RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 GINS3Q9BRX5 216 aa-0.95□□□□□ -2.56
CCDC7-215ENST00000639629 RNASE7Q9H1E1 156 aaKnown RBP-0.95□□□□□ -2.56
CCDC7-215ENST00000639629 SLC35B3Q9H1N7 401 aa-0.95□□□□□ -2.56
CCDC7-215ENST00000639629 TPT1P8Q9HAU6 139 aa-0.95□□□□□ -2.56
CCDC7-215ENST00000639629 BZW2Q9Y6E2 419 aaKnown RBP-0.95□□□□□ -2.56
CCDC7-215ENST00000639629 CFAP74Q9C0B2 1584 aa-0.95□□□□□ -2.56
CCDC7-215ENST00000639629 CALB1P05937 261 aa-0.95□□□□□ -2.56
CCDC7-215ENST00000639629 SRP9P49458 86 aaKnown RBP-0.95□□□□□ -2.56
CCDC7-215ENST00000639629 SPCS3P61009 180 aa-0.95□□□□□ -2.56
CCDC7-215ENST00000639629 OR51D1Q8NGF3 324 aa-0.95□□□□□ -2.56
CCDC7-215ENST00000639629 OR2J1Q9GZK6 312 aa-0.95□□□□□ -2.56
CCDC7-215ENST00000639629 OGNP20774 298 aaKnown RBP-0.95□□□□□ -2.56
CCDC7-215ENST00000639629 RRAS2P62070 204 aaPredicted RBP-0.95□□□□□ -2.56
CCDC7-215ENST00000639629 BVES-AS1Q5T3Y7 98 aa-0.95□□□□□ -2.56
CCDC7-215ENST00000639629 CCDC124Q96CT7 223 aaKnown RBP-0.95□□□□□ -2.56
CCDC7-215ENST00000639629 LENEPQ9Y5L5 61 aa-0.95□□□□□ -2.56
CCDC7-215ENST00000639629 ROCK2O75116 1388 aaKnown RBP-0.95□□□□□ -2.56
CCDC7-215ENST00000639629 TRBV27A0A0K0K1C4 114 aa-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 C3orf79P0CE67 100 aa-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 STAG3L2P0CL84 134 aa-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 UBA52P62987 128 aaKnown RBP-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 TTC9CQ8N5M4 171 aa-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 SPTSSBQ8NFR3 76 aa-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 FAM167A-AS1Q96KT0 104 aa-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 RTL8AQ9BWD3 113 aa-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 RPRMQ9NS64 109 aa-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 LINC00312Q9Y6C7 94 aa-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 LINC01558Q9Y6Z2 57 aa-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 EIF3AQ14152 1382 aaKnown RBP-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 PDE6DO43924 150 aa-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 HBDP02042 147 aa-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 SCGB2B2Q4G0G5 96 aa-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 V9GYH0 126 aa-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 DUOX1Q9NRD9 1551 aa-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 DDX60Q8IY21 1712 aaKnown RBP-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 ATP6V0E2Q8NHE4 81 aa-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 NMNAT1Q9HAN9 279 aaPredicted RBP-0.96□□□□□ -2.56
CCDC7-215ENST00000639629 CHP2O43745 196 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 S100A6P06703 90 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 HSD11B1P28845 292 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 RPL7L1Q6DKI1 246 aaKnown RBP-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 NUP35Q8NFH5 326 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 APOEP02649 317 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 RPS12P25398 132 aaKnown RBP-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 LCN1P31025 176 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 TCL1AP56279 114 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 PCBD1P61457 104 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 SFTA2Q6UW10 78 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 TTTY10Q9BZA0 68 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 IGLC7A0M8Q6 106 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 BANF1O75531 89 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 CSN2P05814 226 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 SKP1P63208 163 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 SEC11AP67812 179 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 CCL8P80075 99 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 RTL8BQ17RB0 113 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 PRAP1Q96NZ9 151 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 PRO1933Q9H354 126 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 NOP16Q9Y3C1 178 aaKnown RBP-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 AKAP12Q02952 1782 aa-0.97□□□□□ -2.56
CCDC7-215ENST00000639629 FAM107AO95990 144 aa-0.97□□□□□ -2.57
CCDC7-215ENST00000639629 APOA2P02652 100 aa-0.97□□□□□ -2.57
CCDC7-215ENST00000639629 FABP2P12104 132 aa-0.97□□□□□ -2.57
CCDC7-215ENST00000639629 J3QLW9 94 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 UQCRQO14949 82 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 SIX6O95475 246 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 PET100P0DJ07 73 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 CRYGSP22914 178 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 NCALDP61601 193 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 OGFRL1Q5TC84 451 aaPredicted RBP-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 SPANXN1Q5VSR9 72 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 FAM223AQ8IWN6 122 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 DEFB106AQ8N104 65 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 MMGT1Q8N4V1 131 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 OTORQ9NRC9 128 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 TRAV13-1A0A0B4J241 112 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 SPTY2D1-AS1A0A0U1RR47 76 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 UBE2L5PA0A1B0GUS4 154 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 M0QZ92 97 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 NDUFA3O95167 84 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 TNNC2P02585 160 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 TNNC1P63316 161 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 LINC01545Q5VT33 79 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 TMED4Q7Z7H5 227 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 BORCS7-ASMTA0A0B4J1R7 106 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 A0A1B0GU69 56 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 LOC100130705A0A1B0GUX0 176 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 NDUFC2O95298 119 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 SFT2D2O95562 160 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 HIST1H1EP10412 219 aaKnown RBP-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 HIST1H1BP16401 226 aaKnown RBP-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 HIST1H1DP16402 221 aaKnown RBP-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 MAGOHP61326 146 aaKnown RBP-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 LINC00305Q7Z4B0 112 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 MAGOHBQ96A72 148 aaKnown RBP-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 MGST2Q99735 147 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 FGFR1OP2Q9NVK5 253 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 PLEKHJ1Q9NW61 149 aa-0.98□□□□□ -2.57
CCDC7-215ENST00000639629 TGIF2-C20orf24A0A0A6YYL0 155 aa-0.99□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms