RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 LINC00482Q8N8I6 264 aa13.73□□□□□ -0.21
CACNA1A-243ENST00000637616 HIVEP2P31629 2446 aa13.73□□□□□ -0.21
CACNA1A-243ENST00000637616 COX17Q14061 63 aa13.72□□□□□ -0.21
CACNA1A-243ENST00000637616 X6R8D5 127 aa13.72□□□□□ -0.21
CACNA1A-243ENST00000637616 Q6ZQY7 126 aa13.72□□□□□ -0.21
CACNA1A-243ENST00000637616 TRAV10A0A0B4J240 114 aa13.71□□□□□ -0.21
CACNA1A-243ENST00000637616 LINC01547P58512 204 aaPredicted RBP13.7□□□□□ -0.22
CACNA1A-243ENST00000637616 SCXQ7RTU7 201 aa13.7□□□□□ -0.22
CACNA1A-243ENST00000637616 LINC00612Q8N6U2 182 aa13.69□□□□□ -0.22
CACNA1A-243ENST00000637616 XAGE1AQ9HD64 81 aa13.69□□□□□ -0.22
CACNA1A-243ENST00000637616 Q5XG85 94 aa13.69□□□□□ -0.22
CACNA1A-243ENST00000637616 SNURFQ9Y675 71 aa13.69□□□□□ -0.22
CACNA1A-243ENST00000637616 IGHV4-28A0A0C4DH34 117 aa13.68□□□□□ -0.22
CACNA1A-243ENST00000637616 ZNF561-AS1K7EIQ3 104 aa13.68□□□□□ -0.22
CACNA1A-243ENST00000637616 SPAG11BQ08648 103 aa13.68□□□□□ -0.22
CACNA1A-243ENST00000637616 Q6ZVQ6 151 aa13.68□□□□□ -0.22
CACNA1A-243ENST00000637616 CYSRT1A8MQ03 144 aa13.67□□□□□ -0.22
CACNA1A-243ENST00000637616 HTN3P15516 51 aa13.66□□□□□ -0.22
CACNA1A-243ENST00000637616 DEFB135Q30KP9 77 aa13.66□□□□□ -0.22
CACNA1A-243ENST00000637616 TRBV10-3A0A0K0K1G6 114 aa13.64□□□□□ -0.23
CACNA1A-243ENST00000637616 RMI2Q96E14 147 aa13.62□□□□□ -0.23
CACNA1A-243ENST00000637616 KLK12Q9UKR0 248 aa13.62□□□□□ -0.23
CACNA1A-243ENST00000637616 FAM236DA0A1B0GTK5 79 aa13.62□□□□□ -0.23
CACNA1A-243ENST00000637616 FAM236CP0DP71 79 aa13.62□□□□□ -0.23
CACNA1A-243ENST00000637616 ITPR2Q14571 2701 aa13.62□□□□□ -0.23
CACNA1A-243ENST00000637616 LOC110117498A0A087WWA1 95 aa13.62□□□□□ -0.23
CACNA1A-243ENST00000637616 H7BZZ5 65 aa13.61□□□□□ -0.23
CACNA1A-243ENST00000637616 IGLV6-57P01721 117 aa13.61□□□□□ -0.23
CACNA1A-243ENST00000637616 ANK3Q12955 4377 aaKnown RBP13.61□□□□□ -0.23
CACNA1A-243ENST00000637616 CELA1Q9UNI1 258 aa13.6□□□□□ -0.23
CACNA1A-243ENST00000637616 KRTAP10-3P60369 221 aa13.59□□□□□ -0.23
CACNA1A-243ENST00000637616 TRAV7A0A075B6U4 112 aa13.59□□□□□ -0.23
CACNA1A-243ENST00000637616 C16orf95Q9H693 158 aa13.58□□□□□ -0.23
CACNA1A-243ENST00000637616 MUC7Q8TAX7 377 aa13.58□□□□□ -0.24
CACNA1A-243ENST00000637616 DAD1P61803 113 aa13.58□□□□□ -0.24
CACNA1A-243ENST00000637616 NDUFC2-KCTD14E9PQ53 114 aa13.56□□□□□ -0.24
CACNA1A-243ENST00000637616 TM2D3Q9BRN9 247 aa13.56□□□□□ -0.24
CACNA1A-243ENST00000637616 C6orf48Q9UBA6 75 aa13.55□□□□□ -0.24
CACNA1A-243ENST00000637616 KRTAP1-1Q07627 177 aa13.55□□□□□ -0.24
CACNA1A-243ENST00000637616 TENM4Q6N022 2769 aa13.54□□□□□ -0.24
CACNA1A-243ENST00000637616 Q8N9L7 120 aa13.54□□□□□ -0.24
CACNA1A-243ENST00000637616 DIRC1Q969H9 104 aa13.54□□□□□ -0.24
CACNA1A-243ENST00000637616 A0A0J9YWU9 116 aa13.53□□□□□ -0.24
CACNA1A-243ENST00000637616 IGHV4-30-4P0DP06 118 aa13.53□□□□□ -0.24
CACNA1A-243ENST00000637616 F8WEM9 126 aa13.53□□□□□ -0.24
CACNA1A-243ENST00000637616 HIGD2BQ4VC39 106 aa13.53□□□□□ -0.24
CACNA1A-243ENST00000637616 LYRM9A8MSI8 78 aa13.52□□□□□ -0.24
CACNA1A-243ENST00000637616 ZNF73O43830 326 aaPredicted RBP13.52□□□□□ -0.24
CACNA1A-243ENST00000637616 PDZD2O15018 2839 aa13.52□□□□□ -0.25
CACNA1A-243ENST00000637616 TENM1Q9UKZ4 2725 aa13.5□□□□□ -0.25
CACNA1A-243ENST00000637616 UNC79Q9P2D8 2635 aa13.5□□□□□ -0.25
CACNA1A-243ENST00000637616 COX7BP24311 80 aa13.5□□□□□ -0.25
CACNA1A-243ENST00000637616 SMR3AQ99954 134 aa13.5□□□□□ -0.25
CACNA1A-243ENST00000637616 C9orf66Q5T8R8 295 aa13.49□□□□□ -0.25
CACNA1A-243ENST00000637616 KLKP1Q107X0 134 aa13.48□□□□□ -0.25
CACNA1A-243ENST00000637616 CXCL6P80162 114 aa13.48□□□□□ -0.25
CACNA1A-243ENST00000637616 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.48□□□□□ -0.25
CACNA1A-243ENST00000637616 HELZ2Q9BYK8 2649 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-243ENST00000637616 TRRAPQ9Y4A5 3859 aa13.48□□□□□ -0.25
CACNA1A-243ENST00000637616 TRBV7-4A0A0J9YYF1 115 aa13.47□□□□□ -0.25
CACNA1A-243ENST00000637616 HIVEP1P15822 2718 aa13.47□□□□□ -0.25
CACNA1A-243ENST00000637616 SERP1Q9Y6X1 66 aa13.46□□□□□ -0.25
CACNA1A-243ENST00000637616 LELP1Q5T871 98 aa13.45□□□□□ -0.26
CACNA1A-243ENST00000637616 PKD1L1Q8TDX9 2849 aa13.45□□□□□ -0.26
CACNA1A-243ENST00000637616 PDE6GP18545 87 aa13.45□□□□□ -0.26
CACNA1A-243ENST00000637616 PRR34Q9NV39 138 aa13.44□□□□□ -0.26
CACNA1A-243ENST00000637616 NOTCH2Q04721 2471 aa13.43□□□□□ -0.26
CACNA1A-243ENST00000637616 ELOF1P60002 83 aaKnown RBP13.43□□□□□ -0.26
CACNA1A-243ENST00000637616 CAMK2N2Q96S95 79 aa13.42□□□□□ -0.26
CACNA1A-243ENST00000637616 Q8NAQ8 132 aa13.41□□□□□ -0.26
CACNA1A-243ENST00000637616 LINC00474Q9P2X8 69 aa13.41□□□□□ -0.26
CACNA1A-243ENST00000637616 BCE1O60756 84 aa13.41□□□□□ -0.26
CACNA1A-243ENST00000637616 WIPF1O43516 503 aa13.41□□□□□ -0.26
CACNA1A-243ENST00000637616 NREPQ16612 68 aa13.41□□□□□ -0.26
CACNA1A-243ENST00000637616 VPREB1P12018 145 aa13.4□□□□□ -0.26
CACNA1A-243ENST00000637616 FASNP49327 2511 aaKnown RBP13.4□□□□□ -0.26
CACNA1A-243ENST00000637616 C3orf84H3BNL1 204 aa13.4□□□□□ -0.26
CACNA1A-243ENST00000637616 BPY2O14599 106 aa13.4□□□□□ -0.26
CACNA1A-243ENST00000637616 LINC00336Q6ZUF6 198 aa13.4□□□□□ -0.26
CACNA1A-243ENST00000637616 EPM2AB3EWF7 344 aa13.39□□□□□ -0.27
CACNA1A-243ENST00000637616 DEFB105AQ8NG35 78 aa13.39□□□□□ -0.27
CACNA1A-243ENST00000637616 FP248Q71RG6 208 aaPredicted RBP13.39□□□□□ -0.27
CACNA1A-243ENST00000637616 GVQW2A0A096LPI5 108 aaPredicted RBP13.38□□□□□ -0.27
CACNA1A-243ENST00000637616 Q6ZRU5 148 aa13.38□□□□□ -0.27
CACNA1A-243ENST00000637616 WFDC10BQ8IUB3 73 aa13.38□□□□□ -0.27
CACNA1A-243ENST00000637616 KMT2BQ9UMN6 2715 aaPredicted RBP13.38□□□□□ -0.27
CACNA1A-243ENST00000637616 ATRQ13535 2644 aa13.38□□□□□ -0.27
CACNA1A-243ENST00000637616 MIFP14174 115 aa13.38□□□□□ -0.27
CACNA1A-243ENST00000637616 SPART-AS1P0CW21 52 aa13.37□□□□□ -0.27
CACNA1A-243ENST00000637616 TEP1Q99973 2627 aaKnown RBP13.37□□□□□ -0.27
CACNA1A-243ENST00000637616 APOC4P55056 127 aa13.35□□□□□ -0.27
CACNA1A-243ENST00000637616 TRBV7-6A0A0J9YX20 115 aa13.34□□□□□ -0.27
CACNA1A-243ENST00000637616 TMEM254Q8TBM7 123 aa13.34□□□□□ -0.27
CACNA1A-243ENST00000637616 LINC00528Q8N1L1 170 aa13.33□□□□□ -0.27
CACNA1A-243ENST00000637616 H3BQ85 93 aa13.33□□□□□ -0.28
CACNA1A-243ENST00000637616 M0R378 163 aa13.32□□□□□ -0.28
CACNA1A-243ENST00000637616 IGKV4-1P06312 121 aa13.31□□□□□ -0.28
CACNA1A-243ENST00000637616 Q6ZRP5 223 aa13.3□□□□□ -0.28
CACNA1A-243ENST00000637616 J3QKU1 62 aa13.29□□□□□ -0.28
CACNA1A-243ENST00000637616 SMIM26A0A096LP01 95 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms