RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 VPS13BQ7Z7G8 4022 aa-0.47□□□□□ -2.48
SCARNA4-202ENST00000625402 PLECQ15149 4684 aaKnown RBP-0.47□□□□□ -2.48
SCARNA4-202ENST00000625402 MTORP42345 2549 aa-0.47□□□□□ -2.48
SCARNA4-202ENST00000625402 MGAM2Q2M2H8 2515 aa-0.47□□□□□ -2.48
SCARNA4-202ENST00000625402 C20orf202A1L168 122 aa-0.47□□□□□ -2.48
SCARNA4-202ENST00000625402 DEFB112Q30KQ8 113 aa-0.47□□□□□ -2.48
SCARNA4-202ENST00000625402 CGREF1Q99674 301 aa-0.47□□□□□ -2.48
SCARNA4-202ENST00000625402 CC2D2AQ9P2K1 1620 aa-0.47□□□□□ -2.48
SCARNA4-202ENST00000625402 FAM186AA6NE01 2351 aa-0.47□□□□□ -2.49
SCARNA4-202ENST00000625402 NIPBLQ6KC79 2804 aaeCLIP-0.47□□□□□ -2.49
SCARNA4-202ENST00000625402 PKD1L2Q7Z442 2459 aa-0.47□□□□□ -2.49
SCARNA4-202ENST00000625402 PLEKHH2Q8IVE3 1493 aa-0.48□□□□□ -2.49
SCARNA4-202ENST00000625402 MRC2Q9UBG0 1479 aa-0.48□□□□□ -2.49
SCARNA4-202ENST00000625402 RNF213Q63HN8 5207 aa-0.48□□□□□ -2.49
SCARNA4-202ENST00000625402 PDCD11Q14690 1871 aaKnown RBP-0.48□□□□□ -2.49
SCARNA4-202ENST00000625402 RYR2Q92736 4967 aa-0.48□□□□□ -2.49
SCARNA4-202ENST00000625402 PDE4DIPQ5VU43 2346 aa-0.48□□□□□ -2.49
SCARNA4-202ENST00000625402 DIP2CQ9Y2E4 1556 aa-0.48□□□□□ -2.49
SCARNA4-202ENST00000625402 TOP2BQ02880 1626 aa-0.48□□□□□ -2.49
SCARNA4-202ENST00000625402 LRRK2Q5S007 2527 aa-0.48□□□□□ -2.49
SCARNA4-202ENST00000625402 C7orf77A4D0Y5 90 aa-0.48□□□□□ -2.49
SCARNA4-202ENST00000625402 TNRC18O15417 2968 aaPredicted RBP-0.48□□□□□ -2.49
SCARNA4-202ENST00000625402 KRTDAPP60985 99 aa-0.48□□□□□ -2.49
SCARNA4-202ENST00000625402 APLNQ9ULZ1 77 aa-0.48□□□□□ -2.49
SCARNA4-202ENST00000625402 HTTP42858 3142 aa-0.48□□□□□ -2.49
SCARNA4-202ENST00000625402 CCDC141Q6ZP82 1450 aa-0.48□□□□□ -2.49
SCARNA4-202ENST00000625402 NLRP1Q9C000 1473 aa-0.48□□□□□ -2.49
SCARNA4-202ENST00000625402 SETBP1Q9Y6X0 1596 aa-0.49□□□□□ -2.49
SCARNA4-202ENST00000625402 FMN2Q9NZ56 1722 aa-0.49□□□□□ -2.49
SCARNA4-202ENST00000625402 NBEAQ8NFP9 2946 aa-0.49□□□□□ -2.49
SCARNA4-202ENST00000625402 DNHD1Q96M86 4753 aa-0.49□□□□□ -2.49
SCARNA4-202ENST00000625402 CEP290O15078 2479 aa-0.49□□□□□ -2.49
SCARNA4-202ENST00000625402 CCDC168Q8NDH2 2452 aa-0.49□□□□□ -2.49
SCARNA4-202ENST00000625402 LAMA2P24043 3122 aaKnown RBP-0.49□□□□□ -2.49
SCARNA4-202ENST00000625402 A0A0G2JND7 137 aa-0.49□□□□□ -2.49
SCARNA4-202ENST00000625402 C9orf92A6NGG3 77 aa-0.49□□□□□ -2.49
SCARNA4-202ENST00000625402 CPSF4LA6NMK7 179 aaKnown RBP-0.49□□□□□ -2.49
SCARNA4-202ENST00000625402 ASIPP42127 132 aa-0.49□□□□□ -2.49
SCARNA4-202ENST00000625402 DEFA5Q01523 94 aa-0.49□□□□□ -2.49
SCARNA4-202ENST00000625402 CACFD1Q9UGQ2 172 aa-0.49□□□□□ -2.49
SCARNA4-202ENST00000625402 EIF4G3O43432 1585 aaKnown RBP-0.49□□□□□ -2.49
SCARNA4-202ENST00000625402 KIAA0556O60303 1618 aa-0.49□□□□□ -2.49
SCARNA4-202ENST00000625402 DNAH1Q9P2D7 4330 aa-0.5□□□□□ -2.49
SCARNA4-202ENST00000625402 A0A1B0GU69 56 aa-0.5□□□□□ -2.49
SCARNA4-202ENST00000625402 GNGT2O14610 69 aa-0.5□□□□□ -2.49
SCARNA4-202ENST00000625402 H1FX-AS1Q4G0G2 97 aa-0.5□□□□□ -2.49
SCARNA4-202ENST00000625402 NUP188Q5SRE5 1749 aa-0.5□□□□□ -2.49
SCARNA4-202ENST00000625402 UTP20O75691 2785 aaKnown RBP-0.51□□□□□ -2.49
SCARNA4-202ENST00000625402 TEX15Q9BXT5 2789 aa-0.51□□□□□ -2.49
SCARNA4-202ENST00000625402 DNAH7Q8WXX0 4024 aa-0.51□□□□□ -2.49
SCARNA4-202ENST00000625402 I3L3M4 83 aa-0.51□□□□□ -2.49
SCARNA4-202ENST00000625402 K7EP34 96 aa-0.51□□□□□ -2.49
SCARNA4-202ENST00000625402 ZZEF1O43149 2961 aa-0.51□□□□□ -2.49
SCARNA4-202ENST00000625402 DSPP15924 2871 aaKnown RBP-0.51□□□□□ -2.49
SCARNA4-202ENST00000625402 XRN1Q8IZH2 1706 aaKnown RBP-0.51□□□□□ -2.49
SCARNA4-202ENST00000625402 C14orf144Q96I85 54 aa-0.51□□□□□ -2.49
SCARNA4-202ENST00000625402 MARF1Q9Y4F3 1742 aaKnown RBP-0.51□□□□□ -2.49
SCARNA4-202ENST00000625402 ANK3Q12955 4377 aaKnown RBP-0.51□□□□□ -2.49
SCARNA4-202ENST00000625402 CHD1O14646 1710 aa-0.52□□□□□ -2.49
SCARNA4-202ENST00000625402 NCOA3Q9Y6Q9 1424 aa-0.52□□□□□ -2.49
SCARNA4-202ENST00000625402 H3BNG1 76 aa-0.52□□□□□ -2.49
SCARNA4-202ENST00000625402 CCL22O00626 93 aa-0.52□□□□□ -2.49
SCARNA4-202ENST00000625402 MT-ATP8P03928 68 aa-0.52□□□□□ -2.49
SCARNA4-202ENST00000625402 MT1HP80294 61 aa-0.52□□□□□ -2.49
SCARNA4-202ENST00000625402 C6orf201Q7Z4U5 140 aa-0.52□□□□□ -2.49
SCARNA4-202ENST00000625402 DEFB107AQ8IZN7 70 aa-0.52□□□□□ -2.49
SCARNA4-202ENST00000625402 CMYA5Q8N3K9 4069 aa-0.52□□□□□ -2.49
SCARNA4-202ENST00000625402 ANKRD36A6QL64 1941 aa-0.52□□□□□ -2.49
SCARNA4-202ENST00000625402 WDR87Q6ZQQ6 2873 aa-0.52□□□□□ -2.49
SCARNA4-202ENST00000625402 GCN1Q92616 2671 aaKnown RBP-0.52□□□□□ -2.49
SCARNA4-202ENST00000625402 DMXL1Q9Y485 3027 aa-0.53□□□□□ -2.49
SCARNA4-202ENST00000625402 NBEAL2Q6ZNJ1 2754 aa-0.53□□□□□ -2.49
SCARNA4-202ENST00000625402 DNAH11Q96DT5 4516 aa-0.53□□□□□ -2.49
SCARNA4-202ENST00000625402 TRBV25-1A0A075B6N4 114 aa-0.53□□□□□ -2.49
SCARNA4-202ENST00000625402 TRAV30A0A087WSZ9 112 aa-0.53□□□□□ -2.49
SCARNA4-202ENST00000625402 S100PP25815 95 aa-0.53□□□□□ -2.49
SCARNA4-202ENST00000625402 TRGV9Q99603 122 aa-0.53□□□□□ -2.49
SCARNA4-202ENST00000625402 CDKN2A-AS1Q9UH64 79 aa-0.53□□□□□ -2.49
SCARNA4-202ENST00000625402 PAPPA2Q9BXP8 1791 aa-0.53□□□□□ -2.49
SCARNA4-202ENST00000625402 TRANK1O15050 2925 aa-0.53□□□□□ -2.49
SCARNA4-202ENST00000625402 A0A0G2JMZ2 1700 aa-0.53□□□□□ -2.49
SCARNA4-202ENST00000625402 ABCA3Q99758 1704 aa-0.53□□□□□ -2.49
SCARNA4-202ENST00000625402 ZFYVE16Q7Z3T8 1539 aa-0.54□□□□□ -2.5
SCARNA4-202ENST00000625402 H7BZZ5 65 aa-0.54□□□□□ -2.5
SCARNA4-202ENST00000625402 HIGD1BQ9P298 99 aa-0.54□□□□□ -2.5
SCARNA4-202ENST00000625402 PTPN23Q9H3S7 1636 aa-0.54□□□□□ -2.5
SCARNA4-202ENST00000625402 SLIT1O75093 1534 aa-0.54□□□□□ -2.5
SCARNA4-202ENST00000625402 FAM135AQ9P2D6 1515 aa-0.54□□□□□ -2.5
SCARNA4-202ENST00000625402 TROQ12816 1431 aaPredicted RBP-0.55□□□□□ -2.5
SCARNA4-202ENST00000625402 TOPAZ1Q8N9V7 1692 aa-0.55□□□□□ -2.5
SCARNA4-202ENST00000625402 TMEM218A2RU14 115 aa-0.55□□□□□ -2.5
SCARNA4-202ENST00000625402 NMSQ5H8A3 153 aa-0.55□□□□□ -2.5
SCARNA4-202ENST00000625402 HEPN1Q6WQI6 88 aa-0.55□□□□□ -2.5
SCARNA4-202ENST00000625402 VAMP8Q9BV40 100 aa-0.55□□□□□ -2.5
SCARNA4-202ENST00000625402 KNDC1Q76NI1 1749 aa-0.55□□□□□ -2.5
SCARNA4-202ENST00000625402 CLIP1P30622 1438 aa-0.55□□□□□ -2.5
SCARNA4-202ENST00000625402 ANKRD50Q9ULJ7 1429 aa-0.55□□□□□ -2.5
SCARNA4-202ENST00000625402 ADAMTS12P58397 1594 aa-0.56□□□□□ -2.5
SCARNA4-202ENST00000625402 ATP6V1G2-DDX39BF2Z307 99 aa-0.56□□□□□ -2.5
SCARNA4-202ENST00000625402 H0Y9P7 68 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms