RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 PKDREJQ9NTG1 2253 aa4.19□□□□□ -1.74
CHD2-221ENST00000635856 A0A0A0MQY5 61 aa4.19□□□□□ -1.74
CHD2-221ENST00000635856 DNAJC9-AS1A6NH13 148 aa4.19□□□□□ -1.74
CHD2-221ENST00000635856 PRR3P79522 188 aaKnown RBP4.19□□□□□ -1.74
CHD2-221ENST00000635856 KIAA0087Q14695 138 aa4.19□□□□□ -1.74
CHD2-221ENST00000635856 FBXL19-AS1Q494R0 122 aa4.18□□□□□ -1.74
CHD2-221ENST00000635856 FAM104AQ969W3 186 aa4.18□□□□□ -1.74
CHD2-221ENST00000635856 ANKHD1Q8IWZ3 2542 aaKnown RBP4.18□□□□□ -1.74
CHD2-221ENST00000635856 TLN1Q9Y490 2541 aaKnown RBP4.18□□□□□ -1.74
CHD2-221ENST00000635856 USMG5Q96IX5 58 aa4.18□□□□□ -1.74
CHD2-221ENST00000635856 NOTCH2Q04721 2471 aa4.18□□□□□ -1.74
CHD2-221ENST00000635856 H3BPC8 53 aa4.18□□□□□ -1.74
CHD2-221ENST00000635856 ASB16-AS1Q495Z4 193 aa4.18□□□□□ -1.74
CHD2-221ENST00000635856 COX17Q14061 63 aa4.17□□□□□ -1.74
CHD2-221ENST00000635856 Q8N9W7 124 aa4.17□□□□□ -1.74
CHD2-221ENST00000635856 TRGV1A0A0A0MS02 117 aa4.17□□□□□ -1.74
CHD2-221ENST00000635856 COA5Q86WW8 74 aa4.17□□□□□ -1.74
CHD2-221ENST00000635856 KLK12Q9UKR0 248 aa4.16□□□□□ -1.74
CHD2-221ENST00000635856 MED13LQ71F56 2210 aa4.16□□□□□ -1.74
CHD2-221ENST00000635856 TRGV4A0A0C4DH28 118 aa4.16□□□□□ -1.74
CHD2-221ENST00000635856 IGHV4-38-2P0DP08 117 aa4.16□□□□□ -1.74
CHD2-221ENST00000635856 CENPEQ02224 2701 aa4.16□□□□□ -1.74
CHD2-221ENST00000635856 MUC4Q99102 2169 aa4.16□□□□□ -1.74
CHD2-221ENST00000635856 B4DSR2 109 aa4.16□□□□□ -1.74
CHD2-221ENST00000635856 H0Y9P7 68 aa4.16□□□□□ -1.74
CHD2-221ENST00000635856 AKAP6Q13023 2319 aa4.16□□□□□ -1.74
CHD2-221ENST00000635856 A0A1B0GW54 56 aa4.15□□□□□ -1.74
CHD2-221ENST00000635856 CREBBPQ92793 2442 aa4.15□□□□□ -1.74
CHD2-221ENST00000635856 PLA2G1BP04054 148 aaKnown RBP4.15□□□□□ -1.75
CHD2-221ENST00000635856 Q8IZM0 81 aa4.15□□□□□ -1.75
CHD2-221ENST00000635856 SETXQ7Z333 2677 aaKnown RBP4.15□□□□□ -1.75
CHD2-221ENST00000635856 IGHV6-1A0A0B4J1U7 121 aa4.14□□□□□ -1.75
CHD2-221ENST00000635856 WFDC13Q8IUB5 93 aa4.14□□□□□ -1.75
CHD2-221ENST00000635856 LINC00476Q8WZB0 136 aa4.14□□□□□ -1.75
CHD2-221ENST00000635856 A8MTW9 85 aa4.14□□□□□ -1.75
CHD2-221ENST00000635856 IGHV4-31P0DP07 118 aa4.14□□□□□ -1.75
CHD2-221ENST00000635856 DEFB105AQ8NG35 78 aa4.14□□□□□ -1.75
CHD2-221ENST00000635856 ZCCHC13Q8WW36 166 aaKnown RBP4.14□□□□□ -1.75
CHD2-221ENST00000635856 WFDC10BQ8IUB3 73 aa4.14□□□□□ -1.75
CHD2-221ENST00000635856 LINC01558Q9Y6Z2 57 aa4.14□□□□□ -1.75
CHD2-221ENST00000635856 SPG11Q96JI7 2443 aa4.13□□□□□ -1.75
CHD2-221ENST00000635856 Q6ZSN1 163 aa4.13□□□□□ -1.75
CHD2-221ENST00000635856 ST20-AS1Q8NBB2 130 aa4.13□□□□□ -1.75
CHD2-221ENST00000635856 REG3AQ06141 175 aa4.13□□□□□ -1.75
CHD2-221ENST00000635856 C1orf134Q5TEV5 83 aa4.13□□□□□ -1.75
CHD2-221ENST00000635856 A0A096LNT2 108 aa4.13□□□□□ -1.75
CHD2-221ENST00000635856 ODF3BA8MYP8 253 aa4.13□□□□□ -1.75
CHD2-221ENST00000635856 MAP1AP78559 2803 aaPredicted RBP4.13□□□□□ -1.75
CHD2-221ENST00000635856 NAV2Q8IVL1 2488 aa4.13□□□□□ -1.75
CHD2-221ENST00000635856 LCE6AA0A183 80 aa4.13□□□□□ -1.75
CHD2-221ENST00000635856 COL27A1Q8IZC6 1860 aaPredicted RBP4.12□□□□□ -1.75
CHD2-221ENST00000635856 IGHV3OR16-9A0A0B4J2B5 98 aa4.12□□□□□ -1.75
CHD2-221ENST00000635856 LYNX1G3V0Z9 82 aa4.12□□□□□ -1.75
CHD2-221ENST00000635856 LYNX1P0DP58 116 aa4.12□□□□□ -1.75
CHD2-221ENST00000635856 ZNF702PQ9H963 129 aa4.12□□□□□ -1.75
CHD2-221ENST00000635856 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.12□□□□□ -1.756e-7■■■■□ 22.5
CHD2-221ENST00000635856 PKD1L2Q7Z442 2459 aa4.11□□□□□ -1.75
CHD2-221ENST00000635856 ZNF462Q96JM2 2506 aa4.11□□□□□ -1.75
CHD2-221ENST00000635856 USP24Q9UPU5 2620 aa4.11□□□□□ -1.75
CHD2-221ENST00000635856 C18orf65Q6ZTR6 163 aa4.11□□□□□ -1.75
CHD2-221ENST00000635856 Q8NAQ8 132 aa4.11□□□□□ -1.75
CHD2-221ENST00000635856 KCNQ1DNQ9H478 68 aa4.11□□□□□ -1.75
CHD2-221ENST00000635856 H3BUA1 57 aa4.1□□□□□ -1.75
CHD2-221ENST00000635856 DEFB131AP59861 70 aa4.1□□□□□ -1.75
CHD2-221ENST00000635856 PTPN13Q12923 2485 aa4.1□□□□□ -1.75
CHD2-221ENST00000635856 DEFB113Q30KQ7 82 aa4.1□□□□□ -1.75
CHD2-221ENST00000635856 MSMBP08118 114 aa4.1□□□□□ -1.75
CHD2-221ENST00000635856 SPINK7P58062 85 aa4.1□□□□□ -1.75
CHD2-221ENST00000635856 LINC00959A0A1B0GUT2 108 aa4.1□□□□□ -1.75
CHD2-221ENST00000635856 HELZ2Q9BYK8 2649 aaKnown RBP4.09□□□□□ -1.75
CHD2-221ENST00000635856 HECTD1Q9ULT8 2610 aa4.09□□□□□ -1.75
CHD2-221ENST00000635856 PLA2G2AP14555 144 aa4.09□□□□□ -1.75
CHD2-221ENST00000635856 CSAG1Q6PB30 78 aa4.09□□□□□ -1.75
CHD2-221ENST00000635856 IGHV4-30-2A0A087WSY4 118 aa4.09□□□□□ -1.75
CHD2-221ENST00000635856 KPRPQ5T749 579 aaPredicted RBP4.09□□□□□ -1.75
CHD2-221ENST00000635856 C11orf71Q6IPW1 123 aa4.09□□□□□ -1.75
CHD2-221ENST00000635856 A0A087X002 238 aa4.09□□□□□ -1.76
CHD2-221ENST00000635856 ZFP36P26651 326 aaKnown RBP4.09□□□□□ -1.76
CHD2-221ENST00000635856 BAHCC1Q9P281 2608 aa4.08□□□□□ -1.76
CHD2-221ENST00000635856 A0A0J9YWU9 116 aa4.08□□□□□ -1.76
CHD2-221ENST00000635856 DEFB116Q30KQ4 102 aa4.08□□□□□ -1.76
CHD2-221ENST00000635856 CLPSL2Q6UWE3 100 aa4.08□□□□□ -1.76
CHD2-221ENST00000635856 ADM2Q7Z4H4 148 aa4.08□□□□□ -1.76
CHD2-221ENST00000635856 LINC00612Q8N6U2 182 aa4.08□□□□□ -1.76
CHD2-221ENST00000635856 ITPR1Q14643 2758 aa4.08□□□□□ -1.76
CHD2-221ENST00000635856 MYO9AB2RTY4 2548 aa4.08□□□□□ -1.76
CHD2-221ENST00000635856 K7EQZ3 153 aa4.07□□□□□ -1.76
CHD2-221ENST00000635856 C1orf137Q5JT78 98 aa4.07□□□□□ -1.76
CHD2-221ENST00000635856 LY6EQ16553 131 aa4.07□□□□□ -1.76
CHD2-221ENST00000635856 KLK9Q2XQG4 91 aa4.06□□□□□ -1.76
CHD2-221ENST00000635856 PCOTHQ58A44 107 aa4.06□□□□□ -1.76
CHD2-221ENST00000635856 C5orf56Q8N8D9 126 aa4.06□□□□□ -1.76
CHD2-221ENST00000635856 IGLV6-57P01721 117 aa4.06□□□□□ -1.76
CHD2-221ENST00000635856 ODF3L2Q3SX64 289 aa4.06□□□□□ -1.76
CHD2-221ENST00000635856 HIVEP2P31629 2446 aa4.06□□□□□ -1.76
CHD2-221ENST00000635856 UTP20O75691 2785 aaKnown RBP4.06□□□□□ -1.76
CHD2-221ENST00000635856 GCN1Q92616 2671 aaKnown RBP4.06□□□□□ -1.76
CHD2-221ENST00000635856 CCDC168Q8NDH2 2452 aa4.05□□□□□ -1.76
CHD2-221ENST00000635856 REG3GQ6UW15 175 aa4.05□□□□□ -1.76
CHD2-221ENST00000635856 IGSF10Q6WRI0 2623 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms