RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 KIAA0087Q14695 138 aa13.45□□□□□ -0.26
CACNA1A-246ENST00000637736 TYMSOSQ8TAI1 123 aa13.43□□□□□ -0.26
CACNA1A-246ENST00000637736 TSPEAR-AS2P59090 65 aa13.41□□□□□ -0.26
CACNA1A-246ENST00000637736 AVPP01185 164 aa13.4□□□□□ -0.26
CACNA1A-246ENST00000637736 LINC00846Q9NV44 126 aa13.4□□□□□ -0.26
CACNA1A-246ENST00000637736 MDFIQ99750 246 aa13.39□□□□□ -0.27
CACNA1A-246ENST00000637736 SPTBN4Q9H254 2564 aa13.37□□□□□ -0.27
CACNA1A-246ENST00000637736 J3QL48 77 aa13.37□□□□□ -0.27
CACNA1A-246ENST00000637736 COX6B2Q6YFQ2 88 aa13.37□□□□□ -0.27
CACNA1A-246ENST00000637736 FHL3Q13643 280 aa13.37□□□□□ -0.27
CACNA1A-246ENST00000637736 CHTF8P0CG12 524 aa13.36□□□□□ -0.27
CACNA1A-246ENST00000637736 COX8CQ7Z4L0 72 aa13.36□□□□□ -0.27
CACNA1A-246ENST00000637736 Q96NJ1 140 aa13.36□□□□□ -0.27
CACNA1A-246ENST00000637736 Q6ZSN1 163 aa13.34□□□□□ -0.27
CACNA1A-246ENST00000637736 A0A1B0GW54 56 aa13.33□□□□□ -0.27
CACNA1A-246ENST00000637736 C16orf90A8MZG2 172 aa13.33□□□□□ -0.28
CACNA1A-246ENST00000637736 CDSNQ15517 529 aa13.32□□□□□ -0.28
CACNA1A-246ENST00000637736 ZNF462Q96JM2 2506 aa13.32□□□□□ -0.28
CACNA1A-246ENST00000637736 APLNQ9ULZ1 77 aa13.32□□□□□ -0.28
CACNA1A-246ENST00000637736 PRO0628Q9UI54 55 aa13.31□□□□□ -0.28
CACNA1A-246ENST00000637736 TRAV22A0A0B4J277 110 aa13.31□□□□□ -0.28
CACNA1A-246ENST00000637736 CRIPTQ9P021 101 aa13.29□□□□□ -0.28
CACNA1A-246ENST00000637736 SPATA3Q8NHX4 192 aa13.29□□□□□ -0.28
CACNA1A-246ENST00000637736 SRCAPQ6ZRS2 3230 aa13.28□□□□□ -0.28
CACNA1A-246ENST00000637736 LINC00167Q96N53 147 aa13.26□□□□□ -0.29
CACNA1A-246ENST00000637736 KRTAP10-9P60411 292 aa13.26□□□□□ -0.29
CACNA1A-246ENST00000637736 USP9YO00507 2555 aaPredicted RBP13.25□□□□□ -0.29
CACNA1A-246ENST00000637736 PRO3102Q9H379 93 aa13.24□□□□□ -0.29
CACNA1A-246ENST00000637736 PHF5AQ7RTV0 110 aaKnown RBP13.24□□□□□ -0.29
CACNA1A-246ENST00000637736 H3BPC8 53 aa13.22□□□□□ -0.29
CACNA1A-246ENST00000637736 KIF25-AS1Q9Y6Z4 181 aa13.22□□□□□ -0.29
CACNA1A-246ENST00000637736 C4orf26Q17RF5 130 aa13.22□□□□□ -0.29
CACNA1A-246ENST00000637736 Q6ZRP5 223 aa13.22□□□□□ -0.29
CACNA1A-246ENST00000637736 URB1-AS1Q96HZ7 61 aa13.22□□□□□ -0.29
CACNA1A-246ENST00000637736 RTL8CO15255 209 aa13.2□□□□□ -0.3
CACNA1A-246ENST00000637736 Q8NBF4 154 aa13.2□□□□□ -0.3
CACNA1A-246ENST00000637736 RPL37AP61513 92 aaKnown RBP13.19□□□□□ -0.3
CACNA1A-246ENST00000637736 FLG2Q5D862 2391 aaPredicted RBP13.19□□□□□ -0.3
CACNA1A-246ENST00000637736 MTORP42345 2549 aa13.19□□□□□ -0.3
CACNA1A-246ENST00000637736 LINC00476Q8WZB0 136 aa13.19□□□□□ -0.3
CACNA1A-246ENST00000637736 LINC01600Q96MT4 127 aa13.19□□□□□ -0.3
CACNA1A-246ENST00000637736 BPTFQ12830 3046 aa13.18□□□□□ -0.3
CACNA1A-246ENST00000637736 H3BNG1 76 aa13.18□□□□□ -0.3
CACNA1A-246ENST00000637736 LINC00310P59036 64 aa13.17□□□□□ -0.3
CACNA1A-246ENST00000637736 BCE1O60756 84 aa13.17□□□□□ -0.3
CACNA1A-246ENST00000637736 CENPFP49454 3210 aa13.16□□□□□ -0.3
CACNA1A-246ENST00000637736 IGLV5-39A0A0G2JS06 123 aa13.15□□□□□ -0.31
CACNA1A-246ENST00000637736 EPM2AB3EWF7 344 aa13.14□□□□□ -0.31
CACNA1A-246ENST00000637736 C11orf72Q8NBR9 251 aa13.14□□□□□ -0.31
CACNA1A-246ENST00000637736 CHD8Q9HCK8 2581 aa13.14□□□□□ -0.31
CACNA1A-246ENST00000637736 LINC01546A6NGU7 62 aa13.13□□□□□ -0.31
CACNA1A-246ENST00000637736 COL4A2P08572 1712 aa13.12□□□□□ -0.31
CACNA1A-246ENST00000637736 ELOF1P60002 83 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-246ENST00000637736 IGHV3OR16-9A0A0B4J2B5 98 aa13.11□□□□□ -0.31
CACNA1A-246ENST00000637736 USP24Q9UPU5 2620 aa13.11□□□□□ -0.31
CACNA1A-246ENST00000637736 Q6ZRX8 168 aa13.1□□□□□ -0.31
CACNA1A-246ENST00000637736 POLQO75417 2590 aa13.09□□□□□ -0.31
CACNA1A-246ENST00000637736 LINC00315P59091 139 aa13.09□□□□□ -0.31
CACNA1A-246ENST00000637736 FAM19A4Q96LR4 140 aa13.09□□□□□ -0.31
CACNA1A-246ENST00000637736 A0A096LNJ9 63 aa13.08□□□□□ -0.32
CACNA1A-246ENST00000637736 C9orf129Q5T035 196 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-246ENST00000637736 LOC110117498A0A087WWA1 95 aa13.07□□□□□ -0.32
CACNA1A-246ENST00000637736 UQCR11O14957 56 aa13.06□□□□□ -0.32
CACNA1A-246ENST00000637736 CR1P17927 2039 aa13.06□□□□□ -0.32
CACNA1A-246ENST00000637736 LOC101927531A0A1B0GV80 90 aa13.05□□□□□ -0.32
CACNA1A-246ENST00000637736 IGLV6-57P01721 117 aa13.03□□□□□ -0.32
CACNA1A-246ENST00000637736 LINC01554Q52M75 96 aa13.03□□□□□ -0.32
CACNA1A-246ENST00000637736 CDIP1Q9H305 208 aa13.03□□□□□ -0.32
CACNA1A-246ENST00000637736 Q6ZQT0 140 aa13.03□□□□□ -0.32
CACNA1A-246ENST00000637736 EP400Q96L91 3159 aa13.02□□□□□ -0.32
CACNA1A-246ENST00000637736 TM2D3Q9BRN9 247 aa13.02□□□□□ -0.32
CACNA1A-246ENST00000637736 ST20-AS1Q8NBB2 130 aa13.02□□□□□ -0.33
CACNA1A-246ENST00000637736 PRRC2CQ9Y520 2896 aaKnown RBP13.01□□□□□ -0.33
CACNA1A-246ENST00000637736 NBDYA0A0U1RRE5 68 aa13.01□□□□□ -0.33
CACNA1A-246ENST00000637736 IGLV5-45A0A087WSX0 123 aa13□□□□□ -0.33
CACNA1A-246ENST00000637736 RPS28P62857 69 aaKnown RBP13□□□□□ -0.33
CACNA1A-246ENST00000637736 FASNP49327 2511 aaKnown RBP13□□□□□ -0.33
CACNA1A-246ENST00000637736 C9orf92A6NGG3 77 aa13□□□□□ -0.33
CACNA1A-246ENST00000637736 COA5Q86WW8 74 aa12.99□□□□□ -0.33
CACNA1A-246ENST00000637736 A0A1W2PPR1 153 aa12.99□□□□□ -0.33
CACNA1A-246ENST00000637736 MIR22HGQ0VDD5 57 aa12.99□□□□□ -0.33
CACNA1A-246ENST00000637736 LUZP6Q538Z0 58 aa12.98□□□□□ -0.33
CACNA1A-246ENST00000637736 A8MWP4 228 aa12.97□□□□□ -0.33
CACNA1A-246ENST00000637736 GVQW2A0A096LPI5 108 aaPredicted RBP12.97□□□□□ -0.33
CACNA1A-246ENST00000637736 TRBV7-4A0A0J9YYF1 115 aa12.97□□□□□ -0.33
CACNA1A-246ENST00000637736 MRPL34Q9BQ48 92 aaKnown RBP12.97□□□□□ -0.33
CACNA1A-246ENST00000637736 RBM12B-AS1Q9P1G2 102 aa12.94□□□□□ -0.34
CACNA1A-246ENST00000637736 FAM218AQ96MZ4 157 aa12.93□□□□□ -0.34
CACNA1A-246ENST00000637736 K7EQZ3 153 aa12.93□□□□□ -0.34
CACNA1A-246ENST00000637736 OBSCN-AS1Q96MR7 158 aa12.92□□□□□ -0.34
CACNA1A-246ENST00000637736 IGLV5-37A0A075B6J1 123 aa12.92□□□□□ -0.34
CACNA1A-246ENST00000637736 DSCR10P59022 87 aa12.91□□□□□ -0.34
CACNA1A-246ENST00000637736 A0A0D9SG42 100 aa12.9□□□□□ -0.34
CACNA1A-246ENST00000637736 LINC00304Q8N9R0 145 aa12.89□□□□□ -0.35
CACNA1A-246ENST00000637736 FAM168BA1KXE4 195 aa12.88□□□□□ -0.35
CACNA1A-246ENST00000637736 CYP4F30PQ9H0H9 118 aa12.88□□□□□ -0.35
CACNA1A-246ENST00000637736 DNAH10OSP0CZ25 163 aa12.88□□□□□ -0.35
CACNA1A-246ENST00000637736 LINC00588Q9Y4M8 146 aa12.88□□□□□ -0.35
CACNA1A-246ENST00000637736 CEP295Q9C0D2 2601 aa12.88□□□□□ -0.35
CACNA1A-246ENST00000637736 A8MUN3 132 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms