RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Olfr262Q8VFV8 312 aa17.58■□□□□ 0.41
Scn1b-201ENSMUST00000098548 ApomQ9Z1R3 190 aa17.58■□□□□ 0.41
Scn1b-201ENSMUST00000098548 IgipA0A1B0GR74 53 aa17.57■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Gm12886B1AZM5 119 aa17.57■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Gm933J3QPC1 141 aa17.57■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Ebi3O35228 228 aa17.57■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Ube2g1P62254 170 aa17.57■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Tas2r114Q7M722 309 aa17.57■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Pde6hP61249 83 aa17.57■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Olfr1246Q7TQZ6 314 aa17.57■□□□□ 0.4
Scn1b-201ENSMUST00000098548 RetnlgQ8K426 117 aa17.57■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Trav9-1A0A075B601 112 aa17.56■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Ccdc71lE9Q4T4 218 aa17.56■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Sprr3O09116 238 aa17.56■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Foxh1O88621 401 aa17.56■□□□□ 0.4
Scn1b-201ENSMUST00000098548 MgpP19788 104 aa17.56■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Meox2P32443 303 aa17.56■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Q8C3M9 231 aa17.56■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Ighv1-4A0A075B5T4 117 aa17.55■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Esp34G3UXG0 151 aa17.55■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Ly6lH3BJG9 140 aa17.55■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Gm6871L7N248 545 aa17.55■□□□□ 0.4
Scn1b-201ENSMUST00000098548 P01792 123 aa17.55■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Crip1P63254 77 aa17.55■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Smrp1Q2MH31 260 aa17.55■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Q3UUX7 111 aa17.55■□□□□ 0.4
Scn1b-201ENSMUST00000098548 OstcQ78XF5 149 aa17.55■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Slc25a48Q8BW66 306 aa17.55■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Gm21834J3QN05 151 aa17.54■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Ins2P01326 110 aa17.54■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Lgals1P16045 135 aaKnown RBP17.54■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Olfr553Q7TRS6 326 aa17.54■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Samd10Q7TST3 202 aa17.54■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Bex1Q9R224 128 aa17.54■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Gm17727E9Q4V7 109 aa17.53■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Tac3P55099 116 aa17.53■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Cnn1Q08091 297 aaKnown RBP17.53■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Tmem11Q8BK08 190 aa17.53■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Fbxl15Q91W61 300 aa17.53■□□□□ 0.4
Scn1b-201ENSMUST00000098548 GgctQ9D7X8 188 aa17.53■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Slc25a39Q9D8K8 359 aa17.53■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Xirp2Q4U4S6 3784 aa17.53■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Gm9767G3X930 207 aa17.53■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Ly86O88188 162 aa17.53■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Usmg5Q78IK2 58 aa17.53■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Mrpl16Q99N93 251 aa17.53■□□□□ 0.4
Scn1b-201ENSMUST00000098548 Gm9047B9EJX3 177 aa17.52■□□□□ 0.39
Scn1b-201ENSMUST00000098548 P01820 115 aa17.52■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Pfn1P62962 140 aa17.52■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Psg25Q497W1 475 aa17.52■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Gm10334Q792Y8 246 aa17.52■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Stxbp6Q8R3T5 210 aa17.52■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Olfr1336Q8VGH5 314 aa17.52■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Zfp53Q9Z117 652 aa17.52■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Samt1A2BED8 237 aa17.51■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Ccl1P10146 92 aa17.51■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Msrb3Q8BU85 253 aa17.51■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Cd99Q8VCN6 175 aa17.51■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Zfp114B2RRA8 586 aa17.5■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Gm6970F7DCP6 221 aa17.5■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Dppa1Q810Y7 116 aa17.5■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Igkv4-90A0A075B5L3 117 aa17.49■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Trbv1A0A0B4J1G7 116 aa17.49■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Trav7-1A0A0G2JEV5 112 aa17.49■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Tdgf1P51865 171 aa17.49■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Bpifb3Q80ZU7 473 aa17.49■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Olfr1009Q8VFK1 314 aa17.49■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Ighv1-74A0A0G2JGK2 117 aa17.49■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Zfp983E9PUT0 460 aa17.49■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Olfr1116E9PXB8 307 aa17.49■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Ascl2O35885 263 aa17.49■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Gm10226O88253 85 aa17.49■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Gnb4P29387 340 aa17.49■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Olfr1030Q8VFL5 318 aa17.49■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Glrx2Q923X4 156 aa17.49■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Nhp2Q9CRB2 153 aaKnown RBP17.49■□□□□ 0.39
Scn1b-201ENSMUST00000098548 AhspQ9CY02 102 aa17.49■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Spaca3Q9D9X8 221 aa17.49■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Znf580Q9DB38 172 aa17.49■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Ighv1-16A0A075B5U1 98 aa17.48■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Ighv1-22A0A075B5U7 117 aa17.48■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Trav7-5A0A0G2JFX6 112 aa17.48■□□□□ 0.39
Scn1b-201ENSMUST00000098548 AU041133A0A0J9YVH3 498 aa17.48■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Cd81P35762 236 aa17.48■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Gm10447Q3UQ92 135 aa17.48■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Obox7Q4KL20 218 aa17.48■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Olfr509Q8VF20 321 aa17.48■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Mgst1Q91VS7 155 aa17.48■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Stard4Q99JV5 224 aa17.48■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Gpr35Q9ES90 307 aa17.48■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Olfr1369-ps1A0A140T8K7 317 aa17.47■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Adam8Q05910 826 aa17.47■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Smim7Q5RKS2 75 aa17.47■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Olfr150Q60895 312 aa17.47■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Prss3Q792Z0 246 aaKnown RBP17.47■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Mrps10Q80ZK0 160 aaKnown RBP17.47■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Fam210aQ8BGY7 273 aa17.47■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Immp2lQ8BPT6 175 aa17.47■□□□□ 0.39
Scn1b-201ENSMUST00000098548 Oraov1Q8CH62 137 aa17.47■□□□□ 0.39
Scn1b-201ENSMUST00000098548 RetnlaQ9EP95 111 aa17.47■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms