RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 IGKV2-24A0A0C4DH68 120 aa8.78□□□□□ -1
SCN8A-215ENST00000638820 NKAPP1Q8N9T2 125 aa8.78□□□□□ -1
SCN8A-215ENST00000638820 NDUFC2-KCTD14E9PQ53 114 aa8.78□□□□□ -1
SCN8A-215ENST00000638820 LINC00337Q8N6G1 96 aa8.78□□□□□ -1
SCN8A-215ENST00000638820 C14orf177Q52M58 125 aa8.77□□□□□ -1.01
SCN8A-215ENST00000638820 CLEC2BQ92478 149 aa8.77□□□□□ -1.01
SCN8A-215ENST00000638820 TRBV20-1A0A075B6N2 111 aa8.77□□□□□ -1.01
SCN8A-215ENST00000638820 TMEM126AQ9H061 195 aa8.76□□□□□ -1.01
SCN8A-215ENST00000638820 C9JAW5 83 aa8.76□□□□□ -1.01
SCN8A-215ENST00000638820 ATXN8Q156A1 80 aa8.76□□□□□ -1.01
SCN8A-215ENST00000638820 TCL1BO95988 128 aa8.76□□□□□ -1.01
SCN8A-215ENST00000638820 DNAL4O96015 105 aa8.76□□□□□ -1.01
SCN8A-215ENST00000638820 SNCGO76070 127 aa8.75□□□□□ -1.01
SCN8A-215ENST00000638820 PRKDCP78527 4128 aaKnown RBP8.74□□□□□ -1.01
SCN8A-215ENST00000638820 WFDC2Q14508 124 aa8.74□□□□□ -1.01
SCN8A-215ENST00000638820 IGKV2-28A0A075B6P5 120 aa8.74□□□□□ -1.01
SCN8A-215ENST00000638820 IGKV2D-28P01615 120 aa8.74□□□□□ -1.01
SCN8A-215ENST00000638820 SMIM11BQ8TCY0 68 aa8.73□□□□□ -1.01
SCN8A-215ENST00000638820 Q6ZRP5 223 aa8.73□□□□□ -1.01
SCN8A-215ENST00000638820 F8WDY8 70 aa8.72□□□□□ -1.01
SCN8A-215ENST00000638820 NDUFC2O95298 119 aa8.71□□□□□ -1.01
SCN8A-215ENST00000638820 PCP4P48539 62 aa8.71□□□□□ -1.01
SCN8A-215ENST00000638820 LOC107984640A0A0U1RRK4 108 aa8.71□□□□□ -1.02
SCN8A-215ENST00000638820 C1orf134Q5TEV5 83 aa8.71□□□□□ -1.02
SCN8A-215ENST00000638820 FAM19A5Q7Z5A7 132 aaPredicted RBP8.71□□□□□ -1.02
SCN8A-215ENST00000638820 ETDBQ3ZM63 59 aa8.7□□□□□ -1.02
SCN8A-215ENST00000638820 LINC01620Q4KN68 170 aa8.7□□□□□ -1.02
SCN8A-215ENST00000638820 C6orf99Q4VX62 202 aa8.7□□□□□ -1.02
SCN8A-215ENST00000638820 SLPIP03973 132 aa8.69□□□□□ -1.02
SCN8A-215ENST00000638820 TRBV10-3A0A0K0K1G6 114 aa8.69□□□□□ -1.02
SCN8A-215ENST00000638820 SLC25A20O43772 301 aa8.69□□□□□ -1.02
SCN8A-215ENST00000638820 F8W1H4 67 aa8.68□□□□□ -1.02
SCN8A-215ENST00000638820 H0YGX0 51 aa8.67□□□□□ -1.02
SCN8A-215ENST00000638820 C3orf84H3BNL1 204 aa8.67□□□□□ -1.02
SCN8A-215ENST00000638820 RPL28P46779 137 aaKnown RBP8.67□□□□□ -1.02
SCN8A-215ENST00000638820 M0R378 163 aa8.67□□□□□ -1.02
SCN8A-215ENST00000638820 LINC00476Q8WZB0 136 aa8.66□□□□□ -1.02
SCN8A-215ENST00000638820 PPDPFQ9H3Y8 114 aa8.66□□□□□ -1.02
SCN8A-215ENST00000638820 RPL37AP8A6NKH3 93 aa8.65□□□□□ -1.02
SCN8A-215ENST00000638820 DIRC1Q969H9 104 aa8.65□□□□□ -1.02
SCN8A-215ENST00000638820 RNF151Q2KHN1 245 aa8.65□□□□□ -1.03
SCN8A-215ENST00000638820 Q8NDZ9 215 aa8.65□□□□□ -1.03
SCN8A-215ENST00000638820 TRAV23DV6A0A075B6W5 121 aa8.64□□□□□ -1.03
SCN8A-215ENST00000638820 A0A1B0GV72 72 aa8.64□□□□□ -1.03
SCN8A-215ENST00000638820 LST1O00453 97 aa8.64□□□□□ -1.03
SCN8A-215ENST00000638820 FUSP35637 526 aaKnown RBP eCLIP8.64□□□□□ -1.03
SCN8A-215ENST00000638820 CBY1Q9Y3M2 126 aa8.64□□□□□ -1.03
SCN8A-215ENST00000638820 C9orf129Q5T035 196 aaKnown RBP8.64□□□□□ -1.03
SCN8A-215ENST00000638820 TRBV10-2A0A0K0K1G8 114 aa8.63□□□□□ -1.03
SCN8A-215ENST00000638820 FAM168BA1KXE4 195 aa8.63□□□□□ -1.03
SCN8A-215ENST00000638820 J3QR89 54 aa8.63□□□□□ -1.03
SCN8A-215ENST00000638820 VPREB1P12018 145 aa8.63□□□□□ -1.03
SCN8A-215ENST00000638820 UBE2BP63146 152 aa8.63□□□□□ -1.03
SCN8A-215ENST00000638820 K7ERU9 68 aa8.62□□□□□ -1.03
SCN8A-215ENST00000638820 CHTF8P0CG12 524 aa8.62□□□□□ -1.03
SCN8A-215ENST00000638820 ANKRD29Q8N6D5 301 aa8.62□□□□□ -1.03
SCN8A-215ENST00000638820 SERTAD4-AS1Q5TG53 156 aa8.62□□□□□ -1.03
SCN8A-215ENST00000638820 A0A096LNI7 61 aa8.61□□□□□ -1.03
SCN8A-215ENST00000638820 A0A087WTM6 91 aa8.61□□□□□ -1.03
SCN8A-215ENST00000638820 ZNF73O43830 326 aaPredicted RBP8.61□□□□□ -1.03
SCN8A-215ENST00000638820 BAALC-AS2P0C853 105 aa8.61□□□□□ -1.03
SCN8A-215ENST00000638820 PKIGQ9Y2B9 76 aa8.61□□□□□ -1.03
SCN8A-215ENST00000638820 A0A087WYN8 130 aa8.6□□□□□ -1.03
SCN8A-215ENST00000638820 M0QXV9 152 aa8.6□□□□□ -1.03
SCN8A-215ENST00000638820 ETDCA0A1B0GVM5 59 aa8.59□□□□□ -1.03
SCN8A-215ENST00000638820 TLX1NBP0CAT3 122 aa8.59□□□□□ -1.03
SCN8A-215ENST00000638820 C7orf33Q8WU49 177 aa8.59□□□□□ -1.03
SCN8A-215ENST00000638820 FAM218AQ96MZ4 157 aa8.59□□□□□ -1.03
SCN8A-215ENST00000638820 C22orf24Q9Y442 160 aa8.59□□□□□ -1.03
SCN8A-215ENST00000638820 CNBPP62633 177 aaKnown RBP8.59□□□□□ -1.03
SCN8A-215ENST00000638820 Q8N814 137 aa8.59□□□□□ -1.03
SCN8A-215ENST00000638820 IGLV5-52A0A0A0MRZ9 124 aa8.59□□□□□ -1.03
SCN8A-215ENST00000638820 COX7BP24311 80 aa8.59□□□□□ -1.03
SCN8A-215ENST00000638820 LRCOL1A6NCL2 159 aa8.58□□□□□ -1.04
SCN8A-215ENST00000638820 C16orf90A8MZG2 172 aa8.58□□□□□ -1.04
SCN8A-215ENST00000638820 TRACP01848 142 aa8.58□□□□□ -1.04
SCN8A-215ENST00000638820 MRPL55Q7Z7F7 128 aaKnown RBP8.58□□□□□ -1.04
SCN8A-215ENST00000638820 C9orf163Q8N9P6 203 aa8.58□□□□□ -1.04
SCN8A-215ENST00000638820 IGLV6-57P01721 117 aa8.57□□□□□ -1.04
SCN8A-215ENST00000638820 OCIAD2Q56VL3 154 aa8.57□□□□□ -1.04
SCN8A-215ENST00000638820 VPS25Q9BRG1 176 aa8.57□□□□□ -1.04
SCN8A-215ENST00000638820 PLECQ15149 4684 aaKnown RBP8.57□□□□□ -1.04
SCN8A-215ENST00000638820 Q6ZR54 194 aa8.57□□□□□ -1.04
SCN8A-215ENST00000638820 ORMDL1Q9P0S3 153 aa8.57□□□□□ -1.04
SCN8A-215ENST00000638820 hADV29S1A0JD25 119 aa8.56□□□□□ -1.04
SCN8A-215ENST00000638820 Q6ZRN7 208 aaPredicted RBP8.56□□□□□ -1.04
SCN8A-215ENST00000638820 LINC00167Q96N53 147 aa8.56□□□□□ -1.04
SCN8A-215ENST00000638820 RTL8CO15255 209 aa8.56□□□□□ -1.04
SCN8A-215ENST00000638820 TEN1Q86WV5 123 aa8.56□□□□□ -1.04
SCN8A-215ENST00000638820 CSMD3Q7Z407 3707 aa8.56□□□□□ -1.04
SCN8A-215ENST00000638820 H3BT86 120 aa8.56□□□□□ -1.04
SCN8A-215ENST00000638820 LINC00474Q9P2X8 69 aa8.55□□□□□ -1.04
SCN8A-215ENST00000638820 TNP2Q05952 138 aa8.55□□□□□ -1.04
SCN8A-215ENST00000638820 LAMTOR3Q9UHA4 124 aa8.55□□□□□ -1.04
SCN8A-215ENST00000638820 SMCPP49901 116 aaPredicted RBP8.54□□□□□ -1.04
SCN8A-215ENST00000638820 PRO0461Q9UI25 63 aa8.54□□□□□ -1.04
SCN8A-215ENST00000638820 Q6ZQY7 126 aa8.53□□□□□ -1.04
SCN8A-215ENST00000638820 DEFB105AQ8NG35 78 aa8.53□□□□□ -1.04
SCN8A-215ENST00000638820 PPDPFLQ8WWR9 84 aa8.53□□□□□ -1.04
SCN8A-215ENST00000638820 STARD9Q9P2P6 4700 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms