RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Fndc10A2A9Q0 223 aa12.38□□□□□ -0.43
Trim39-203ENSMUST00000113706 Scgb2a2J3KMP9 96 aa12.38□□□□□ -0.43
Trim39-203ENSMUST00000113706 Znf664Q4VA44 261 aa12.38□□□□□ -0.43
Trim39-203ENSMUST00000113706 Nbl1Q61477 178 aa12.38□□□□□ -0.43
Trim39-203ENSMUST00000113706 Mob4Q6PEB6 225 aa12.38□□□□□ -0.43
Trim39-203ENSMUST00000113706 Gnb4P29387 340 aa12.37□□□□□ -0.43
Trim39-203ENSMUST00000113706 Vamp3P63024 103 aa12.37□□□□□ -0.43
Trim39-203ENSMUST00000113706 Fa2hQ5MPP0 372 aa12.37□□□□□ -0.43
Trim39-203ENSMUST00000113706 Slc17a2Q5SZA1 478 aa12.37□□□□□ -0.43
Trim39-203ENSMUST00000113706 Gm26965M0QWH4 86 aa12.37□□□□□ -0.43
Trim39-203ENSMUST00000113706 Atp6v0cP63082 155 aa12.37□□□□□ -0.43
Trim39-203ENSMUST00000113706 Tas2r114Q7M722 309 aa12.37□□□□□ -0.43
Trim39-203ENSMUST00000113706 Rab4bQ91ZR1 213 aa12.37□□□□□ -0.43
Trim39-203ENSMUST00000113706 1700056E22RikF7CNM6 234 aa12.37□□□□□ -0.43
Trim39-203ENSMUST00000113706 Gm6970F7DCP6 221 aa12.37□□□□□ -0.43
Trim39-203ENSMUST00000113706 Cd3eP22646 189 aa12.37□□□□□ -0.43
Trim39-203ENSMUST00000113706 Arl14eplQ3UKZ7 152 aa12.37□□□□□ -0.43
Trim39-203ENSMUST00000113706 Ighv1-77A0A0G2JGS9 117 aa12.36□□□□□ -0.43
Trim39-203ENSMUST00000113706 P04219 140 aa12.36□□□□□ -0.43
Trim39-203ENSMUST00000113706 Rplp1P47955 114 aa12.36□□□□□ -0.43
Trim39-203ENSMUST00000113706 PgpQ8CHP8 321 aa12.36□□□□□ -0.43
Trim39-203ENSMUST00000113706 ApomQ9Z1R3 190 aa12.36□□□□□ -0.43
Trim39-203ENSMUST00000113706 Igkv1-133A0A0B4J1H8 120 aa12.36□□□□□ -0.43
Trim39-203ENSMUST00000113706 Gm5294J3QP53 216 aa12.36□□□□□ -0.43
Trim39-203ENSMUST00000113706 A930003A15RikQ3U552 87 aa12.36□□□□□ -0.43
Trim39-203ENSMUST00000113706 Ndufv3Q8BK30 104 aaKnown RBP12.36□□□□□ -0.43
Trim39-203ENSMUST00000113706 Ebi3O35228 228 aa12.35□□□□□ -0.43
Trim39-203ENSMUST00000113706 RhogP84096 191 aa12.35□□□□□ -0.43
Trim39-203ENSMUST00000113706 Olfr1243Q8VGM7 305 aa12.35□□□□□ -0.43
Trim39-203ENSMUST00000113706 Zfp53Q9Z117 652 aa12.35□□□□□ -0.43
Trim39-203ENSMUST00000113706 Edn2P22389 175 aa12.35□□□□□ -0.43
Trim39-203ENSMUST00000113706 CtsgP28293 261 aa12.35□□□□□ -0.43
Trim39-203ENSMUST00000113706 Prr9Q8BV84 116 aa12.35□□□□□ -0.43
Trim39-203ENSMUST00000113706 Prelid1Q8R107 217 aa12.35□□□□□ -0.43
Trim39-203ENSMUST00000113706 Ighv1-58A0A075B5W9 117 aa12.35□□□□□ -0.43
Trim39-203ENSMUST00000113706 Zfp979A2A799 407 aa12.35□□□□□ -0.43
Trim39-203ENSMUST00000113706 Gm12886B1AZM5 119 aa12.35□□□□□ -0.43
Trim39-203ENSMUST00000113706 Gm17727E9Q4V7 109 aa12.35□□□□□ -0.43
Trim39-203ENSMUST00000113706 SeboxP70368 190 aa12.35□□□□□ -0.43
Trim39-203ENSMUST00000113706 Klhdc1Q80YG3 406 aa12.35□□□□□ -0.43
Trim39-203ENSMUST00000113706 TirapQ99JY1 241 aa12.35□□□□□ -0.43
Trim39-203ENSMUST00000113706 Trav14n-3A0A075B645 120 aa12.34□□□□□ -0.43
Trim39-203ENSMUST00000113706 Gsx1P31315 261 aa12.34□□□□□ -0.43
Trim39-203ENSMUST00000113706 Hist1h1tQ07133 208 aa12.34□□□□□ -0.43
Trim39-203ENSMUST00000113706 Olfr481Q8VGI5 312 aa12.34□□□□□ -0.43
Trim39-203ENSMUST00000113706 Gm14214V9GX35 225 aa12.34□□□□□ -0.43
Trim39-203ENSMUST00000113706 Trav9d-1A0A075B699 112 aa12.34□□□□□ -0.43
Trim39-203ENSMUST00000113706 P01643 108 aa12.34□□□□□ -0.43
Trim39-203ENSMUST00000113706 Olfr1419Q7TQS2 343 aa12.34□□□□□ -0.43
Trim39-203ENSMUST00000113706 Olfr1404Q8VGE1 313 aa12.34□□□□□ -0.43
Trim39-203ENSMUST00000113706 Vmn1r149E9PWL6 307 aa12.33□□□□□ -0.43
Trim39-203ENSMUST00000113706 Vmn1r101E9Q365 307 aa12.33□□□□□ -0.43
Trim39-203ENSMUST00000113706 Vmn1r158G3UY92 307 aa12.33□□□□□ -0.43
Trim39-203ENSMUST00000113706 Klf12O35738 402 aa12.33□□□□□ -0.43
Trim39-203ENSMUST00000113706 Gm10842Q3U587 122 aa12.33□□□□□ -0.43
Trim39-203ENSMUST00000113706 Bud31Q6PGH1 103 aa12.33□□□□□ -0.43
Trim39-203ENSMUST00000113706 Scgb1b10A0A087WPW0 93 aa12.33□□□□□ -0.44
Trim39-203ENSMUST00000113706 Gm9913Q8BQQ2 135 aa12.33□□□□□ -0.44
Trim39-203ENSMUST00000113706 Olfr1336Q8VGH5 314 aa12.33□□□□□ -0.44
Trim39-203ENSMUST00000113706 LfngO09010 378 aa12.33□□□□□ -0.44
Trim39-203ENSMUST00000113706 Tmem11Q8BK08 190 aa12.33□□□□□ -0.44
Trim39-203ENSMUST00000113706 Tmed6Q9CQG0 239 aa12.33□□□□□ -0.44
Trim39-203ENSMUST00000113706 Cxcl14Q9WUQ5 99 aa12.33□□□□□ -0.44
Trim39-203ENSMUST00000113706 Bahcc1Q3UHR0 2643 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Tcrg-C2A0A075B5Z2 167 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Ms4a12A0A087WSB9 263 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Gm5819E9PZ96 154 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 P01853 167 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Mfge8P21956 463 aaKnown RBP12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Saa4P31532 130 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Rpl19P84099 196 aaKnown RBP12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Txn2P97493 166 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Olfr745Q7TRL9 328 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Tmem52Q9D702 196 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Col7a1Q63870 2944 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Ly6lH3BJG9 140 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Gm21874J3QNZ6 232 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Ccl6P27784 116 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Fbxl15Q91W61 300 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Scgb1b27Q91WB5 92 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Col8a1Q00780 744 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Olfr1373Q7TQT6 311 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Olfr873Q8VFJ0 319 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Znhit3Q9CQK1 151 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Fam162bQ9CX19 157 aa12.32□□□□□ -0.44
Trim39-203ENSMUST00000113706 Gm3072F6SKY8 209 aa12.31□□□□□ -0.44
Trim39-203ENSMUST00000113706 Gm17654F7AXR3 209 aa12.31□□□□□ -0.44
Trim39-203ENSMUST00000113706 Defa-rs1P17533 116 aa12.31□□□□□ -0.44
Trim39-203ENSMUST00000113706 Adrb3P25962 400 aa12.31□□□□□ -0.44
Trim39-203ENSMUST00000113706 CebpgP53568 150 aa12.31□□□□□ -0.44
Trim39-203ENSMUST00000113706 Olfr1209Q3SXJ3 310 aa12.31□□□□□ -0.44
Trim39-203ENSMUST00000113706 Q8C3M9 231 aa12.31□□□□□ -0.44
Trim39-203ENSMUST00000113706 Necap1Q9CR95 275 aa12.31□□□□□ -0.44
Trim39-203ENSMUST00000113706 Timm10bQ9WV96 100 aa12.31□□□□□ -0.44
Trim39-203ENSMUST00000113706 Ighv1-4A0A075B5T4 117 aa12.31□□□□□ -0.44
Trim39-203ENSMUST00000113706 Ighv7-4A0A0A6YXL5 121 aa12.31□□□□□ -0.44
Trim39-203ENSMUST00000113706 Zfp930A0A1D5RM15 441 aa12.31□□□□□ -0.44
Trim39-203ENSMUST00000113706 Vmn1r232A2RTT5 351 aa12.31□□□□□ -0.44
Trim39-203ENSMUST00000113706 Olfr715bE9Q725 315 aa12.31□□□□□ -0.44
Trim39-203ENSMUST00000113706 Tcf21O35437 179 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms