATP11AUNQ6ZP68 121 aa6.77□□□□□ -1.33
NIPAL3-201ENST00000003912 A6NED7 52 aa6.76□□□□□ -1.33
NIPAL3-201ENST00000003912 C8orf87E5RJ46 101 aa6.75□□□□□ -1.33
NIPAL3-201ENST00000003912 CR1P17927 2039 aa6.75□□□□□ -1.33
NIPAL3-201ENST00000003912 Q96NJ1 140 aa6.75□□□□□ -1.33
NIPAL3-201ENST00000003912 PRO0628Q9UI54 55 aa6.75□□□□□ -1.33
NIPAL3-201ENST00000003912 IGLV7-43P04211 117 aa6.74□□□□□ -1.33
NIPAL3-201ENST00000003912 PCNTO95613 3336 aa6.74□□□□□ -1.33
NIPAL3-201ENST00000003912 C7orf65Q6ZTY9 151 aa6.74□□□□□ -1.33
NIPAL3-201ENST00000003912 CENPEQ02224 2701 aa6.73□□□□□ -1.33
NIPAL3-201ENST00000003912 SMCPP49901 116 aaPredicted RBP6.73□□□□□ -1.33
NIPAL3-201ENST00000003912 A0A1W2PNN7 141 aa6.72□□□□□ -1.33
NIPAL3-201ENST00000003912 PSORS1C2Q9UIG4 136 aa6.72□□□□□ -1.33
NIPAL3-201ENST00000003912 TNP2Q05952 138 aa6.71□□□□□ -1.34
NIPAL3-201ENST00000003912 RPS28P62857 69 aaKnown RBP6.7□□□□□ -1.34
NIPAL3-201ENST00000003912 PMAIP1Q13794 54 aa6.7□□□□□ -1.34
NIPAL3-201ENST00000003912 PRO0461Q9UI25 63 aa6.7□□□□□ -1.34
NIPAL3-201ENST00000003912 A8MWP4 228 aa6.7□□□□□ -1.34
NIPAL3-201ENST00000003912 BPTFQ12830 3046 aa6.69□□□□□ -1.34
NIPAL3-201ENST00000003912 H3BPC8 53 aa6.69□□□□□ -1.34
NIPAL3-201ENST00000003912 IGFL1Q6UW32 110 aa6.69□□□□□ -1.34
NIPAL3-201ENST00000003912 LAMA3Q16787 3333 aa6.69□□□□□ -1.34
NIPAL3-201ENST00000003912 TRAV22A0A0B4J277 110 aa6.67□□□□□ -1.34
NIPAL3-201ENST00000003912 EIF4EBP3O60516 100 aaPredicted RBP6.67□□□□□ -1.34
NIPAL3-201ENST00000003912 ACYP2P14621 99 aa6.67□□□□□ -1.34
NIPAL3-201ENST00000003912 MKI67P46013 3256 aaKnown RBP6.66□□□□□ -1.34
NIPAL3-201ENST00000003912 C4orf26Q17RF5 130 aa6.66□□□□□ -1.34
NIPAL3-201ENST00000003912 Q8N377 158 aa6.66□□□□□ -1.34
NIPAL3-201ENST00000003912 MRPL34Q9BQ48 92 aaKnown RBP6.66□□□□□ -1.34
NIPAL3-201ENST00000003912 IGLV5-37A0A075B6J1 123 aa6.66□□□□□ -1.34
NIPAL3-201ENST00000003912 SPRR4Q96PI1 79 aa6.66□□□□□ -1.34
NIPAL3-201ENST00000003912 MGAQ8IWI9 3026 aa6.64□□□□□ -1.35
NIPAL3-201ENST00000003912 LOC101927531A0A1B0GV80 90 aa6.64□□□□□ -1.35
NIPAL3-201ENST00000003912 COX6B2Q6YFQ2 88 aa6.64□□□□□ -1.35
NIPAL3-201ENST00000003912 ANAPC11Q9NYG5 84 aa6.63□□□□□ -1.35
NIPAL3-201ENST00000003912 TEP1Q99973 2627 aaKnown RBP6.63□□□□□ -1.35
NIPAL3-201ENST00000003912 BAHCC1Q9P281 2608 aa6.62□□□□□ -1.35
NIPAL3-201ENST00000003912 UNC79Q9P2D8 2635 aa6.62□□□□□ -1.35
NIPAL3-201ENST00000003912 K7EQZ3 153 aa6.62□□□□□ -1.35
NIPAL3-201ENST00000003912 IGSF10Q6WRI0 2623 aa6.62□□□□□ -1.35
NIPAL3-201ENST00000003912 DSCR10P59022 87 aa6.61□□□□□ -1.35
NIPAL3-201ENST00000003912 AKAP13Q12802 2813 aa6.61□□□□□ -1.35
NIPAL3-201ENST00000003912 PSPHP1O15172 72 aa6.61□□□□□ -1.35
NIPAL3-201ENST00000003912 OBSCN-AS1Q96MR7 158 aa6.6□□□□□ -1.35
NIPAL3-201ENST00000003912 C8orf17Q9NRJ1 99 aa6.6□□□□□ -1.35
NIPAL3-201ENST00000003912 A0A1B0GVX0 72 aa6.6□□□□□ -1.35
NIPAL3-201ENST00000003912 C9orf92A6NGG3 77 aa6.6□□□□□ -1.35
NIPAL3-201ENST00000003912 PRR15Q8IV56 129 aa6.59□□□□□ -1.35
NIPAL3-201ENST00000003912 ERC2-IT1O76042 136 aa6.59□□□□□ -1.35
NIPAL3-201ENST00000003912 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.58□□□□□ -1.36
NIPAL3-201ENST00000003912 SETXQ7Z333 2677 aaKnown RBP6.57□□□□□ -1.36
NIPAL3-201ENST00000003912 A0A1B0GU69 56 aa6.57□□□□□ -1.36
NIPAL3-201ENST00000003912 DSPP15924 2871 aaKnown RBP6.55□□□□□ -1.36
NIPAL3-201ENST00000003912 A0A0G2JQZ4 141 aa6.55□□□□□ -1.36
NIPAL3-201ENST00000003912 LCE6AA0A183 80 aa6.55□□□□□ -1.36
NIPAL3-201ENST00000003912 BRCA2P51587 3418 aa6.55□□□□□ -1.36
NIPAL3-201ENST00000003912 COL6A5A8TX70 2615 aa6.55□□□□□ -1.36
NIPAL3-201ENST00000003912 TEX15Q9BXT5 2789 aa6.54□□□□□ -1.36
NIPAL3-201ENST00000003912 STAB1Q9NY15 2570 aa6.54□□□□□ -1.36
NIPAL3-201ENST00000003912 PLAC8Q9NZF1 115 aa6.54□□□□□ -1.36
NIPAL3-201ENST00000003912 CD164Q04900 197 aa6.53□□□□□ -1.36
NIPAL3-201ENST00000003912 PRUNE2Q8WUY3 3088 aa6.52□□□□□ -1.37
NIPAL3-201ENST00000003912 FAM229BQ4G0N7 80 aa6.51□□□□□ -1.37
NIPAL3-201ENST00000003912 RBM12B-AS1Q9P1G2 102 aa6.5□□□□□ -1.37
NIPAL3-201ENST00000003912 FAM104AQ969W3 186 aa6.5□□□□□ -1.37
NIPAL3-201ENST00000003912 A0A1W2PNM2 257 aa6.5□□□□□ -1.37
NIPAL3-201ENST00000003912 IGLV5-48A0A075B6I7 105 aa6.49□□□□□ -1.37
NIPAL3-201ENST00000003912 PRR26Q8N8Z3 221 aa6.49□□□□□ -1.37
NIPAL3-201ENST00000003912 WDFY4Q6ZS81 3184 aa6.49□□□□□ -1.37
NIPAL3-201ENST00000003912 IGLV7-46A0A075B6I9 117 aa6.47□□□□□ -1.37
NIPAL3-201ENST00000003912 KRTAP1-5Q9BYS1 174 aa6.46□□□□□ -1.37
NIPAL3-201ENST00000003912 CHD6Q8TD26 2715 aa6.45□□□□□ -1.38
NIPAL3-201ENST00000003912 A0A0C4DFX4 3053 aa6.44□□□□□ -1.38
NIPAL3-201ENST00000003912 KRTAP21-3Q3LHN1 58 aa6.43□□□□□ -1.38
NIPAL3-201ENST00000003912 Q6ZSA8 131 aa6.42□□□□□ -1.38
NIPAL3-201ENST00000003912 GCN1Q92616 2671 aaKnown RBP6.41□□□□□ -1.38
NIPAL3-201ENST00000003912 SPRR1AP35321 89 aa6.4□□□□□ -1.38
NIPAL3-201ENST00000003912 Q5VSD8 79 aa6.4□□□□□ -1.38
NIPAL3-201ENST00000003912 CFAP54Q96N23 3096 aa6.4□□□□□ -1.39
NIPAL3-201ENST00000003912 COA5Q86WW8 74 aa6.39□□□□□ -1.39
NIPAL3-201ENST00000003912 KRTAP26-1Q6PEX3 210 aa6.39□□□□□ -1.39
NIPAL3-201ENST00000003912 KRTAP10-1P60331 282 aa6.38□□□□□ -1.39
NIPAL3-201ENST00000003912 IGLV8-61A0A075B6I0 122 aa6.38□□□□□ -1.39
NIPAL3-201ENST00000003912 NOTCH1P46531 2555 aa6.38□□□□□ -1.39
NIPAL3-201ENST00000003912 UNC80Q8N2C7 3258 aa6.37□□□□□ -1.39
NIPAL3-201ENST00000003912 KRTAP10-2P60368 255 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms