RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 DYNC2H1Q8NCM8 4307 aaKnown RBP5.07□□□□□ -1.6
SCARB2-209ENST00000638409 LOC107984156A0A0G2JMH3 177 aa5.07□□□□□ -1.6
SCARB2-209ENST00000638409 DEFB4AO15263 64 aa5.07□□□□□ -1.6
SCARB2-209ENST00000638409 PRM2P04554 102 aa5.07□□□□□ -1.6
SCARB2-209ENST00000638409 ZFP2Q6ZN57 461 aa5.07□□□□□ -1.6
SCARB2-209ENST00000638409 ARL17AQ8IVW1 177 aa5.07□□□□□ -1.6
SCARB2-209ENST00000638409 A6NED7 52 aa5.06□□□□□ -1.6
SCARB2-209ENST00000638409 LINC00612Q8N6U2 182 aa5.06□□□□□ -1.6
SCARB2-209ENST00000638409 GNRH2O43555 120 aa5.06□□□□□ -1.6
SCARB2-209ENST00000638409 S100A4P26447 101 aaKnown RBP5.06□□□□□ -1.6
SCARB2-209ENST00000638409 DPH3P1Q9H4G8 78 aa5.06□□□□□ -1.6
SCARB2-209ENST00000638409 BPY2O14599 106 aa5.05□□□□□ -1.6
SCARB2-209ENST00000638409 IMUPQ9GZP8 106 aa5.05□□□□□ -1.6
SCARB2-209ENST00000638409 C11orf86A6NJI1 115 aa5.05□□□□□ -1.6
SCARB2-209ENST00000638409 HTN1P15515 57 aa5.05□□□□□ -1.6
SCARB2-209ENST00000638409 ASIPP42127 132 aa5.05□□□□□ -1.6
SCARB2-209ENST00000638409 LCA10Q71F78 164 aa5.05□□□□□ -1.6
SCARB2-209ENST00000638409 IGLV4-69A0A075B6H9 119 aa5.04□□□□□ -1.6
SCARB2-209ENST00000638409 TSPEAR-AS2P59090 65 aa5.04□□□□□ -1.6
SCARB2-209ENST00000638409 UBE2D1P51668 147 aa5.04□□□□□ -1.6
SCARB2-209ENST00000638409 RPL39P62891 51 aaKnown RBP5.04□□□□□ -1.6
SCARB2-209ENST00000638409 NUPR2A6NF83 97 aa5.04□□□□□ -1.6
SCARB2-209ENST00000638409 M0R378 163 aa5.04□□□□□ -1.6
SCARB2-209ENST00000638409 NOP10Q9NPE3 64 aaKnown RBP5.04□□□□□ -1.6
SCARB2-209ENST00000638409 TRAV10A0A0B4J240 114 aa5.03□□□□□ -1.6
SCARB2-209ENST00000638409 A8MWP4 228 aa5.03□□□□□ -1.6
SCARB2-209ENST00000638409 A8MWV9 139 aa5.03□□□□□ -1.6
SCARB2-209ENST00000638409 TCL1BO95988 128 aa5.03□□□□□ -1.6
SCARB2-209ENST00000638409 RNASE3P12724 160 aaKnown RBP5.03□□□□□ -1.6
SCARB2-209ENST00000638409 PRR15Q8IV56 129 aa5.03□□□□□ -1.6
SCARB2-209ENST00000638409 CHCHD7Q9BUK0 85 aa5.03□□□□□ -1.6
SCARB2-209ENST00000638409 UBE2L6O14933 153 aa5.03□□□□□ -1.6
SCARB2-209ENST00000638409 Q6ZTC4 211 aa5.03□□□□□ -1.6
SCARB2-209ENST00000638409 BRK1Q8WUW1 75 aa5.03□□□□□ -1.6
SCARB2-209ENST00000638409 A0A0J9YY99 117 aa5.02□□□□□ -1.61
SCARB2-209ENST00000638409 UBE2D3P61077 147 aa5.02□□□□□ -1.61
SCARB2-209ENST00000638409 UBE2D2P62837 147 aa5.02□□□□□ -1.61
SCARB2-209ENST00000638409 STARD9Q9P2P6 4700 aa5.02□□□□□ -1.61
SCARB2-209ENST00000638409 TMEM170BQ5T4T1 132 aa5.02□□□□□ -1.61
SCARB2-209ENST00000638409 KLK5Q9Y337 293 aaPredicted RBP5.02□□□□□ -1.61
SCARB2-209ENST00000638409 IGHV3-64A0A075B6Q5 118 aa5.01□□□□□ -1.61
SCARB2-209ENST00000638409 M0R2P5 195 aa5.01□□□□□ -1.61
SCARB2-209ENST00000638409 LINC00315P59091 139 aa5.01□□□□□ -1.61
SCARB2-209ENST00000638409 C15orf53Q8NAA6 179 aa5.01□□□□□ -1.61
SCARB2-209ENST00000638409 KIF25-AS1Q9Y6Z4 181 aa5.01□□□□□ -1.61
SCARB2-209ENST00000638409 DEFB131BA0A096LNP1 70 aa5.01□□□□□ -1.61
SCARB2-209ENST00000638409 FAM168BA1KXE4 195 aa5.01□□□□□ -1.61
SCARB2-209ENST00000638409 IGIPA6NJ69 53 aa5.01□□□□□ -1.61
SCARB2-209ENST00000638409 H7C2G1 150 aa5.01□□□□□ -1.61
SCARB2-209ENST00000638409 IGHV3-30P01768 117 aa5.01□□□□□ -1.61
SCARB2-209ENST00000638409 IGHV3-30-5P0DP03 117 aa5.01□□□□□ -1.61
SCARB2-209ENST00000638409 Q6ZTI0 123 aa5.01□□□□□ -1.61
SCARB2-209ENST00000638409 TMEM256-PLSCR3K7ERE1 68 aa5□□□□□ -1.61
SCARB2-209ENST00000638409 DEFB130BP0DP73 79 aa5□□□□□ -1.61
SCARB2-209ENST00000638409 DEFB130AP0DP74 79 aa5□□□□□ -1.61
SCARB2-209ENST00000638409 FAM74A4Q5TZK3 123 aa5□□□□□ -1.61
SCARB2-209ENST00000638409 LAMTOR3Q9UHA4 124 aa5□□□□□ -1.61
SCARB2-209ENST00000638409 LYSTQ99698 3801 aa5□□□□□ -1.61
SCARB2-209ENST00000638409 A0A087WYN8 130 aa5□□□□□ -1.61
SCARB2-209ENST00000638409 TRGV1A0A0A0MS02 117 aa5□□□□□ -1.61
SCARB2-209ENST00000638409 AMELXQ99217 191 aa5□□□□□ -1.61
SCARB2-209ENST00000638409 SDHAF1A6NFY7 115 aa4.99□□□□□ -1.61
SCARB2-209ENST00000638409 H3BNG1 76 aa4.99□□□□□ -1.61
SCARB2-209ENST00000638409 POLR2KP53803 58 aaKnown RBP4.99□□□□□ -1.61
SCARB2-209ENST00000638409 C9orf153Q5TBE3 101 aa4.99□□□□□ -1.61
SCARB2-209ENST00000638409 TRGV2A0A075B6R0 118 aa4.99□□□□□ -1.61
SCARB2-209ENST00000638409 IGKV2D-30A0A075B6S6 120 aa4.99□□□□□ -1.61
SCARB2-209ENST00000638409 LEPROTO15243 131 aa4.99□□□□□ -1.61
SCARB2-209ENST00000638409 LGALS3P17931 250 aaKnown RBP4.99□□□□□ -1.61
SCARB2-209ENST00000638409 C10orf126Q8N4M7 172 aa4.99□□□□□ -1.61
SCARB2-209ENST00000638409 APLNQ9ULZ1 77 aa4.99□□□□□ -1.61
SCARB2-209ENST00000638409 TMEM223A0PJW6 202 aa4.98□□□□□ -1.61
SCARB2-209ENST00000638409 PPP1R17O96001 155 aa4.98□□□□□ -1.61
SCARB2-209ENST00000638409 ZNF56Q15929 161 aa4.98□□□□□ -1.61
SCARB2-209ENST00000638409 LINC01554Q52M75 96 aa4.98□□□□□ -1.61
SCARB2-209ENST00000638409 RMI2Q96E14 147 aa4.98□□□□□ -1.61
SCARB2-209ENST00000638409 PRO1854Q9UHT4 67 aa4.98□□□□□ -1.61
SCARB2-209ENST00000638409 PLECQ15149 4684 aaKnown RBP4.98□□□□□ -1.61
SCARB2-209ENST00000638409 K7ERS5 55 aa4.98□□□□□ -1.61
SCARB2-209ENST00000638409 TMEM141Q96I45 108 aa4.98□□□□□ -1.61
SCARB2-209ENST00000638409 LINC00588Q9Y4M8 146 aa4.98□□□□□ -1.61
SCARB2-209ENST00000638409 SLC25A20O43772 301 aa4.97□□□□□ -1.61
SCARB2-209ENST00000638409 C3orf22Q8N5N4 141 aa4.97□□□□□ -1.61
SCARB2-209ENST00000638409 MUSTN1Q8IVN3 82 aa4.97□□□□□ -1.61
SCARB2-209ENST00000638409 TENM2Q9NT68 2774 aa4.97□□□□□ -1.61
SCARB2-209ENST00000638409 IGHV3-33P01772 117 aa4.96□□□□□ -1.62
SCARB2-209ENST00000638409 ALMS1Q8TCU4 4167 aa4.96□□□□□ -1.62
SCARB2-209ENST00000638409 HTN3P15516 51 aa4.96□□□□□ -1.62
SCARB2-209ENST00000638409 ZNF22P17026 224 aaPredicted RBP4.96□□□□□ -1.62
SCARB2-209ENST00000638409 PRO0255Q9UI72 69 aa4.96□□□□□ -1.62
SCARB2-209ENST00000638409 TRBV27A0A0K0K1C4 114 aa4.95□□□□□ -1.62
SCARB2-209ENST00000638409 P0DMU3 169 aa4.95□□□□□ -1.62
SCARB2-209ENST00000638409 FAM231AP0DMU4 169 aa4.95□□□□□ -1.62
SCARB2-209ENST00000638409 FAM231CP0DMU5 169 aa4.95□□□□□ -1.62
SCARB2-209ENST00000638409 DNAH1Q9P2D7 4330 aa4.95□□□□□ -1.62
SCARB2-209ENST00000638409 FAM236AA0A1B0GUQ0 79 aa4.95□□□□□ -1.62
SCARB2-209ENST00000638409 FAM236BA0A1B0GV22 79 aa4.95□□□□□ -1.62
SCARB2-209ENST00000638409 M0QY20 66 aa4.95□□□□□ -1.62
SCARB2-209ENST00000638409 TRGV4A0A0C4DH28 118 aa4.94□□□□□ -1.62
SCARB2-209ENST00000638409 TRBV6-4A0A1B0GX49 114 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms