RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 TP73-AS1Q9UF72 201 aa0.89□□□□□ -2.27
SYNGAP1-216ENST00000636640 ERG28Q9UKR5 140 aa0.89□□□□□ -2.27
SYNGAP1-216ENST00000636640 PKIGQ9Y2B9 76 aa0.89□□□□□ -2.27
SYNGAP1-216ENST00000636640 CARHSP1Q9Y2V2 147 aaKnown RBP0.89□□□□□ -2.27
SYNGAP1-216ENST00000636640 FSIP2Q5CZC0 6907 aa0.89□□□□□ -2.27
SYNGAP1-216ENST00000636640 IGKV2D-26A0A0A0MRZ7 120 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 IGLV9-49A0A0B4J1Y8 123 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 TRBV10-3A0A0K0K1G6 114 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 TMEM223A0PJW6 202 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 C9orf92A6NGG3 77 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 B5MCH6 92 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 LINC00614P0C842 121 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 SPRR1AP35321 89 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 LINC00158P58513 81 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 NPC2P61916 151 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 MT1HP80294 61 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 ASB16-AS1Q495Z4 193 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 FAM229BQ4G0N7 80 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 LBHQ53QV2 105 aaPredicted RBP0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 TMEM170BQ5T4T1 132 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 ADAMTSL4-AS1Q5T5F5 129 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 XP32Q5T750 250 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 LCE2DQ5TA82 110 aaPredicted RBP0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 FA2HQ7L5A8 372 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 COMMD7Q86VX2 200 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 BAGE3Q86Y29 109 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 CBLN2Q8IUK8 224 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 Q8N377 158 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 NKAPP1Q8N9T2 125 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 PMCHL2Q9BQD1 86 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 GNB1LQ9BYB4 327 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 TTTY13Q9BZ97 58 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 CDIP1Q9H305 208 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 CRCT1Q9UGL9 99 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 LAMTOR2Q9Y2Q5 125 aa0.88□□□□□ -2.27
SYNGAP1-216ENST00000636640 SSPOA2VEC9 5147 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 TRAV9-1A0A075B6T8 112 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 H0Y8G0 127 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 K7EMI3 77 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 ATP5LO75964 103 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 HBDP02042 147 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 NPSP0C0P6 89 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 LORP23490 312 aaPredicted RBP0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 CXCL5P42830 114 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 KRTAP10-6P60371 365 aaPredicted RBP0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 SEC11AP67812 179 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 MOBPQ13875 183 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 LINC00483Q53H64 154 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 PCOTHQ58A44 107 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 GAGE2AQ6NT46 116 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 HRCT1Q6UXD1 115 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 BOD1L2Q8IYS8 172 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 MIR7-3HGQ8N6C7 128 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 IFI27L1Q96BM0 104 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 SEC11CQ9BY50 192 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 KCNQ1DNQ9H478 68 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 SMCO4Q9NRQ5 59 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 CHTOPQ9Y3Y2 248 aaKnown RBP0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 TRAPPC1Q9Y5R8 145 aa0.87□□□□□ -2.27
SYNGAP1-216ENST00000636640 TRAV12-1A0A0B4J245 112 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 LOC107984156A0A0G2JMH3 177 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 ETDCA0A1B0GVM5 59 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 H3BRM9 83 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 H7C2G1 150 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 PRYO14603 147 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 LEPROTO15243 131 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 SERF1AO75920 110 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 APOC3P02656 99 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 TRGC2P03986 189 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 FABP4P15090 132 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 DDTP30046 118 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 LINC01547P58512 204 aaPredicted RBP0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 RPL24P83731 157 aaKnown RBP0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 COX17Q14061 63 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 MEIG1Q5JSS6 88 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 PAPPA-AS1Q5QFB9 102 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 Q6ZRX8 168 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 SMIM29Q86T20 159 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 ARL17AQ8IVW1 177 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 SLC7A5P1Q8MH63 180 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 LINC00337Q8N6G1 96 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 LITAFQ99732 161 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 NDUFA12Q9UI09 145 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 USH2AO75445 5202 aa0.86□□□□□ -2.27
SYNGAP1-216ENST00000636640 IGLV8-61A0A075B6I0 122 aa0.85□□□□□ -2.27
SYNGAP1-216ENST00000636640 A0A0J9YXY3 114 aa0.85□□□□□ -2.27
SYNGAP1-216ENST00000636640 A0A0U1RQV1 116 aa0.85□□□□□ -2.27
SYNGAP1-216ENST00000636640 COLCA2A8K830 154 aa0.85□□□□□ -2.27
SYNGAP1-216ENST00000636640 J3QQQ9 107 aa0.85□□□□□ -2.27
SYNGAP1-216ENST00000636640 IGLV6-57P01721 117 aa0.85□□□□□ -2.27
SYNGAP1-216ENST00000636640 S100PP25815 95 aa0.85□□□□□ -2.27
SYNGAP1-216ENST00000636640 G0S2P27469 103 aa0.85□□□□□ -2.27
SYNGAP1-216ENST00000636640 RHEBQ15382 184 aa0.85□□□□□ -2.27
SYNGAP1-216ENST00000636640 Q1RN00 199 aa0.85□□□□□ -2.27
SYNGAP1-216ENST00000636640 C1orf195Q5TG92 126 aa0.85□□□□□ -2.27
SYNGAP1-216ENST00000636640 SPAG11AQ6PDA7 123 aa0.85□□□□□ -2.27
SYNGAP1-216ENST00000636640 UQCC3Q6UW78 93 aa0.85□□□□□ -2.27
SYNGAP1-216ENST00000636640 FP248Q71RG6 208 aaPredicted RBP0.85□□□□□ -2.27
SYNGAP1-216ENST00000636640 TRAV23DV6A0A075B6W5 121 aa0.84□□□□□ -2.27
SYNGAP1-216ENST00000636640 TRBV10-2A0A0K0K1G8 114 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms