RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 CASC2Q6XLA1 102 aa11.12□□□□□ -0.63
GABRB3-215ENST00000622697 C7orf33Q8WU49 177 aa11.12□□□□□ -0.63
GABRB3-215ENST00000622697 LINC00208Q96KT6 92 aa11.12□□□□□ -0.63
GABRB3-215ENST00000622697 A0A087WSZ3 146 aa11.12□□□□□ -0.63
GABRB3-215ENST00000622697 SBSPONQ8IVN8 264 aa11.12□□□□□ -0.63
GABRB3-215ENST00000622697 WDFY4Q6ZS81 3184 aa11.11□□□□□ -0.63
GABRB3-215ENST00000622697 EIF4EBP3O60516 100 aaPredicted RBP11.11□□□□□ -0.63
GABRB3-215ENST00000622697 SVIPQ8NHG7 77 aa11.11□□□□□ -0.63
GABRB3-215ENST00000622697 Q9BRP9 147 aa11.1□□□□□ -0.63
GABRB3-215ENST00000622697 TRIOO75962 3097 aa11.1□□□□□ -0.63
GABRB3-215ENST00000622697 ZNF706Q9Y5V0 76 aaPredicted RBP11.09□□□□□ -0.63
GABRB3-215ENST00000622697 LINC00474Q9P2X8 69 aa11.09□□□□□ -0.63
GABRB3-215ENST00000622697 SPATA3Q8NHX4 192 aa11.08□□□□□ -0.64
GABRB3-215ENST00000622697 C22orf24Q9Y442 160 aa11.08□□□□□ -0.64
GABRB3-215ENST00000622697 FSHBP01225 129 aa11.08□□□□□ -0.64
GABRB3-215ENST00000622697 PRYO14603 147 aa11.07□□□□□ -0.64
GABRB3-215ENST00000622697 KIAA0087Q14695 138 aa11.07□□□□□ -0.64
GABRB3-215ENST00000622697 MGAQ8IWI9 3026 aa11.06□□□□□ -0.64
GABRB3-215ENST00000622697 SMIM26A0A096LP01 95 aa11.06□□□□□ -0.64
GABRB3-215ENST00000622697 SERP1Q9Y6X1 66 aa11.06□□□□□ -0.64
GABRB3-215ENST00000622697 SEC61GP60059 68 aa11.05□□□□□ -0.64
GABRB3-215ENST00000622697 DNAH14Q0VDD8 3507 aa11.05□□□□□ -0.64
GABRB3-215ENST00000622697 LINC01556Q5JQF7 62 aa11.04□□□□□ -0.64
GABRB3-215ENST00000622697 CIRBP-AS1Q8TBR5 109 aa11.04□□□□□ -0.64
GABRB3-215ENST00000622697 IGHV6-1A0A0B4J1U7 121 aa11.04□□□□□ -0.64
GABRB3-215ENST00000622697 TMEM254Q8TBM7 123 aa11.04□□□□□ -0.64
GABRB3-215ENST00000622697 A6NED7 52 aa11.02□□□□□ -0.65
GABRB3-215ENST00000622697 PCOTHQ58A44 107 aa11.01□□□□□ -0.65
GABRB3-215ENST00000622697 LINC00167Q96N53 147 aa11.01□□□□□ -0.65
GABRB3-215ENST00000622697 CELSR3Q9NYQ7 3312 aa11□□□□□ -0.65
GABRB3-215ENST00000622697 NUPR2A6NF83 97 aa11□□□□□ -0.65
GABRB3-215ENST00000622697 SMCR5Q8TEV8 140 aa11□□□□□ -0.65
GABRB3-215ENST00000622697 VPS13AQ96RL7 3174 aa11□□□□□ -0.65
GABRB3-215ENST00000622697 Q8NAQ8 132 aa10.99□□□□□ -0.65
GABRB3-215ENST00000622697 F8WDY8 70 aa10.99□□□□□ -0.65
GABRB3-215ENST00000622697 RETNLBQ9BQ08 111 aa10.99□□□□□ -0.65
GABRB3-215ENST00000622697 CXCL6P80162 114 aa10.98□□□□□ -0.65
GABRB3-215ENST00000622697 V9GYY9 64 aa10.98□□□□□ -0.65
GABRB3-215ENST00000622697 IGLV5-52A0A0A0MRZ9 124 aa10.97□□□□□ -0.65
GABRB3-215ENST00000622697 SMIM29Q86T20 159 aa10.97□□□□□ -0.65
GABRB3-215ENST00000622697 Q6ZQT0 140 aa10.96□□□□□ -0.65
GABRB3-215ENST00000622697 ELOF1P60002 83 aaKnown RBP10.96□□□□□ -0.66
GABRB3-215ENST00000622697 SZT2Q5T011 3432 aa10.96□□□□□ -0.66
GABRB3-215ENST00000622697 HECTD1Q9ULT8 2610 aa10.96□□□□□ -0.66
GABRB3-215ENST00000622697 PSPHP1O15172 72 aa10.96□□□□□ -0.66
GABRB3-215ENST00000622697 CSNK1G2-AS1Q8NCQ2 148 aa10.96□□□□□ -0.66
GABRB3-215ENST00000622697 HCG22E2RYF7 251 aa10.95□□□□□ -0.66
GABRB3-215ENST00000622697 CENPEQ02224 2701 aa10.95□□□□□ -0.66
GABRB3-215ENST00000622697 VCANP13611 3396 aa10.95□□□□□ -0.66
GABRB3-215ENST00000622697 A0A096LNT2 108 aa10.94□□□□□ -0.66
GABRB3-215ENST00000622697 H0Y9P7 68 aa10.94□□□□□ -0.66
GABRB3-215ENST00000622697 ZNF575Q86XF7 245 aa10.93□□□□□ -0.66
GABRB3-215ENST00000622697 ST20-AS1Q8NBB2 130 aa10.92□□□□□ -0.66
GABRB3-215ENST00000622697 CRYGAP11844 174 aa10.92□□□□□ -0.66
GABRB3-215ENST00000622697 PRR15LQ9BU68 103 aa10.92□□□□□ -0.66
GABRB3-215ENST00000622697 TRBV7-6A0A0J9YX20 115 aa10.92□□□□□ -0.66
GABRB3-215ENST00000622697 GIG44P09565 113 aaPredicted RBP10.92□□□□□ -0.66
GABRB3-215ENST00000622697 KRTAP24-1Q3LI83 254 aa10.91□□□□□ -0.66
GABRB3-215ENST00000622697 FLNBO75369 2602 aaKnown RBP10.9□□□□□ -0.66
GABRB3-215ENST00000622697 F8P00451 2351 aa10.9□□□□□ -0.67
GABRB3-215ENST00000622697 Q6ZRP5 223 aa10.9□□□□□ -0.67
GABRB3-215ENST00000622697 USP24Q9UPU5 2620 aa10.88□□□□□ -0.67
GABRB3-215ENST00000622697 LAMA1P25391 3075 aa10.88□□□□□ -0.67
GABRB3-215ENST00000622697 LINC00588Q9Y4M8 146 aa10.87□□□□□ -0.67
GABRB3-215ENST00000622697 C1orf195Q5TG92 126 aa10.87□□□□□ -0.67
GABRB3-215ENST00000622697 FAM168BA1KXE4 195 aa10.86□□□□□ -0.67
GABRB3-215ENST00000622697 PHF5AQ7RTV0 110 aaKnown RBP10.86□□□□□ -0.67
GABRB3-215ENST00000622697 MDFIQ99750 246 aa10.86□□□□□ -0.67
GABRB3-215ENST00000622697 TM2D3Q9BRN9 247 aa10.86□□□□□ -0.67
GABRB3-215ENST00000622697 H3BNG1 76 aa10.86□□□□□ -0.67
GABRB3-215ENST00000622697 LOC110117498A0A087WWA1 95 aa10.86□□□□□ -0.67
GABRB3-215ENST00000622697 Q6ZRX8 168 aa10.86□□□□□ -0.67
GABRB3-215ENST00000622697 C1orf134Q5TEV5 83 aa10.84□□□□□ -0.67
GABRB3-215ENST00000622697 C19orf73Q9NVV2 129 aa10.84□□□□□ -0.67
GABRB3-215ENST00000622697 IGLV6-57P01721 117 aa10.84□□□□□ -0.67
GABRB3-215ENST00000622697 VPREB1P12018 145 aa10.83□□□□□ -0.68
GABRB3-215ENST00000622697 KRTAP10-3P60369 221 aa10.83□□□□□ -0.68
GABRB3-215ENST00000622697 LINC00476Q8WZB0 136 aa10.83□□□□□ -0.68
GABRB3-215ENST00000622697 C1orf64Q8NEQ6 169 aa10.82□□□□□ -0.68
GABRB3-215ENST00000622697 C4orf26Q17RF5 130 aa10.82□□□□□ -0.68
GABRB3-215ENST00000622697 CHTF8P0CG12 524 aa10.82□□□□□ -0.68
GABRB3-215ENST00000622697 FLNAP21333 2647 aaKnown RBP10.81□□□□□ -0.68
GABRB3-215ENST00000622697 SERTAD4-AS1Q5TG53 156 aa10.81□□□□□ -0.68
GABRB3-215ENST00000622697 RPL37AP61513 92 aaKnown RBP10.8□□□□□ -0.68
GABRB3-215ENST00000622697 Q8NBF4 154 aa10.79□□□□□ -0.68
GABRB3-215ENST00000622697 FREM2Q5SZK8 3169 aa10.79□□□□□ -0.68
GABRB3-215ENST00000622697 GVQW2A0A096LPI5 108 aaPredicted RBP10.79□□□□□ -0.68
GABRB3-215ENST00000622697 C9orf129Q5T035 196 aaKnown RBP10.79□□□□□ -0.68
GABRB3-215ENST00000622697 MOBPQ13875 183 aa10.79□□□□□ -0.68
GABRB3-215ENST00000622697 PMAIP1Q13794 54 aa10.78□□□□□ -0.68
GABRB3-215ENST00000622697 NHLRC4P0CG21 123 aaPredicted RBP10.78□□□□□ -0.68
GABRB3-215ENST00000622697 EPM2AB3EWF7 344 aa10.77□□□□□ -0.69
GABRB3-215ENST00000622697 SPINK1P00995 79 aa10.76□□□□□ -0.69
GABRB3-215ENST00000622697 ITPR3Q14573 2671 aa10.75□□□□□ -0.69
GABRB3-215ENST00000622697 KRTAP10-11P60412 298 aa10.75□□□□□ -0.69
GABRB3-215ENST00000622697 FRYQ5TBA9 3013 aa10.75□□□□□ -0.69
GABRB3-215ENST00000622697 MAP1AP78559 2803 aaPredicted RBP10.75□□□□□ -0.69
GABRB3-215ENST00000622697 hDV103S1A0JD37 113 aa10.74□□□□□ -0.69
GABRB3-215ENST00000622697 MGAM2Q2M2H8 2515 aa10.74□□□□□ -0.69
GABRB3-215ENST00000622697 DSPP15924 2871 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms