RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Flg2Q2VIS4 2362 aa11.77□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Gm15128A2ADW8 449 aa11.77□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Gm15080A2BI02 449 aa11.77□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Gm15093A2BI72 449 aa11.77□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Luzp4B1AV09 449 aa11.77□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Gm15107B1B0X0 449 aa11.77□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Rtl10D3YWW5 146 aa11.77□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Gm15097E9QA14 449 aa11.77□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Gm15085Q62012 449 aa11.77□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Tff3Q62395 81 aa11.77□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Olfr1242Q8VGM6 306 aa11.77□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Rabac1Q9Z0S9 185 aa11.77□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Tcf20Q9EPQ8 1987 aa11.76□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Trav9-1A0A075B601 112 aa11.76□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 TfpiO54819 306 aa11.76□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 P01791 123 aa11.76□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 V1rd19Q3KNP5 305 aa11.76□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Insig2Q91WG1 225 aa11.76□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Chchd5Q9CQP3 110 aa11.76□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Hspb8Q9JK92 196 aa11.76□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Med12lQ8BQM9 2157 aa11.76□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Gm7173A0A0G2JEB6 3132 aa11.76□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Htr1dQ61224 374 aa11.76□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Rnase2aQ8K196 155 aa11.76□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Lyzl1Q9CPX3 148 aa11.76□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Fxyd4Q9D2W0 88 aa11.76□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Crybb3Q9JJU9 211 aa11.76□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Zfhx2Q2MHN3 2562 aa11.75□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 TracA0A075B662 137 aa11.75□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Trav14n-2A0A0G2JDF5 121 aa11.75□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Olfr1192-ps1A0A1L1SRD7 309 aa11.75□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Tarm1B6A8R8 288 aa11.75□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 P0C1Z5 52 aa11.75□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 SbpP15501 199 aa11.75□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Try10Q792Z1 246 aaKnown RBP11.75□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Saa3P04918 122 aa11.75□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Dnajc30P59041 219 aa11.75□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Gm10645Q3UPY1 145 aa11.75□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Gm10604Q3V0X7 143 aa11.75□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Arl6ip6Q8BH07 226 aa11.75□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Rchy1Q9CR50 261 aa11.75□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Plekhb2Q9QZC7 221 aa11.75□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 NacaP70670 2187 aaKnown RBP11.74□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Ighv1-7A0A075B5T7 117 aa11.74□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Ighv9-1A0A0B4J1P3 117 aa11.74□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 RbpjP31266 526 aa11.74□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Defb28Q3V2L0 89 aa11.74□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Ndufc2Q9CQ54 120 aa11.74□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Mcrip2Q9CQB2 160 aaKnown RBP11.74□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Tppp3Q9CRB6 176 aaKnown RBP11.74□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 DscamQ9ERC8 2013 aa11.74□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 DysfQ9ESD7 2090 aa11.74□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 H2-DMb1P35737 261 aa11.74□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Gimap1P70224 277 aa11.74□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Tstd1E9PY03 133 aa11.73□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Sub1P11031 127 aaKnown RBP11.73□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Prop1P97458 223 aa11.73□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Igkv19-93A0A0G2JFZ3 115 aa11.72□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Zfp983E9PUT0 460 aa11.72□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Rnd1Q8BLR7 232 aa11.72□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Olfr1256Q8VGP1 306 aa11.72□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 AhspQ9CY02 102 aa11.72□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 GlmpQ9JHJ3 404 aa11.72□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Gm21983D6RFS9 131 aa11.72□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Ca2P00920 260 aaKnown RBP11.72□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Mamld1P0C6A2 803 aa11.72□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Defa-rs7P50715 91 aa11.72□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Rpl24Q8BP67 157 aaKnown RBP11.72□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 UrahQ9CRB3 118 aa11.72□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Mrpl53Q9D1H8 118 aaKnown RBP11.72□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Gnb1lQ9EQ15 326 aa11.72□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Tmem160Q9D938 188 aa11.71□□□□□ -0.53
Ushbp1-201ENSMUST00000049184 Tmem141A2AJB2 108 aa11.71□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Bsph2Q0Q236 131 aa11.71□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Dlx1Q64317 255 aa11.71□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Ppp1r3cQ7TMB3 317 aa11.71□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Olfr211Q8VGH2 309 aa11.71□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Tctex1d1Q9D5I4 173 aa11.71□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Slc25a20Q9Z2Z6 301 aaKnown RBP11.71□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 H2al2bA9Z055 111 aa11.7□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Fam206aQ80ZQ9 193 aaKnown RBP11.7□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Gm9949Q8C9F4 104 aa11.7□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Srd5a2Q99N99 254 aa11.7□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Tpsg1Q9QUL7 311 aa11.7□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Dmxl1Q6PNC0 3013 aa11.7□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Ighv14-3A0A075B5R9 117 aa11.7□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Olfr1185-ps1F6XP16 303 aa11.7□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 P01896 185 aa11.7□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Cd27P41272 250 aa11.7□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Lyg1Q9D7Q0 197 aa11.7□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Dnajb12Q9QYI4 376 aaKnown RBP11.7□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Vps13cQ8BX70 3748 aa11.69□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Awat1A2ADU9 328 aa11.69□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Zcchc24B2RVL6 241 aaKnown RBP11.69□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Bak1O08734 209 aa11.69□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Sap30O88574 220 aa11.69□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Crip3Q6Q6R3 243 aa11.69□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Erg28Q9ERY9 140 aa11.69□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Trdv1A0A075B657 112 aa11.69□□□□□ -0.54
Ushbp1-201ENSMUST00000049184 Ighv8-8A0A0A6YXQ0 119 aa11.69□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 98.3 ms