RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 SLPIP03973 132 aa3.9□□□□□ -1.79
SCN3A-210ENST00000640652 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.9□□□□□ -1.79
SCN3A-210ENST00000640652 HIGD2BQ4VC39 106 aa3.9□□□□□ -1.79
SCN3A-210ENST00000640652 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.9□□□□□ -1.79
SCN3A-210ENST00000640652 FAM218AQ96MZ4 157 aa3.9□□□□□ -1.79
SCN3A-210ENST00000640652 TRBV10-3A0A0K0K1G6 114 aa3.89□□□□□ -1.79
SCN3A-210ENST00000640652 CRYGAP11844 174 aa3.89□□□□□ -1.79
SCN3A-210ENST00000640652 IGKV2-28A0A075B6P5 120 aa3.89□□□□□ -1.79
SCN3A-210ENST00000640652 F8WDY8 70 aa3.89□□□□□ -1.79
SCN3A-210ENST00000640652 EIF4EBP3O60516 100 aaPredicted RBP3.89□□□□□ -1.79
SCN3A-210ENST00000640652 IGKV2D-28P01615 120 aa3.89□□□□□ -1.79
SCN3A-210ENST00000640652 CSMD2Q7Z408 3487 aa3.89□□□□□ -1.79
SCN3A-210ENST00000640652 IGKV2D-24A0A075B6R9 120 aa3.89□□□□□ -1.79
SCN3A-210ENST00000640652 IGHV4-28A0A0C4DH34 117 aa3.89□□□□□ -1.79
SCN3A-210ENST00000640652 DEFB4AO15263 64 aa3.89□□□□□ -1.79
SCN3A-210ENST00000640652 CSNK1G2-AS1Q8NCQ2 148 aa3.89□□□□□ -1.79
SCN3A-210ENST00000640652 TENM3Q9P273 2699 aa3.89□□□□□ -1.79
SCN3A-210ENST00000640652 CXCL6P80162 114 aa3.89□□□□□ -1.79
SCN3A-210ENST00000640652 ESM1Q9NQ30 184 aa3.89□□□□□ -1.79
SCN3A-210ENST00000640652 PKD1L1Q8TDX9 2849 aa3.88□□□□□ -1.79
SCN3A-210ENST00000640652 TRBV7-6A0A0J9YX20 115 aa3.88□□□□□ -1.79
SCN3A-210ENST00000640652 NREPQ16612 68 aa3.88□□□□□ -1.79
SCN3A-210ENST00000640652 C3orf56Q8N813 242 aa3.88□□□□□ -1.79
SCN3A-210ENST00000640652 FAM236DA0A1B0GTK5 79 aa3.87□□□□□ -1.79
SCN3A-210ENST00000640652 FAM236CP0DP71 79 aa3.87□□□□□ -1.79
SCN3A-210ENST00000640652 CYSRT1A8MQ03 144 aa3.87□□□□□ -1.79
SCN3A-210ENST00000640652 NHLRC4P0CG21 123 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-210ENST00000640652 KRTAP10-9P60411 292 aa3.87□□□□□ -1.79
SCN3A-210ENST00000640652 FAM104AQ969W3 186 aa3.87□□□□□ -1.79
SCN3A-210ENST00000640652 LOC110117498A0A087WWA1 95 aa3.87□□□□□ -1.79
SCN3A-210ENST00000640652 ZNF469Q96JG9 3925 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-210ENST00000640652 LINC00846Q9NV44 126 aa3.87□□□□□ -1.79
SCN3A-210ENST00000640652 CUBNO60494 3623 aa3.87□□□□□ -1.79
SCN3A-210ENST00000640652 LINC00575Q6W349 94 aa3.87□□□□□ -1.79
SCN3A-210ENST00000640652 Q6ZQY7 126 aa3.87□□□□□ -1.79
SCN3A-210ENST00000640652 LINC00482Q8N8I6 264 aa3.87□□□□□ -1.79
SCN3A-210ENST00000640652 DHRS4-AS1Q9P1J3 65 aa3.87□□□□□ -1.79
SCN3A-210ENST00000640652 M0R378 163 aa3.87□□□□□ -1.79
SCN3A-210ENST00000640652 ETDCA0A1B0GVM5 59 aa3.86□□□□□ -1.79
SCN3A-210ENST00000640652 C5orf47Q569G3 176 aa3.86□□□□□ -1.79
SCN3A-210ENST00000640652 RPS28P62857 69 aaKnown RBP3.86□□□□□ -1.79
SCN3A-210ENST00000640652 SMCR5Q8TEV8 140 aa3.86□□□□□ -1.79
SCN3A-210ENST00000640652 TRAV7A0A075B6U4 112 aa3.86□□□□□ -1.79
SCN3A-210ENST00000640652 EGFEM1PQ0D2K5 195 aa3.86□□□□□ -1.79
SCN3A-210ENST00000640652 C9orf116Q5BN46 136 aaPredicted RBP3.86□□□□□ -1.79
SCN3A-210ENST00000640652 PSCAO43653 123 aa3.85□□□□□ -1.79
SCN3A-210ENST00000640652 PRR3P79522 188 aaKnown RBP3.85□□□□□ -1.79
SCN3A-210ENST00000640652 C20orf197Q8N268 126 aa3.85□□□□□ -1.79
SCN3A-210ENST00000640652 OBSCN-AS1Q96MR7 158 aa3.85□□□□□ -1.79
SCN3A-210ENST00000640652 KPRPQ5T749 579 aaPredicted RBP3.85□□□□□ -1.79
SCN3A-210ENST00000640652 C2orf48Q96LS8 159 aa3.85□□□□□ -1.79
SCN3A-210ENST00000640652 PLAC8L1A1L4L8 177 aa3.84□□□□□ -1.79
SCN3A-210ENST00000640652 GIG44P09565 113 aaPredicted RBP3.84□□□□□ -1.79
SCN3A-210ENST00000640652 UNQ6190/PRO20217Q6UXQ8 127 aa3.84□□□□□ -1.79
SCN3A-210ENST00000640652 XAGE1AQ9HD64 81 aa3.84□□□□□ -1.79
SCN3A-210ENST00000640652 BPY2O14599 106 aa3.84□□□□□ -1.79
SCN3A-210ENST00000640652 IGLV6-57P01721 117 aa3.84□□□□□ -1.79
SCN3A-210ENST00000640652 BCE1O60756 84 aa3.84□□□□□ -1.79
SCN3A-210ENST00000640652 LOC107984640A0A0U1RRK4 108 aa3.84□□□□□ -1.8
SCN3A-210ENST00000640652 A0A1B0GW54 56 aa3.84□□□□□ -1.8
SCN3A-210ENST00000640652 LINC01547P58512 204 aaPredicted RBP3.84□□□□□ -1.8
SCN3A-210ENST00000640652 LINC00612Q8N6U2 182 aa3.84□□□□□ -1.8
SCN3A-210ENST00000640652 GVQW2A0A096LPI5 108 aaPredicted RBP3.83□□□□□ -1.8
SCN3A-210ENST00000640652 UBE2DNLQ8IWF7 75 aa3.83□□□□□ -1.8
SCN3A-210ENST00000640652 C11orf45Q8TAV5 145 aa3.83□□□□□ -1.8
SCN3A-210ENST00000640652 LINC00167Q96N53 147 aa3.83□□□□□ -1.8
SCN3A-210ENST00000640652 SERP1Q9Y6X1 66 aa3.83□□□□□ -1.8
SCN3A-210ENST00000640652 DEFB105AQ8NG35 78 aa3.83□□□□□ -1.8
SCN3A-210ENST00000640652 H3BNG1 76 aa3.83□□□□□ -1.8
SCN3A-210ENST00000640652 UBE2BP63146 152 aa3.83□□□□□ -1.8
SCN3A-210ENST00000640652 PLA2G2AP14555 144 aa3.83□□□□□ -1.8
SCN3A-210ENST00000640652 A0A087WVE0 104 aa3.82□□□□□ -1.8
SCN3A-210ENST00000640652 SYCNQ0VAF6 134 aa3.82□□□□□ -1.8
SCN3A-210ENST00000640652 Q6ZQT0 140 aa3.82□□□□□ -1.8
SCN3A-210ENST00000640652 FAM19A5Q7Z5A7 132 aaPredicted RBP3.82□□□□□ -1.8
SCN3A-210ENST00000640652 X6R8D5 127 aa3.82□□□□□ -1.8
SCN3A-210ENST00000640652 A0A0J9YWU9 116 aa3.82□□□□□ -1.8
SCN3A-210ENST00000640652 IGHV4-30-4P0DP06 118 aa3.82□□□□□ -1.8
SCN3A-210ENST00000640652 C14orf177Q52M58 125 aa3.82□□□□□ -1.8
SCN3A-210ENST00000640652 TGP01266 2768 aa3.82□□□□□ -1.8
SCN3A-210ENST00000640652 NDUFB1O75438 58 aa3.82□□□□□ -1.8
SCN3A-210ENST00000640652 MP68P56378 58 aa3.82□□□□□ -1.8
SCN3A-210ENST00000640652 PRYO14603 147 aa3.81□□□□□ -1.8
SCN3A-210ENST00000640652 ELOF1P60002 83 aaKnown RBP3.81□□□□□ -1.8
SCN3A-210ENST00000640652 C6orf223Q8N319 242 aa3.81□□□□□ -1.8
SCN3A-210ENST00000640652 Q8N3U1 123 aa3.81□□□□□ -1.8
SCN3A-210ENST00000640652 MRAPQ8TCY5 172 aa3.81□□□□□ -1.8
SCN3A-210ENST00000640652 DEFB131BA0A096LNP1 70 aa3.81□□□□□ -1.8
SCN3A-210ENST00000640652 TRRAPQ9Y4A5 3859 aa3.81□□□□□ -1.8
SCN3A-210ENST00000640652 WFDC9Q8NEX5 89 aa3.81□□□□□ -1.8
SCN3A-210ENST00000640652 C19orf73Q9NVV2 129 aa3.81□□□□□ -1.8
SCN3A-210ENST00000640652 INAFM1C9JVW0 142 aa3.8□□□□□ -1.8
SCN3A-210ENST00000640652 LYPD5Q6UWN5 251 aa3.8□□□□□ -1.8
SCN3A-210ENST00000640652 C3orf84H3BNL1 204 aa3.8□□□□□ -1.8
SCN3A-210ENST00000640652 Q6ZVQ6 151 aa3.8□□□□□ -1.8
SCN3A-210ENST00000640652 Q8NAQ8 132 aa3.8□□□□□ -1.8
SCN3A-210ENST00000640652 FAM19A1Q7Z5A9 133 aa3.8□□□□□ -1.8
SCN3A-210ENST00000640652 DPH3Q96FX2 82 aa3.79□□□□□ -1.8
SCN3A-210ENST00000640652 C6orf48Q9UBA6 75 aa3.79□□□□□ -1.8
SCN3A-210ENST00000640652 TENM2Q9NT68 2774 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms