RNA–Protein interactions for RNA: ENST00000640476.1

CROCCP2-207, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 1,750 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-207ENST00000640476 HERV-K104P63124 156 aa13.04□□□□□ -0.32
CROCCP2-207ENST00000640476 PGPEP1Q9NXJ5 209 aa13.04□□□□□ -0.32
CROCCP2-207ENST00000640476 DYNC1H1Q14204 4646 aaKnown RBP13.04□□□□□ -0.32
CROCCP2-207ENST00000640476 LRP1BQ9NZR2 4599 aa13.04□□□□□ -0.32
CROCCP2-207ENST00000640476 EPPK1P58107 5090 aaKnown RBP13.04□□□□□ -0.32
CROCCP2-207ENST00000640476 A4D1N5 150 aa13.04□□□□□ -0.32
CROCCP2-207ENST00000640476 IFITM1P13164 125 aa13.04□□□□□ -0.32
CROCCP2-207ENST00000640476 PFN2P35080 140 aa13.03□□□□□ -0.32
CROCCP2-207ENST00000640476 PRO1854Q9UHT4 67 aa13.03□□□□□ -0.32
CROCCP2-207ENST00000640476 IGLV5-52A0A0A0MRZ9 124 aa13.02□□□□□ -0.32
CROCCP2-207ENST00000640476 A0A0B4J2C4 111 aa13.02□□□□□ -0.32
CROCCP2-207ENST00000640476 ADAMTSL4-AS1Q5T5F5 129 aa13.02□□□□□ -0.32
CROCCP2-207ENST00000640476 CXCL5P42830 114 aa13.02□□□□□ -0.33
CROCCP2-207ENST00000640476 DAND5Q8N907 189 aa13.02□□□□□ -0.33
CROCCP2-207ENST00000640476 C9orf163Q8N9P6 203 aa13.01□□□□□ -0.33
CROCCP2-207ENST00000640476 TSPAN13O95857 204 aa12.99□□□□□ -0.33
CROCCP2-207ENST00000640476 LYRM7Q5U5X0 104 aa12.99□□□□□ -0.33
CROCCP2-207ENST00000640476 COPS9Q8WXC6 57 aa12.99□□□□□ -0.33
CROCCP2-207ENST00000640476 DNAH8Q96JB1 4490 aa12.99□□□□□ -0.33
CROCCP2-207ENST00000640476 Q6ZRP5 223 aa12.99□□□□□ -0.33
CROCCP2-207ENST00000640476 ERG28Q9UKR5 140 aa12.99□□□□□ -0.33
CROCCP2-207ENST00000640476 TRBV30A0A0K0K1B3 111 aa12.98□□□□□ -0.33
CROCCP2-207ENST00000640476 PANO1I0J062 215 aa12.98□□□□□ -0.33
CROCCP2-207ENST00000640476 MEIG1Q5JSS6 88 aa12.98□□□□□ -0.33
CROCCP2-207ENST00000640476 CHTF8P0CG12 524 aa12.97□□□□□ -0.33
CROCCP2-207ENST00000640476 GAGE2EQ4V326 116 aa12.97□□□□□ -0.33
CROCCP2-207ENST00000640476 SFTA2Q6UW10 78 aa12.97□□□□□ -0.33
CROCCP2-207ENST00000640476 SDIM1Q6ZPB5 146 aa12.97□□□□□ -0.33
CROCCP2-207ENST00000640476 GAGE2DQ9UEU5 116 aa12.97□□□□□ -0.33
CROCCP2-207ENST00000640476 EIF4EBP3O60516 100 aaPredicted RBP12.96□□□□□ -0.34
CROCCP2-207ENST00000640476 RPL18AQ02543 176 aaKnown RBP12.96□□□□□ -0.34
CROCCP2-207ENST00000640476 F8WDY8 70 aa12.95□□□□□ -0.34
CROCCP2-207ENST00000640476 LINC00158P58513 81 aa12.95□□□□□ -0.34
CROCCP2-207ENST00000640476 PPDPFQ9H3Y8 114 aa12.95□□□□□ -0.34
CROCCP2-207ENST00000640476 XAGE1AQ9HD64 81 aa12.95□□□□□ -0.34
CROCCP2-207ENST00000640476 A0A096LNI7 61 aa12.94□□□□□ -0.34
CROCCP2-207ENST00000640476 IGKV2-24A0A0C4DH68 120 aa12.94□□□□□ -0.34
CROCCP2-207ENST00000640476 KRTAP10-1P60331 282 aa12.94□□□□□ -0.34
CROCCP2-207ENST00000640476 NPC2P61916 151 aa12.94□□□□□ -0.34
CROCCP2-207ENST00000640476 GAGE2BQ13066 116 aa12.94□□□□□ -0.34
CROCCP2-207ENST00000640476 LOC107984156A0A0G2JMH3 177 aa12.93□□□□□ -0.34
CROCCP2-207ENST00000640476 NDUFC2-KCTD14E9PQ53 114 aa12.93□□□□□ -0.34
CROCCP2-207ENST00000640476 ARL17AQ8IVW1 177 aa12.93□□□□□ -0.34
CROCCP2-207ENST00000640476 MIR7-3HGQ8N6C7 128 aa12.93□□□□□ -0.34
CROCCP2-207ENST00000640476 RNF151Q2KHN1 245 aa12.92□□□□□ -0.34
CROCCP2-207ENST00000640476 LINC00308Q8TCZ7 52 aa12.92□□□□□ -0.34
CROCCP2-207ENST00000640476 FAM30AQ9NZY2 134 aa12.92□□□□□ -0.34
CROCCP2-207ENST00000640476 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.92□□□□□ -0.34
CROCCP2-207ENST00000640476 TRBV20-1A0A075B6N2 111 aa12.91□□□□□ -0.34
CROCCP2-207ENST00000640476 F8W1H4 67 aa12.91□□□□□ -0.34
CROCCP2-207ENST00000640476 LOC107984640A0A0U1RRK4 108 aa12.9□□□□□ -0.34
CROCCP2-207ENST00000640476 HAMPP81172 84 aa12.9□□□□□ -0.34
CROCCP2-207ENST00000640476 C9orf129Q5T035 196 aaKnown RBP12.9□□□□□ -0.34
CROCCP2-207ENST00000640476 TLX1NBP0CAT3 122 aa12.89□□□□□ -0.35
CROCCP2-207ENST00000640476 SND1-IT1Q9HBX3 110 aa12.89□□□□□ -0.35
CROCCP2-207ENST00000640476 FAM168BA1KXE4 195 aa12.89□□□□□ -0.35
CROCCP2-207ENST00000640476 H3BMG7 143 aa12.89□□□□□ -0.35
CROCCP2-207ENST00000640476 PSMB2P49721 201 aa12.89□□□□□ -0.35
CROCCP2-207ENST00000640476 SOSTDC1Q6X4U4 206 aa12.89□□□□□ -0.35
CROCCP2-207ENST00000640476 Q8NDZ9 215 aa12.89□□□□□ -0.35
CROCCP2-207ENST00000640476 C16orf90A8MZG2 172 aa12.88□□□□□ -0.35
CROCCP2-207ENST00000640476 SCGB1C2P0DMR2 95 aa12.88□□□□□ -0.35
CROCCP2-207ENST00000640476 APOBP04114 4563 aaKnown RBP12.87□□□□□ -0.35
CROCCP2-207ENST00000640476 COX17Q14061 63 aa12.87□□□□□ -0.35
CROCCP2-207ENST00000640476 Q1RN00 199 aa12.86□□□□□ -0.35
CROCCP2-207ENST00000640476 H7C2G1 150 aa12.85□□□□□ -0.35
CROCCP2-207ENST00000640476 KRTAP7-1Q8IUC3 87 aa12.85□□□□□ -0.35
CROCCP2-207ENST00000640476 OCIAD2Q56VL3 154 aa12.84□□□□□ -0.35
CROCCP2-207ENST00000640476 A0A1W2PNN7 141 aa12.83□□□□□ -0.36
CROCCP2-207ENST00000640476 PRR3P79522 188 aaKnown RBP12.83□□□□□ -0.36
CROCCP2-207ENST00000640476 SERTAD4-AS1Q5TG53 156 aa12.82□□□□□ -0.36
CROCCP2-207ENST00000640476 TCL1BO95988 128 aa12.81□□□□□ -0.36
CROCCP2-207ENST00000640476 SPACA4Q8TDM5 124 aa12.81□□□□□ -0.36
CROCCP2-207ENST00000640476 PRO0461Q9UI25 63 aa12.81□□□□□ -0.36
CROCCP2-207ENST00000640476 K7ERU9 68 aa12.81□□□□□ -0.36
CROCCP2-207ENST00000640476 COX6CP09669 75 aa12.81□□□□□ -0.36
CROCCP2-207ENST00000640476 DPH3Q96FX2 82 aa12.81□□□□□ -0.36
CROCCP2-207ENST00000640476 RPL13AP40429 203 aaKnown RBP12.8□□□□□ -0.36
CROCCP2-207ENST00000640476 FAM19A5Q7Z5A7 132 aaPredicted RBP12.79□□□□□ -0.36
CROCCP2-207ENST00000640476 A0A087WYN8 130 aa12.78□□□□□ -0.36
CROCCP2-207ENST00000640476 TRIAP1O43715 76 aa12.78□□□□□ -0.36
CROCCP2-207ENST00000640476 Q6ZSA8 131 aa12.78□□□□□ -0.36
CROCCP2-207ENST00000640476 ATXN8Q156A1 80 aa12.76□□□□□ -0.37
CROCCP2-207ENST00000640476 TRAV13-2A0A0B4J235 113 aa12.76□□□□□ -0.37
CROCCP2-207ENST00000640476 SCXQ7RTU7 201 aa12.74□□□□□ -0.37
CROCCP2-207ENST00000640476 CIRBP-AS1Q8TBR5 109 aa12.74□□□□□ -0.37
CROCCP2-207ENST00000640476 VPREB1P12018 145 aa12.74□□□□□ -0.37
CROCCP2-207ENST00000640476 KIAA1109Q2LD37 5005 aa12.73□□□□□ -0.37
CROCCP2-207ENST00000640476 NCR3O14931 201 aa12.72□□□□□ -0.37
CROCCP2-207ENST00000640476 FAT1Q14517 4588 aa12.72□□□□□ -0.37
CROCCP2-207ENST00000640476 XGP55808 180 aa12.71□□□□□ -0.37
CROCCP2-207ENST00000640476 MTURNQ8N3F0 131 aa12.71□□□□□ -0.37
CROCCP2-207ENST00000640476 LINC00474Q9P2X8 69 aa12.71□□□□□ -0.37
CROCCP2-207ENST00000640476 HSPG2P98160 4391 aa12.71□□□□□ -0.37
CROCCP2-207ENST00000640476 SMCPP49901 116 aaPredicted RBP12.71□□□□□ -0.38
CROCCP2-207ENST00000640476 ETDBQ3ZM63 59 aa12.71□□□□□ -0.38
CROCCP2-207ENST00000640476 PHF5AQ7RTV0 110 aaKnown RBP12.71□□□□□ -0.38
CROCCP2-207ENST00000640476 IGKV2-28A0A075B6P5 120 aa12.7□□□□□ -0.38
CROCCP2-207ENST00000640476 M0QXV9 152 aa12.7□□□□□ -0.38
CROCCP2-207ENST00000640476 IGKV2D-28P01615 120 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms