RNA–Protein interactions for RNA: ENST00000622961.3

CR381653.1-201, humanhuman

TSL 3 BASIC

Gene CR381653.1, Length 812 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR381653.1-201ENST00000622961 HIST1H2BLQ99880 126 aa8.94□□□□□ -0.98
CR381653.1-201ENST00000622961 LPAP08519 4548 aa8.94□□□□□ -0.98
CR381653.1-201ENST00000622961 UBE2BP63146 152 aa8.93□□□□□ -0.98
CR381653.1-201ENST00000622961 LINC00469Q8N7U9 141 aa8.93□□□□□ -0.98
CR381653.1-201ENST00000622961 CDKN2A-AS1Q9UH64 79 aa8.93□□□□□ -0.98
CR381653.1-201ENST00000622961 C3orf79P0CE67 100 aa8.92□□□□□ -0.98
CR381653.1-201ENST00000622961 LINC01545Q5VT33 79 aa8.92□□□□□ -0.98
CR381653.1-201ENST00000622961 IGLV1-50A0A075B6I6 118 aa8.91□□□□□ -0.98
CR381653.1-201ENST00000622961 DPM2O94777 84 aa8.91□□□□□ -0.98
CR381653.1-201ENST00000622961 Q8IZM0 81 aa8.91□□□□□ -0.98
CR381653.1-201ENST00000622961 TOMM7Q9P0U1 55 aa8.91□□□□□ -0.98
CR381653.1-201ENST00000622961 C11orf86A6NJI1 115 aa8.9□□□□□ -0.98
CR381653.1-201ENST00000622961 PRSS2P07478 247 aa8.9□□□□□ -0.98
CR381653.1-201ENST00000622961 ZNF22P17026 224 aaPredicted RBP8.9□□□□□ -0.98
CR381653.1-201ENST00000622961 C20orf202A1L168 122 aa8.89□□□□□ -0.99
CR381653.1-201ENST00000622961 IGKCP01834 107 aa8.89□□□□□ -0.99
CR381653.1-201ENST00000622961 CKS1BP61024 79 aa8.89□□□□□ -0.99
CR381653.1-201ENST00000622961 IGLV5-39A0A0G2JS06 123 aa8.88□□□□□ -0.99
CR381653.1-201ENST00000622961 SMIM1B2RUZ4 78 aa8.88□□□□□ -0.99
CR381653.1-201ENST00000622961 H0Y8G0 127 aa8.88□□□□□ -0.99
CR381653.1-201ENST00000622961 KRTDAPP60985 99 aa8.88□□□□□ -0.99
CR381653.1-201ENST00000622961 TMEM170BQ5T4T1 132 aa8.88□□□□□ -0.99
CR381653.1-201ENST00000622961 XAGE1AQ9HD64 81 aa8.88□□□□□ -0.99
CR381653.1-201ENST00000622961 TMEM223A0PJW6 202 aa8.87□□□□□ -0.99
CR381653.1-201ENST00000622961 CXCL5P42830 114 aa8.86□□□□□ -0.99
CR381653.1-201ENST00000622961 C6orf226Q5I0X4 101 aa8.86□□□□□ -0.99
CR381653.1-201ENST00000622961 SFTA2Q6UW10 78 aa8.86□□□□□ -0.99
CR381653.1-201ENST00000622961 KRTAP4-12Q9BQ66 201 aa8.86□□□□□ -0.99
CR381653.1-201ENST00000622961 C22orf24Q9Y442 160 aa8.86□□□□□ -0.99
CR381653.1-201ENST00000622961 ZNF861PO60384 105 aa8.84□□□□□ -0.99
CR381653.1-201ENST00000622961 SPINK8P0C7L1 97 aa8.84□□□□□ -0.99
CR381653.1-201ENST00000622961 RPL13AP40429 203 aaKnown RBP8.84□□□□□ -0.99
CR381653.1-201ENST00000622961 HERVK_113P61574 105 aa8.84□□□□□ -0.99
CR381653.1-201ENST00000622961 COX7B2Q8TF08 81 aa8.84□□□□□ -0.99
CR381653.1-201ENST00000622961 TMA7Q9Y2S6 64 aaKnown RBP8.84□□□□□ -0.99
CR381653.1-201ENST00000622961 TP73-AS1Q9UF72 201 aa8.83□□□□□ -1
CR381653.1-201ENST00000622961 LCE3BQ5TA77 95 aa8.82□□□□□ -1
CR381653.1-201ENST00000622961 MRPL55Q7Z7F7 128 aaKnown RBP8.82□□□□□ -1
CR381653.1-201ENST00000622961 PMCHL2Q9BQD1 86 aa8.82□□□□□ -1
CR381653.1-201ENST00000622961 LEPROTO15243 131 aa8.81□□□□□ -1
CR381653.1-201ENST00000622961 LBHQ53QV2 105 aaPredicted RBP8.81□□□□□ -1
CR381653.1-201ENST00000622961 PLEKHB2Q96CS7 222 aa8.81□□□□□ -1
CR381653.1-201ENST00000622961 E9PLD3 99 aa8.8□□□□□ -1
CR381653.1-201ENST00000622961 A0A087X002 238 aa8.79□□□□□ -1
CR381653.1-201ENST00000622961 NMUP48645 174 aa8.79□□□□□ -1
CR381653.1-201ENST00000622961 BCE1O60756 84 aa8.78□□□□□ -1
CR381653.1-201ENST00000622961 SCGB1D1O95968 90 aa8.78□□□□□ -1
CR381653.1-201ENST00000622961 JOSD1Q15040 202 aaPredicted RBP8.78□□□□□ -1
CR381653.1-201ENST00000622961 IGLV5-37A0A075B6J1 123 aa8.77□□□□□ -1.01
CR381653.1-201ENST00000622961 LINC00587B1AMM8 73 aa8.77□□□□□ -1.01
CR381653.1-201ENST00000622961 J3QQQ9 107 aa8.77□□□□□ -1.01
CR381653.1-201ENST00000622961 HERV-K104P63124 156 aa8.77□□□□□ -1.01
CR381653.1-201ENST00000622961 COX17Q14061 63 aa8.77□□□□□ -1.01
CR381653.1-201ENST00000622961 PRR4Q16378 134 aa8.77□□□□□ -1.01
CR381653.1-201ENST00000622961 ZNF625Q96I27 306 aaPredicted RBP8.77□□□□□ -1.01
CR381653.1-201ENST00000622961 LINC00167Q96N53 147 aa8.77□□□□□ -1.01
CR381653.1-201ENST00000622961 MYMXA0A1B0GTQ4 84 aa8.76□□□□□ -1.01
CR381653.1-201ENST00000622961 RPL37AP8A6NKH3 93 aa8.76□□□□□ -1.01
CR381653.1-201ENST00000622961 RPL28P46779 137 aaKnown RBP8.76□□□□□ -1.01
CR381653.1-201ENST00000622961 KRTAP13-1Q8IUC0 172 aa8.76□□□□□ -1.01
CR381653.1-201ENST00000622961 GAGE10A6NGK3 116 aa8.75□□□□□ -1.01
CR381653.1-201ENST00000622961 HSBP1L1C9JCN9 74 aa8.75□□□□□ -1.01
CR381653.1-201ENST00000622961 NDUFA12Q9UI09 145 aa8.75□□□□□ -1.01
CR381653.1-201ENST00000622961 LGALS3P17931 250 aaKnown RBP8.74□□□□□ -1.01
CR381653.1-201ENST00000622961 KRTAP19-1Q8IUB9 90 aa8.72□□□□□ -1.01
CR381653.1-201ENST00000622961 TSPAN13O95857 204 aa8.71□□□□□ -1.02
CR381653.1-201ENST00000622961 TSPEAR-AS2P59090 65 aa8.71□□□□□ -1.02
CR381653.1-201ENST00000622961 KRTAP13-2Q52LG2 175 aa8.71□□□□□ -1.02
CR381653.1-201ENST00000622961 ATOH7Q8N100 152 aa8.71□□□□□ -1.02
CR381653.1-201ENST00000622961 NKAPP1Q8N9T2 125 aa8.71□□□□□ -1.02
CR381653.1-201ENST00000622961 CRYGAP11844 174 aa8.7□□□□□ -1.02
CR381653.1-201ENST00000622961 TYMSOSQ8TAI1 123 aa8.7□□□□□ -1.02
CR381653.1-201ENST00000622961 ANAPC11Q9NYG5 84 aa8.7□□□□□ -1.02
CR381653.1-201ENST00000622961 ERG28Q9UKR5 140 aa8.7□□□□□ -1.02
CR381653.1-201ENST00000622961 IGKV2D-26A0A0A0MRZ7 120 aa8.69□□□□□ -1.02
CR381653.1-201ENST00000622961 GHRHP01286 108 aa8.69□□□□□ -1.02
CR381653.1-201ENST00000622961 ANKRD39Q53RE8 183 aa8.69□□□□□ -1.02
CR381653.1-201ENST00000622961 PYY3Q5JQD4 70 aa8.69□□□□□ -1.02
CR381653.1-201ENST00000622961 IGKV2-28A0A075B6P5 120 aa8.68□□□□□ -1.02
CR381653.1-201ENST00000622961 IGKV2D-28P01615 120 aa8.68□□□□□ -1.02
CR381653.1-201ENST00000622961 VPREB1P12018 145 aa8.68□□□□□ -1.02
CR381653.1-201ENST00000622961 UBE2AP49459 152 aa8.68□□□□□ -1.02
CR381653.1-201ENST00000622961 Q8NDZ9 215 aa8.68□□□□□ -1.02
CR381653.1-201ENST00000622961 TIMM17BO60830 172 aa8.67□□□□□ -1.02
CR381653.1-201ENST00000622961 PFN2P35080 140 aa8.67□□□□□ -1.02
CR381653.1-201ENST00000622961 PRLHP81277 87 aa8.67□□□□□ -1.02
CR381653.1-201ENST00000622961 SND1-IT1Q9HBX3 110 aa8.67□□□□□ -1.02
CR381653.1-201ENST00000622961 A0A0J9YXY3 114 aa8.66□□□□□ -1.02
CR381653.1-201ENST00000622961 ZNF815PA8K554 130 aa8.66□□□□□ -1.02
CR381653.1-201ENST00000622961 FAM229BQ4G0N7 80 aa8.66□□□□□ -1.02
CR381653.1-201ENST00000622961 VAMP8Q9BV40 100 aa8.66□□□□□ -1.02
CR381653.1-201ENST00000622961 LOC107984156A0A0G2JMH3 177 aa8.65□□□□□ -1.02
CR381653.1-201ENST00000622961 TMEM238C9JI98 176 aa8.65□□□□□ -1.02
CR381653.1-201ENST00000622961 DLEU1O43261 78 aa8.65□□□□□ -1.02
CR381653.1-201ENST00000622961 LINC00158P58513 81 aa8.65□□□□□ -1.02
CR381653.1-201ENST00000622961 MEIG1Q5JSS6 88 aa8.65□□□□□ -1.02
CR381653.1-201ENST00000622961 ARL17AQ8IVW1 177 aa8.65□□□□□ -1.02
CR381653.1-201ENST00000622961 MUC2Q02817 5179 aa8.65□□□□□ -1.03
CR381653.1-201ENST00000622961 KRTAP9-9Q9BYP9 154 aa8.64□□□□□ -1.03
CR381653.1-201ENST00000622961 KRTAP9-4Q9BYQ2 154 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms