RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 PRUNE2Q8WUY3 3088 aa7.61□□□□□ -1.19
SCN1B-208ENST00000640135 PCSK5Q92824 1860 aa7.6□□□□□ -1.19
SCN1B-208ENST00000640135 SMCR5Q8TEV8 140 aa7.6□□□□□ -1.19
SCN1B-208ENST00000640135 A8MTW9 85 aa7.59□□□□□ -1.19
SCN1B-208ENST00000640135 SERP2Q8N6R1 65 aa7.59□□□□□ -1.19
SCN1B-208ENST00000640135 HELZ2Q9BYK8 2649 aaKnown RBP7.59□□□□□ -1.19
SCN1B-208ENST00000640135 LINC00588Q9Y4M8 146 aa7.59□□□□□ -1.19
SCN1B-208ENST00000640135 DNAH14Q0VDD8 3507 aa7.59□□□□□ -1.19
SCN1B-208ENST00000640135 DNAH10OSP0CZ25 163 aa7.59□□□□□ -1.19
SCN1B-208ENST00000640135 COL27A1Q8IZC6 1860 aaPredicted RBP7.58□□□□□ -1.2
SCN1B-208ENST00000640135 V9GYY9 64 aa7.58□□□□□ -1.2
SCN1B-208ENST00000640135 TRBV7-6A0A0J9YX20 115 aa7.58□□□□□ -1.2
SCN1B-208ENST00000640135 C19orf73Q9NVV2 129 aa7.58□□□□□ -1.2
SCN1B-208ENST00000640135 A0A087WYN8 130 aa7.57□□□□□ -1.2
SCN1B-208ENST00000640135 FAM236DA0A1B0GTK5 79 aa7.57□□□□□ -1.2
SCN1B-208ENST00000640135 FAM236CP0DP71 79 aa7.57□□□□□ -1.2
SCN1B-208ENST00000640135 PRO0461Q9UI25 63 aa7.57□□□□□ -1.2
SCN1B-208ENST00000640135 A0A087WSZ3 146 aa7.57□□□□□ -1.2
SCN1B-208ENST00000640135 SERP1Q9Y6X1 66 aa7.57□□□□□ -1.2
SCN1B-208ENST00000640135 C16orf90A8MZG2 172 aa7.57□□□□□ -1.2
SCN1B-208ENST00000640135 RTL8CO15255 209 aa7.57□□□□□ -1.2
SCN1B-208ENST00000640135 PRLHP81277 87 aa7.57□□□□□ -1.2
SCN1B-208ENST00000640135 Q6ZRP5 223 aa7.57□□□□□ -1.2
SCN1B-208ENST00000640135 C6orf48Q9UBA6 75 aa7.56□□□□□ -1.2
SCN1B-208ENST00000640135 LINC00167Q96N53 147 aa7.56□□□□□ -1.2
SCN1B-208ENST00000640135 A0A1B0GW54 56 aa7.56□□□□□ -1.2
SCN1B-208ENST00000640135 K7EIL1 84 aa7.56□□□□□ -1.2
SCN1B-208ENST00000640135 GVQW2A0A096LPI5 108 aaPredicted RBP7.55□□□□□ -1.2
SCN1B-208ENST00000640135 SZT2Q5T011 3432 aa7.55□□□□□ -1.2
SCN1B-208ENST00000640135 MUC4Q99102 2169 aa7.55□□□□□ -1.2
SCN1B-208ENST00000640135 IGHV6-1A0A0B4J1U7 121 aa7.55□□□□□ -1.2
SCN1B-208ENST00000640135 Q6ZVQ6 151 aa7.55□□□□□ -1.2
SCN1B-208ENST00000640135 LINC00337Q8N6G1 96 aa7.55□□□□□ -1.2
SCN1B-208ENST00000640135 CRYGAP11844 174 aa7.53□□□□□ -1.2
SCN1B-208ENST00000640135 CSNK1G2-AS1Q8NCQ2 148 aa7.53□□□□□ -1.2
SCN1B-208ENST00000640135 XIRP2A4UGR9 3374 aa7.52□□□□□ -1.21
SCN1B-208ENST00000640135 PLA2G1BP04054 148 aaKnown RBP7.52□□□□□ -1.21
SCN1B-208ENST00000640135 LAMA1P25391 3075 aa7.51□□□□□ -1.21
SCN1B-208ENST00000640135 TRAV7A0A075B6U4 112 aa7.51□□□□□ -1.21
SCN1B-208ENST00000640135 KRTAP1-3Q8IUG1 177 aa7.5□□□□□ -1.21
SCN1B-208ENST00000640135 COX7CP15954 63 aa7.5□□□□□ -1.21
SCN1B-208ENST00000640135 KRTAP10-11P60412 298 aa7.5□□□□□ -1.21
SCN1B-208ENST00000640135 RPS28P62857 69 aaKnown RBP7.5□□□□□ -1.21
SCN1B-208ENST00000640135 USP24Q9UPU5 2620 aa7.5□□□□□ -1.21
SCN1B-208ENST00000640135 LINC01547P58512 204 aaPredicted RBP7.49□□□□□ -1.21
SCN1B-208ENST00000640135 TM2D3Q9BRN9 247 aa7.48□□□□□ -1.21
SCN1B-208ENST00000640135 SMCPP49901 116 aaPredicted RBP7.48□□□□□ -1.21
SCN1B-208ENST00000640135 FAM30AQ9NZY2 134 aa7.48□□□□□ -1.21
SCN1B-208ENST00000640135 LINC00208Q96KT6 92 aa7.48□□□□□ -1.21
SCN1B-208ENST00000640135 REV3LO60673 3130 aa7.48□□□□□ -1.21
SCN1B-208ENST00000640135 ELOF1P60002 83 aaKnown RBP7.47□□□□□ -1.21
SCN1B-208ENST00000640135 Q8NBF4 154 aa7.47□□□□□ -1.21
SCN1B-208ENST00000640135 KIAA0087Q14695 138 aa7.47□□□□□ -1.21
SCN1B-208ENST00000640135 MGAM2Q2M2H8 2515 aa7.47□□□□□ -1.21
SCN1B-208ENST00000640135 TRBV7-7A0A0K0K1E9 115 aa7.47□□□□□ -1.21
SCN1B-208ENST00000640135 Q6ZRX8 168 aa7.47□□□□□ -1.21
SCN1B-208ENST00000640135 KRTAP1-1Q07627 177 aa7.46□□□□□ -1.21
SCN1B-208ENST00000640135 BCE1O60756 84 aa7.46□□□□□ -1.22
SCN1B-208ENST00000640135 MOBPQ13875 183 aa7.46□□□□□ -1.22
SCN1B-208ENST00000640135 LINC00612Q8N6U2 182 aa7.45□□□□□ -1.22
SCN1B-208ENST00000640135 Q9UF83 564 aa7.45□□□□□ -1.22
SCN1B-208ENST00000640135 Q8N3U1 123 aa7.45□□□□□ -1.22
SCN1B-208ENST00000640135 LINC00336Q6ZUF6 198 aa7.45□□□□□ -1.22
SCN1B-208ENST00000640135 CXCL6P80162 114 aa7.45□□□□□ -1.22
SCN1B-208ENST00000640135 PHF5AQ7RTV0 110 aaKnown RBP7.45□□□□□ -1.22
SCN1B-208ENST00000640135 VCANP13611 3396 aa7.45□□□□□ -1.22
SCN1B-208ENST00000640135 HCG22E2RYF7 251 aa7.44□□□□□ -1.22
SCN1B-208ENST00000640135 KRTAP10-3P60369 221 aa7.44□□□□□ -1.22
SCN1B-208ENST00000640135 TYMSOSQ8TAI1 123 aa7.44□□□□□ -1.22
SCN1B-208ENST00000640135 BRK1Q8WUW1 75 aa7.44□□□□□ -1.22
SCN1B-208ENST00000640135 SNURFQ9Y675 71 aa7.44□□□□□ -1.22
SCN1B-208ENST00000640135 SPACA4Q8TDM5 124 aa7.43□□□□□ -1.22
SCN1B-208ENST00000640135 EPM2AB3EWF7 344 aa7.43□□□□□ -1.22
SCN1B-208ENST00000640135 WIPF1O43516 503 aa7.43□□□□□ -1.22
SCN1B-208ENST00000640135 TP53AIP1Q9HCN2 124 aa7.43□□□□□ -1.22
SCN1B-208ENST00000640135 PRR34Q9NV39 138 aa7.43□□□□□ -1.22
SCN1B-208ENST00000640135 MAST4O15021 2626 aa7.42□□□□□ -1.22
SCN1B-208ENST00000640135 CFAP46Q8IYW2 2715 aa7.42□□□□□ -1.22
SCN1B-208ENST00000640135 RPL37AP61513 92 aaKnown RBP7.41□□□□□ -1.22
SCN1B-208ENST00000640135 SETXQ7Z333 2677 aaKnown RBP7.4□□□□□ -1.22
SCN1B-208ENST00000640135 GIG44P09565 113 aaPredicted RBP7.4□□□□□ -1.22
SCN1B-208ENST00000640135 H0Y9P7 68 aa7.4□□□□□ -1.23
SCN1B-208ENST00000640135 J3QL48 77 aa7.39□□□□□ -1.23
SCN1B-208ENST00000640135 MPLKIPQ8TAP9 179 aa7.39□□□□□ -1.23
SCN1B-208ENST00000640135 hDV103S1A0JD37 113 aa7.39□□□□□ -1.23
SCN1B-208ENST00000640135 SOSTDC1Q6X4U4 206 aa7.39□□□□□ -1.23
SCN1B-208ENST00000640135 BAHCC1Q9P281 2608 aa7.39□□□□□ -1.23
SCN1B-208ENST00000640135 LINC00846Q9NV44 126 aa7.38□□□□□ -1.23
SCN1B-208ENST00000640135 VPREB1P12018 145 aa7.38□□□□□ -1.23
SCN1B-208ENST00000640135 PRR4Q16378 134 aa7.38□□□□□ -1.23
SCN1B-208ENST00000640135 DEFB116Q30KQ4 102 aa7.37□□□□□ -1.23
SCN1B-208ENST00000640135 SPTBN5Q9NRC6 3674 aaKnown RBP7.37□□□□□ -1.23
SCN1B-208ENST00000640135 LINC00476Q8WZB0 136 aa7.36□□□□□ -1.23
SCN1B-208ENST00000640135 A0A087WTM6 91 aa7.36□□□□□ -1.23
SCN1B-208ENST00000640135 PRO0628Q9UI54 55 aa7.36□□□□□ -1.23
SCN1B-208ENST00000640135 CFAP54Q96N23 3096 aa7.36□□□□□ -1.23
SCN1B-208ENST00000640135 A0A0U1RQV1 116 aa7.36□□□□□ -1.23
SCN1B-208ENST00000640135 VPS13AQ96RL7 3174 aa7.36□□□□□ -1.23
SCN1B-208ENST00000640135 CHTF8P0CG12 524 aa7.36□□□□□ -1.23
SCN1B-208ENST00000640135 C9orf163Q8N9P6 203 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms