RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 H3BT86 120 aa10.99□□□□□ -0.65
PHGDH-216ENST00000641375 TRBV30A0A0K0K1B3 111 aa10.99□□□□□ -0.65
PHGDH-216ENST00000641375 A0A1B0GX51 115 aa10.99□□□□□ -0.65
PHGDH-216ENST00000641375 SND1-IT1Q9HBX3 110 aa10.99□□□□□ -0.65
PHGDH-216ENST00000641375 ZNF561-AS1K7EIQ3 104 aa10.98□□□□□ -0.65
PHGDH-216ENST00000641375 MUC7Q8TAX7 377 aa10.98□□□□□ -0.65
PHGDH-216ENST00000641375 C6orf223Q8N319 242 aa10.97□□□□□ -0.65
PHGDH-216ENST00000641375 C3orf22Q8N5N4 141 aa10.97□□□□□ -0.65
PHGDH-216ENST00000641375 DNHD1Q96M86 4753 aa10.97□□□□□ -0.65
PHGDH-216ENST00000641375 GVQW2A0A096LPI5 108 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-216ENST00000641375 NUPR2A6NF83 97 aa10.96□□□□□ -0.65
PHGDH-216ENST00000641375 UNQ6190/PRO20217Q6UXQ8 127 aa10.96□□□□□ -0.65
PHGDH-216ENST00000641375 Q9HAA7 133 aa10.96□□□□□ -0.65
PHGDH-216ENST00000641375 APLNQ9ULZ1 77 aa10.96□□□□□ -0.65
PHGDH-216ENST00000641375 TRAV13-2A0A0B4J235 113 aa10.96□□□□□ -0.66
PHGDH-216ENST00000641375 J3KT08 172 aa10.96□□□□□ -0.66
PHGDH-216ENST00000641375 LINC00526Q96FQ7 95 aa10.96□□□□□ -0.66
PHGDH-216ENST00000641375 COX6CP09669 75 aa10.95□□□□□ -0.66
PHGDH-216ENST00000641375 RMI2Q96E14 147 aa10.95□□□□□ -0.66
PHGDH-216ENST00000641375 UQCRQO14949 82 aa10.94□□□□□ -0.66
PHGDH-216ENST00000641375 C10orf25Q5T742 122 aa10.94□□□□□ -0.66
PHGDH-216ENST00000641375 C9orf153Q5TBE3 101 aa10.94□□□□□ -0.66
PHGDH-216ENST00000641375 RPS28P62857 69 aaKnown RBP10.94□□□□□ -0.66
PHGDH-216ENST00000641375 C9orf116Q5BN46 136 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-216ENST00000641375 C15orf56Q8N910 161 aa10.94□□□□□ -0.66
PHGDH-216ENST00000641375 MEGF8Q7Z7M0 2845 aa10.93□□□□□ -0.66
PHGDH-216ENST00000641375 TRIAP1O43715 76 aa10.93□□□□□ -0.66
PHGDH-216ENST00000641375 ACYP1P07311 99 aa10.93□□□□□ -0.66
PHGDH-216ENST00000641375 C2orf48Q96LS8 159 aa10.93□□□□□ -0.66
PHGDH-216ENST00000641375 PRKDCP78527 4128 aaKnown RBP10.93□□□□□ -0.66
PHGDH-216ENST00000641375 F8WDY8 70 aa10.93□□□□□ -0.66
PHGDH-216ENST00000641375 HIGD2BQ4VC39 106 aa10.93□□□□□ -0.66
PHGDH-216ENST00000641375 UBE2DNLQ8IWF7 75 aa10.93□□□□□ -0.66
PHGDH-216ENST00000641375 CAMK2N2Q96S95 79 aa10.93□□□□□ -0.66
PHGDH-216ENST00000641375 IGKV2-28A0A075B6P5 120 aa10.92□□□□□ -0.66
PHGDH-216ENST00000641375 FAM236AA0A1B0GUQ0 79 aa10.92□□□□□ -0.66
PHGDH-216ENST00000641375 FAM236BA0A1B0GV22 79 aa10.92□□□□□ -0.66
PHGDH-216ENST00000641375 IGKV2D-28P01615 120 aa10.92□□□□□ -0.66
PHGDH-216ENST00000641375 DYNC2H1Q8NCM8 4307 aaKnown RBP10.91□□□□□ -0.66
PHGDH-216ENST00000641375 LINC00337Q8N6G1 96 aa10.9□□□□□ -0.66
PHGDH-216ENST00000641375 C6orf48Q9UBA6 75 aa10.9□□□□□ -0.66
PHGDH-216ENST00000641375 NDUFC2O95298 119 aa10.9□□□□□ -0.66
PHGDH-216ENST00000641375 FAM19A5Q7Z5A7 132 aaPredicted RBP10.89□□□□□ -0.67
PHGDH-216ENST00000641375 OR13C6PQ8NH95 151 aa10.89□□□□□ -0.67
PHGDH-216ENST00000641375 LOC107984640A0A0U1RRK4 108 aa10.88□□□□□ -0.67
PHGDH-216ENST00000641375 CSMD3Q7Z407 3707 aa10.87□□□□□ -0.67
PHGDH-216ENST00000641375 Q6ZRU5 148 aa10.86□□□□□ -0.67
PHGDH-216ENST00000641375 LINC00643Q86TS7 51 aa10.86□□□□□ -0.67
PHGDH-216ENST00000641375 LST1O00453 97 aa10.86□□□□□ -0.67
PHGDH-216ENST00000641375 RPL28P46779 137 aaKnown RBP10.85□□□□□ -0.67
PHGDH-216ENST00000641375 DNAH1Q9P2D7 4330 aa10.85□□□□□ -0.67
PHGDH-216ENST00000641375 CRYGAP11844 174 aa10.84□□□□□ -0.67
PHGDH-216ENST00000641375 COX7CP15954 63 aa10.84□□□□□ -0.67
PHGDH-216ENST00000641375 SYCNQ0VAF6 134 aa10.84□□□□□ -0.67
PHGDH-216ENST00000641375 LYSTQ99698 3801 aa10.84□□□□□ -0.67
PHGDH-216ENST00000641375 DNAH7Q8WXX0 4024 aa10.83□□□□□ -0.68
PHGDH-216ENST00000641375 USP17L23D6RBM5 183 aa10.83□□□□□ -0.68
PHGDH-216ENST00000641375 SDIM1Q6ZPB5 146 aa10.83□□□□□ -0.68
PHGDH-216ENST00000641375 NDUFC2-KCTD14E9PQ53 114 aa10.82□□□□□ -0.68
PHGDH-216ENST00000641375 KRTAP1-5Q9BYS1 174 aa10.82□□□□□ -0.68
PHGDH-216ENST00000641375 GAGE2AQ6NT46 116 aa10.81□□□□□ -0.68
PHGDH-216ENST00000641375 SMIM11BQ8TCY0 68 aa10.81□□□□□ -0.68
PHGDH-216ENST00000641375 CLEC2BQ92478 149 aa10.81□□□□□ -0.68
PHGDH-216ENST00000641375 CASC10Q5T4H9 136 aa10.8□□□□□ -0.68
PHGDH-216ENST00000641375 PRR3P79522 188 aaKnown RBP10.79□□□□□ -0.68
PHGDH-216ENST00000641375 TENM2Q9NT68 2774 aa10.79□□□□□ -0.68
PHGDH-216ENST00000641375 XAGE1AQ9HD64 81 aa10.79□□□□□ -0.68
PHGDH-216ENST00000641375 Q8NDZ9 215 aa10.77□□□□□ -0.68
PHGDH-216ENST00000641375 H0YGX0 51 aa10.77□□□□□ -0.69
PHGDH-216ENST00000641375 ATOX1O00244 68 aa10.77□□□□□ -0.69
PHGDH-216ENST00000641375 NCR3O14931 201 aa10.77□□□□□ -0.69
PHGDH-216ENST00000641375 PSCAO43653 123 aa10.77□□□□□ -0.69
PHGDH-216ENST00000641375 HIST1H4AP62805 103 aaKnown RBP10.77□□□□□ -0.69
PHGDH-216ENST00000641375 S100A7L2Q5SY68 101 aa10.77□□□□□ -0.69
PHGDH-216ENST00000641375 SMCR5Q8TEV8 140 aa10.77□□□□□ -0.69
PHGDH-216ENST00000641375 TLX1NBP0CAT3 122 aa10.76□□□□□ -0.69
PHGDH-216ENST00000641375 PLECQ15149 4684 aaKnown RBP10.75□□□□□ -0.69
PHGDH-216ENST00000641375 NBDYA0A0U1RRE5 68 aa10.75□□□□□ -0.69
PHGDH-216ENST00000641375 TMEM258P61165 79 aa10.75□□□□□ -0.69
PHGDH-216ENST00000641375 Q6ZRP5 223 aa10.75□□□□□ -0.69
PHGDH-216ENST00000641375 TRACP01848 142 aa10.75□□□□□ -0.69
PHGDH-216ENST00000641375 LECT2O14960 151 aa10.74□□□□□ -0.69
PHGDH-216ENST00000641375 SLPIP03973 132 aa10.74□□□□□ -0.69
PHGDH-216ENST00000641375 RPL18AQ02543 176 aaKnown RBP10.73□□□□□ -0.69
PHGDH-216ENST00000641375 DPH3Q96FX2 82 aa10.72□□□□□ -0.69
PHGDH-216ENST00000641375 IGLV6-57P01721 117 aa10.72□□□□□ -0.69
PHGDH-216ENST00000641375 STARD9Q9P2P6 4700 aa10.71□□□□□ -0.69
PHGDH-216ENST00000641375 VPREB1P12018 145 aa10.71□□□□□ -0.69
PHGDH-216ENST00000641375 C14orf177Q52M58 125 aa10.71□□□□□ -0.69
PHGDH-216ENST00000641375 FAM218AQ96MZ4 157 aa10.71□□□□□ -0.69
PHGDH-216ENST00000641375 FBN3Q75N90 2809 aa10.71□□□□□ -0.69
PHGDH-216ENST00000641375 hADV29S1A0JD25 119 aa10.69□□□□□ -0.7
PHGDH-216ENST00000641375 M0R378 163 aa10.68□□□□□ -0.7
PHGDH-216ENST00000641375 C9orf129Q5T035 196 aaKnown RBP10.68□□□□□ -0.7
PHGDH-216ENST00000641375 DNAL4O96015 105 aa10.67□□□□□ -0.7
PHGDH-216ENST00000641375 TRBV10-3A0A0K0K1G6 114 aa10.67□□□□□ -0.7
PHGDH-216ENST00000641375 INAFM2P0DMQ5 153 aa10.67□□□□□ -0.7
PHGDH-216ENST00000641375 CNBPP62633 177 aaKnown RBP10.67□□□□□ -0.7
PHGDH-216ENST00000641375 A0A087WYN8 130 aa10.66□□□□□ -0.7
PHGDH-216ENST00000641375 C6orf99Q4VX62 202 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms