RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 IFI27L1Q96BM0 104 aa5.98□□□□□ -1.45
PCDHGC3-207ENST00000622656 RPL13AP40429 203 aaKnown RBP5.97□□□□□ -1.45
PCDHGC3-207ENST00000622656 CHCHD1Q96BP2 118 aaKnown RBP5.97□□□□□ -1.45
PCDHGC3-207ENST00000622656 TRAV12-1A0A0B4J245 112 aa5.96□□□□□ -1.46
PCDHGC3-207ENST00000622656 M0R378 163 aa5.96□□□□□ -1.46
PCDHGC3-207ENST00000622656 TRGC2P03986 189 aa5.96□□□□□ -1.46
PCDHGC3-207ENST00000622656 UBE2AP49459 152 aa5.96□□□□□ -1.46
PCDHGC3-207ENST00000622656 SLC7A5P1Q8MH63 180 aa5.96□□□□□ -1.46
PCDHGC3-207ENST00000622656 TMEM126AQ9H061 195 aa5.96□□□□□ -1.46
PCDHGC3-207ENST00000622656 LINC00158P58513 81 aa5.95□□□□□ -1.46
PCDHGC3-207ENST00000622656 COX17Q14061 63 aa5.95□□□□□ -1.46
PCDHGC3-207ENST00000622656 PRR4Q16378 134 aa5.95□□□□□ -1.46
PCDHGC3-207ENST00000622656 H0Y8G0 127 aa5.94□□□□□ -1.46
PCDHGC3-207ENST00000622656 LCE2BO14633 110 aa5.94□□□□□ -1.46
PCDHGC3-207ENST00000622656 SMIM13P0DJ93 91 aa5.94□□□□□ -1.46
PCDHGC3-207ENST00000622656 CRYGAP11844 174 aa5.94□□□□□ -1.46
PCDHGC3-207ENST00000622656 TSPEAR-AS2P59090 65 aa5.94□□□□□ -1.46
PCDHGC3-207ENST00000622656 FAM19A1Q7Z5A9 133 aa5.94□□□□□ -1.46
PCDHGC3-207ENST00000622656 TYMSOSQ8TAI1 123 aa5.94□□□□□ -1.46
PCDHGC3-207ENST00000622656 KRTAP9-2Q9BYQ4 174 aa5.94□□□□□ -1.46
PCDHGC3-207ENST00000622656 HSBP1O75506 76 aa5.93□□□□□ -1.46
PCDHGC3-207ENST00000622656 SERF1AO75920 110 aa5.93□□□□□ -1.46
PCDHGC3-207ENST00000622656 RPL24P83731 157 aaKnown RBP5.92□□□□□ -1.46
PCDHGC3-207ENST00000622656 PMCHL2Q9BQD1 86 aa5.92□□□□□ -1.46
PCDHGC3-207ENST00000622656 MUC2Q02817 5179 aa5.92□□□□□ -1.46
PCDHGC3-207ENST00000622656 NCR3O14931 201 aa5.91□□□□□ -1.46
PCDHGC3-207ENST00000622656 C3orf22Q8N5N4 141 aa5.91□□□□□ -1.46
PCDHGC3-207ENST00000622656 MIR7-3HGQ8N6C7 128 aa5.91□□□□□ -1.46
PCDHGC3-207ENST00000622656 PLEKHB2Q96CS7 222 aa5.91□□□□□ -1.46
PCDHGC3-207ENST00000622656 COLCA2A8K830 154 aa5.9□□□□□ -1.46
PCDHGC3-207ENST00000622656 FABP4P15090 132 aa5.9□□□□□ -1.46
PCDHGC3-207ENST00000622656 MEIG1Q5JSS6 88 aa5.9□□□□□ -1.46
PCDHGC3-207ENST00000622656 SFTA2Q6UW10 78 aa5.9□□□□□ -1.46
PCDHGC3-207ENST00000622656 RETNLBQ9BQ08 111 aa5.9□□□□□ -1.46
PCDHGC3-207ENST00000622656 NDUFA12Q9UI09 145 aa5.9□□□□□ -1.46
PCDHGC3-207ENST00000622656 LEPROTL1O95214 131 aa5.89□□□□□ -1.47
PCDHGC3-207ENST00000622656 FAM229BQ4G0N7 80 aa5.89□□□□□ -1.47
PCDHGC3-207ENST00000622656 BOD1L2Q8IYS8 172 aa5.89□□□□□ -1.47
PCDHGC3-207ENST00000622656 DAND5Q8N907 189 aa5.89□□□□□ -1.47
PCDHGC3-207ENST00000622656 HIGD2AQ9BW72 106 aa5.89□□□□□ -1.47
PCDHGC3-207ENST00000622656 KRTAP9-6A0A140TA67 174 aa5.88□□□□□ -1.47
PCDHGC3-207ENST00000622656 KRTAP4-16G5E9R7 235 aaPredicted RBP5.87□□□□□ -1.47
PCDHGC3-207ENST00000622656 LEPROTO15243 131 aa5.87□□□□□ -1.47
PCDHGC3-207ENST00000622656 SPRR1AP35321 89 aa5.87□□□□□ -1.47
PCDHGC3-207ENST00000622656 HERV-K104P63124 156 aa5.87□□□□□ -1.47
PCDHGC3-207ENST00000622656 LINC00304Q8N9R0 145 aa5.87□□□□□ -1.47
PCDHGC3-207ENST00000622656 IGKV2D-26A0A0A0MRZ7 120 aa5.86□□□□□ -1.47
PCDHGC3-207ENST00000622656 TRBV10-3A0A0K0K1G6 114 aa5.86□□□□□ -1.47
PCDHGC3-207ENST00000622656 MYMXA0A1B0GTQ4 84 aa5.86□□□□□ -1.47
PCDHGC3-207ENST00000622656 EIF4EBP3O60516 100 aaPredicted RBP5.86□□□□□ -1.47
PCDHGC3-207ENST00000622656 ATP6V1G1O75348 118 aa5.86□□□□□ -1.47
PCDHGC3-207ENST00000622656 SPRR4Q96PI1 79 aa5.86□□□□□ -1.47
PCDHGC3-207ENST00000622656 LOC100996750A0A140TA64 210 aa5.85□□□□□ -1.47
PCDHGC3-207ENST00000622656 J3QQQ9 107 aa5.85□□□□□ -1.47
PCDHGC3-207ENST00000622656 PRYO14603 147 aa5.85□□□□□ -1.47
PCDHGC3-207ENST00000622656 DPM2O94777 84 aa5.85□□□□□ -1.47
PCDHGC3-207ENST00000622656 KRTAP4-6Q9BYQ5 205 aa5.85□□□□□ -1.47
PCDHGC3-207ENST00000622656 KCNQ1DNQ9H478 68 aa5.85□□□□□ -1.47
PCDHGC3-207ENST00000622656 IGKCP01834 107 aa5.84□□□□□ -1.47
PCDHGC3-207ENST00000622656 PLNP26678 52 aa5.84□□□□□ -1.47
PCDHGC3-207ENST00000622656 SOSTDC1Q6X4U4 206 aa5.84□□□□□ -1.47
PCDHGC3-207ENST00000622656 SMCR5Q8TEV8 140 aa5.84□□□□□ -1.47
PCDHGC3-207ENST00000622656 PPDPFQ9H3Y8 114 aa5.84□□□□□ -1.47
PCDHGC3-207ENST00000622656 FAT4Q6V0I7 4981 aa5.84□□□□□ -1.48
PCDHGC3-207ENST00000622656 LOC107984156A0A0G2JMH3 177 aa5.83□□□□□ -1.48
PCDHGC3-207ENST00000622656 ERC2-IT1O76042 136 aa5.83□□□□□ -1.48
PCDHGC3-207ENST00000622656 ARL17AQ8IVW1 177 aa5.83□□□□□ -1.48
PCDHGC3-207ENST00000622656 LINC00337Q8N6G1 96 aa5.83□□□□□ -1.48
PCDHGC3-207ENST00000622656 HSPB8Q9UJY1 196 aa5.83□□□□□ -1.48
PCDHGC3-207ENST00000622656 MUC17Q685J3 4493 aa5.83□□□□□ -1.48
PCDHGC3-207ENST00000622656 NPC2P61916 151 aa5.82□□□□□ -1.48
PCDHGC3-207ENST00000622656 ADAMTSL4-AS1Q5T5F5 129 aa5.82□□□□□ -1.48
PCDHGC3-207ENST00000622656 ETDCA0A1B0GVM5 59 aa5.81□□□□□ -1.48
PCDHGC3-207ENST00000622656 B5MCH6 92 aa5.81□□□□□ -1.48
PCDHGC3-207ENST00000622656 HIST1H2BKO60814 126 aa5.81□□□□□ -1.48
PCDHGC3-207ENST00000622656 HIST1H2BJP06899 126 aa5.81□□□□□ -1.48
PCDHGC3-207ENST00000622656 HIST1H2BOP23527 126 aa5.81□□□□□ -1.48
PCDHGC3-207ENST00000622656 HIST1H2BBP33778 126 aa5.81□□□□□ -1.48
PCDHGC3-207ENST00000622656 HIST1H2BDP58876 126 aa5.81□□□□□ -1.48
PCDHGC3-207ENST00000622656 HIST1H2BCP62807 126 aa5.81□□□□□ -1.48
PCDHGC3-207ENST00000622656 HIST2H2BEQ16778 126 aa5.81□□□□□ -1.48
PCDHGC3-207ENST00000622656 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.81□□□□□ -1.48
PCDHGC3-207ENST00000622656 HIST1H2BHQ93079 126 aa5.81□□□□□ -1.48
PCDHGC3-207ENST00000622656 HIST1H2BNQ99877 126 aa5.81□□□□□ -1.48
PCDHGC3-207ENST00000622656 HIST1H2BMQ99879 126 aa5.81□□□□□ -1.48
PCDHGC3-207ENST00000622656 Q9BRP9 147 aa5.81□□□□□ -1.48
PCDHGC3-207ENST00000622656 MAP1LC3CQ9BXW4 147 aa5.81□□□□□ -1.48
PCDHGC3-207ENST00000622656 A0A0J9YXY3 114 aa5.8□□□□□ -1.48
PCDHGC3-207ENST00000622656 LINC00587B1AMM8 73 aa5.8□□□□□ -1.48
PCDHGC3-207ENST00000622656 LGALS3P17931 250 aaKnown RBP5.8□□□□□ -1.48
PCDHGC3-207ENST00000622656 DDTP30046 118 aa5.8□□□□□ -1.48
PCDHGC3-207ENST00000622656 HERVK_113P61574 105 aa5.8□□□□□ -1.48
PCDHGC3-207ENST00000622656 E9PLD3 99 aa5.79□□□□□ -1.48
PCDHGC3-207ENST00000622656 SYS1-DBNDD2H3BUS1 97 aa5.79□□□□□ -1.48
PCDHGC3-207ENST00000622656 Q8NBF4 154 aa5.79□□□□□ -1.48
PCDHGC3-207ENST00000622656 TTTY13Q9BZ97 58 aa5.79□□□□□ -1.48
PCDHGC3-207ENST00000622656 IGLV7-46A0A075B6I9 117 aa5.78□□□□□ -1.48
PCDHGC3-207ENST00000622656 TRBV10-2A0A0K0K1G8 114 aa5.78□□□□□ -1.48
PCDHGC3-207ENST00000622656 IGLV6-57P01721 117 aa5.78□□□□□ -1.48
PCDHGC3-207ENST00000622656 NMUP48645 174 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms