RNA–Protein interactions for RNA: ENST00000636705.1

CLN5-214, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-214ENST00000636705 A0A096LNJ9 63 aa2.39□□□□□ -2.03
CLN5-214ENST00000636705 C17orf112F2Z3M2 114 aa2.39□□□□□ -2.03
CLN5-214ENST00000636705 HIST1H2BKO60814 126 aa2.39□□□□□ -2.03
CLN5-214ENST00000636705 HIST1H2BJP06899 126 aa2.39□□□□□ -2.03
CLN5-214ENST00000636705 TRGC1P0CF51 173 aa2.39□□□□□ -2.03
CLN5-214ENST00000636705 RPL28P46779 137 aaKnown RBP2.39□□□□□ -2.03
CLN5-214ENST00000636705 KRTAP7-1Q8IUC3 87 aa2.39□□□□□ -2.03
CLN5-214ENST00000636705 CYB561D1Q8N8Q1 229 aa2.39□□□□□ -2.03
CLN5-214ENST00000636705 TRBV24-1A0A075B6N3 115 aa2.38□□□□□ -2.03
CLN5-214ENST00000636705 G3V3Q6 166 aa2.38□□□□□ -2.03
CLN5-214ENST00000636705 H3BQ15 152 aa2.38□□□□□ -2.03
CLN5-214ENST00000636705 SSSCA1O60232 199 aa2.38□□□□□ -2.03
CLN5-214ENST00000636705 FUSP35637 526 aaKnown RBP eCLIP2.38□□□□□ -2.03
CLN5-214ENST00000636705 GTF2H5Q6ZYL4 71 aa2.38□□□□□ -2.03
CLN5-214ENST00000636705 SMCR5Q8TEV8 140 aa2.38□□□□□ -2.03
CLN5-214ENST00000636705 LYRM1O43325 122 aa2.38□□□□□ -2.03
CLN5-214ENST00000636705 SFTA3P0C7M3 94 aa2.38□□□□□ -2.03
CLN5-214ENST00000636705 MIAQ16674 131 aa2.38□□□□□ -2.03
CLN5-214ENST00000636705 DEFB116Q30KQ4 102 aa2.38□□□□□ -2.03
CLN5-214ENST00000636705 HIGD2BQ4VC39 106 aa2.38□□□□□ -2.03
CLN5-214ENST00000636705 EIF5AL1Q6IS14 154 aaKnown RBP2.38□□□□□ -2.03
CLN5-214ENST00000636705 DPPA3Q6W0C5 159 aa2.38□□□□□ -2.03
CLN5-214ENST00000636705 C7orf65Q6ZTY9 151 aa2.38□□□□□ -2.03
CLN5-214ENST00000636705 TEN1Q86WV5 123 aa2.38□□□□□ -2.03
CLN5-214ENST00000636705 DIRC1Q969H9 104 aa2.38□□□□□ -2.03
CLN5-214ENST00000636705 SCGB3A1Q96QR1 104 aa2.38□□□□□ -2.03
CLN5-214ENST00000636705 TMEM191AQ9H0A3 160 aa2.38□□□□□ -2.03
CLN5-214ENST00000636705 LINC00474Q9P2X8 69 aa2.38□□□□□ -2.03
CLN5-214ENST00000636705 FAT2Q9NYQ8 4349 aa2.37□□□□□ -2.03
CLN5-214ENST00000636705 HSPG2P98160 4391 aa2.37□□□□□ -2.03
CLN5-214ENST00000636705 TRBV10-1A0A0K0K1A3 114 aa2.37□□□□□ -2.03
CLN5-214ENST00000636705 HMSDA8MTL9 139 aa2.37□□□□□ -2.03
CLN5-214ENST00000636705 HAMPP81172 84 aa2.37□□□□□ -2.03
CLN5-214ENST00000636705 LGALSLQ3ZCW2 172 aaPredicted RBP2.37□□□□□ -2.03
CLN5-214ENST00000636705 C9orf163Q8N9P6 203 aa2.37□□□□□ -2.03
CLN5-214ENST00000636705 LINC01600Q96MT4 127 aa2.37□□□□□ -2.03
CLN5-214ENST00000636705 IMMP2LQ96T52 175 aa2.37□□□□□ -2.03
CLN5-214ENST00000636705 MGST2Q99735 147 aa2.37□□□□□ -2.03
CLN5-214ENST00000636705 NMES1Q9C002 83 aa2.37□□□□□ -2.03
CLN5-214ENST00000636705 IGHV3-64A0A075B6Q5 118 aa2.37□□□□□ -2.03
CLN5-214ENST00000636705 IGHV3-73A0A0B4J1V6 119 aa2.37□□□□□ -2.03
CLN5-214ENST00000636705 PANO1I0J062 215 aa2.37□□□□□ -2.03
CLN5-214ENST00000636705 KRTAP10-4P60372 401 aaPredicted RBP2.37□□□□□ -2.03
CLN5-214ENST00000636705 KHDC3LQ587J8 217 aa2.37□□□□□ -2.03
CLN5-214ENST00000636705 SPINK6Q6UWN8 80 aa2.37□□□□□ -2.03
CLN5-214ENST00000636705 C5orf17Q8NAS9 161 aa2.37□□□□□ -2.03
CLN5-214ENST00000636705 SEC11CQ9BY50 192 aa2.37□□□□□ -2.03
CLN5-214ENST00000636705 M0R3E3 92 aa2.36□□□□□ -2.03
CLN5-214ENST00000636705 UQCRQO14949 82 aa2.36□□□□□ -2.03
CLN5-214ENST00000636705 CFAP126Q5VTH2 177 aa2.36□□□□□ -2.03
CLN5-214ENST00000636705 Q5W150 140 aa2.36□□□□□ -2.03
CLN5-214ENST00000636705 MIC13Q5XKP0 118 aa2.36□□□□□ -2.03
CLN5-214ENST00000636705 Q8NDZ9 215 aa2.36□□□□□ -2.03
CLN5-214ENST00000636705 XAGE1AQ9HD64 81 aa2.36□□□□□ -2.03
CLN5-214ENST00000636705 DNAH2Q9P225 4427 aa2.36□□□□□ -2.03
CLN5-214ENST00000636705 IGKV2-40A0A087WW87 121 aaPredicted RBP2.36□□□□□ -2.03
CLN5-214ENST00000636705 TMEM262E9PQX1 116 aa2.36□□□□□ -2.03
CLN5-214ENST00000636705 IGKV2D-40P01614 121 aaPredicted RBP2.36□□□□□ -2.03
CLN5-214ENST00000636705 CRYGAP11844 174 aa2.36□□□□□ -2.03
CLN5-214ENST00000636705 ZNF22P17026 224 aaPredicted RBP2.36□□□□□ -2.03
CLN5-214ENST00000636705 PYDC2Q56P42 97 aa2.36□□□□□ -2.03
CLN5-214ENST00000636705 COL5A1-AS1Q5SY13 56 aa2.36□□□□□ -2.03
CLN5-214ENST00000636705 SPANXA2-OT1Q8N9U9 137 aa2.36□□□□□ -2.03
CLN5-214ENST00000636705 Q8TAT8 98 aa2.36□□□□□ -2.03
CLN5-214ENST00000636705 KLK12Q9UKR0 248 aa2.36□□□□□ -2.03
CLN5-214ENST00000636705 PKD1P98161 4303 aa2.35□□□□□ -2.03
CLN5-214ENST00000636705 NDUFB6O95139 128 aa2.35□□□□□ -2.03
CLN5-214ENST00000636705 CNBPP62633 177 aaKnown RBP2.35□□□□□ -2.03
CLN5-214ENST00000636705 MIEN1Q9BRT3 115 aa2.35□□□□□ -2.03
CLN5-214ENST00000636705 PKHD1P08F94 4074 aa2.35□□□□□ -2.03
CLN5-214ENST00000636705 FLG2Q5D862 2391 aaPredicted RBP2.35□□□□□ -2.03
CLN5-214ENST00000636705 H3BQ85 93 aa2.34□□□□□ -2.03
CLN5-214ENST00000636705 NPYP01303 97 aa2.34□□□□□ -2.03
CLN5-214ENST00000636705 MT1HL1P0DM35 61 aa2.34□□□□□ -2.03
CLN5-214ENST00000636705 PYYP10082 97 aa2.34□□□□□ -2.03
CLN5-214ENST00000636705 KRTAP5-9P26371 169 aa2.34□□□□□ -2.03
CLN5-214ENST00000636705 ASIPP42127 132 aa2.34□□□□□ -2.03
CLN5-214ENST00000636705 UBE2L3P68036 154 aaKnown RBP2.34□□□□□ -2.03
CLN5-214ENST00000636705 CIRBPQ14011 172 aaKnown RBP2.34□□□□□ -2.03
CLN5-214ENST00000636705 SS18Q15532 418 aa2.34□□□□□ -2.03
CLN5-214ENST00000636705 LYZL1Q6UWQ5 148 aa2.34□□□□□ -2.03
CLN5-214ENST00000636705 FAT3Q8TDW7 4589 aa2.34□□□□□ -2.03
CLN5-214ENST00000636705 TRBV7-3A0A075B6L6 115 aa2.34□□□□□ -2.03
CLN5-214ENST00000636705 PHOX2AO14813 284 aa2.34□□□□□ -2.03
CLN5-214ENST00000636705 GNRH2O43555 120 aa2.34□□□□□ -2.03
CLN5-214ENST00000636705 HBDP02042 147 aa2.34□□□□□ -2.03
CLN5-214ENST00000636705 SPINK8P0C7L1 97 aa2.34□□□□□ -2.03
CLN5-214ENST00000636705 XCL1P47992 114 aa2.34□□□□□ -2.03
CLN5-214ENST00000636705 HIST1H4AP62805 103 aaKnown RBP2.34□□□□□ -2.03
CLN5-214ENST00000636705 TSKUQ8WUA8 353 aa2.34□□□□□ -2.03
CLN5-214ENST00000636705 LRP1BQ9NZR2 4599 aa2.34□□□□□ -2.04
CLN5-214ENST00000636705 DNAH5Q8TE73 4624 aa2.34□□□□□ -2.04
CLN5-214ENST00000636705 UBE2L5PA0A1B0GUS4 154 aa2.33□□□□□ -2.04
CLN5-214ENST00000636705 ANGP03950 147 aaKnown RBP2.33□□□□□ -2.04
CLN5-214ENST00000636705 SMDT1Q9H4I9 107 aa2.33□□□□□ -2.04
CLN5-214ENST00000636705 PLAC8Q9NZF1 115 aa2.33□□□□□ -2.04
CLN5-214ENST00000636705 PSORS1C2Q9UIG4 136 aa2.33□□□□□ -2.04
CLN5-214ENST00000636705 TRBV6-8A0A0A6YYG3 113 aa2.33□□□□□ -2.04
CLN5-214ENST00000636705 GAS8-AS1O95177 125 aa2.33□□□□□ -2.04
CLN5-214ENST00000636705 PRB4P10163 310 aaPredicted RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms