RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 ABCA1O95477 2261 aa1.59□□□□□ -2.16
BRCA1-229ENST00000621897 ADCY10Q96PN6 1610 aa1.58□□□□□ -2.16
BRCA1-229ENST00000621897 LY75O60449 1722 aa1.58□□□□□ -2.16
BRCA1-229ENST00000621897 NRAPQ86VF7 1730 aa1.58□□□□□ -2.16
BRCA1-229ENST00000621897 ANKRD36CQ5JPF3 1778 aa1.58□□□□□ -2.16
BRCA1-229ENST00000621897 IFI6P09912 130 aa1.58□□□□□ -2.16
BRCA1-229ENST00000621897 ACYP2P14621 99 aa1.58□□□□□ -2.16
BRCA1-229ENST00000621897 KRTAP13-4Q3LI77 160 aa1.58□□□□□ -2.16
BRCA1-229ENST00000621897 CCL19Q99731 98 aa1.58□□□□□ -2.16
BRCA1-229ENST00000621897 FAM103A1Q9BTL3 118 aaKnown RBP1.58□□□□□ -2.16
BRCA1-229ENST00000621897 FXYD6Q9H0Q3 95 aa1.58□□□□□ -2.16
BRCA1-229ENST00000621897 LCE6AA0A183 80 aa1.57□□□□□ -2.16
BRCA1-229ENST00000621897 F5P12259 2224 aa1.56□□□□□ -2.16
BRCA1-229ENST00000621897 CPS1P31327 1500 aa1.56□□□□□ -2.16
BRCA1-229ENST00000621897 TRAV21A0A0B4J279 112 aa1.56□□□□□ -2.16
BRCA1-229ENST00000621897 J3QRE1 110 aa1.56□□□□□ -2.16
BRCA1-229ENST00000621897 NREPQ16612 68 aa1.56□□□□□ -2.16
BRCA1-229ENST00000621897 C10orf113Q5VZT2 155 aa1.56□□□□□ -2.16
BRCA1-229ENST00000621897 UNQ6190/PRO20217Q6UXQ8 127 aa1.56□□□□□ -2.16
BRCA1-229ENST00000621897 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.56□□□□□ -2.16
BRCA1-229ENST00000621897 TJP1Q07157 1748 aa1.56□□□□□ -2.16
BRCA1-229ENST00000621897 KIAA0586Q9BVV6 1533 aa1.56□□□□□ -2.16
BRCA1-229ENST00000621897 IQGAP1P46940 1657 aa1.55□□□□□ -2.16
BRCA1-229ENST00000621897 A0A096LNT2 108 aa1.55□□□□□ -2.16
BRCA1-229ENST00000621897 TRBV30A0A0K0K1B3 111 aa1.55□□□□□ -2.16
BRCA1-229ENST00000621897 LINC01549A6NIU2 74 aa1.55□□□□□ -2.16
BRCA1-229ENST00000621897 OBSCN-AS1Q96MR7 158 aa1.55□□□□□ -2.16
BRCA1-229ENST00000621897 ASCC3Q8N3C0 2202 aaKnown RBP1.55□□□□□ -2.16
BRCA1-229ENST00000621897 ATP7AQ04656 1500 aa1.55□□□□□ -2.16
BRCA1-229ENST00000621897 A0A0G2JMZ2 1700 aa1.54□□□□□ -2.16
BRCA1-229ENST00000621897 QSER1Q2KHR3 1735 aa1.54□□□□□ -2.16
BRCA1-229ENST00000621897 ANKRD17O75179 2603 aaKnown RBP1.54□□□□□ -2.16
BRCA1-229ENST00000621897 TRBV6-1A0A0K0K1D8 114 aa1.54□□□□□ -2.16
BRCA1-229ENST00000621897 SMIM11BQ8TCY0 68 aa1.54□□□□□ -2.16
BRCA1-229ENST00000621897 DOT1LQ8TEK3 1739 aa1.54□□□□□ -2.16
BRCA1-229ENST00000621897 NRXN3Q9Y4C0 1643 aa1.53□□□□□ -2.16
BRCA1-229ENST00000621897 SSC5DA1L4H1 1573 aa1.52□□□□□ -2.17
BRCA1-229ENST00000621897 GVQW2A0A096LPI5 108 aaPredicted RBP1.52□□□□□ -2.17
BRCA1-229ENST00000621897 G3V318 75 aa1.52□□□□□ -2.17
BRCA1-229ENST00000621897 LINC00575Q6W349 94 aa1.52□□□□□ -2.17
BRCA1-229ENST00000621897 Q6ZRX8 168 aa1.52□□□□□ -2.17
BRCA1-229ENST00000621897 WFDC9Q8NEX5 89 aa1.52□□□□□ -2.17
BRCA1-229ENST00000621897 PLAC4Q8WY50 150 aa1.52□□□□□ -2.17
BRCA1-229ENST00000621897 CADP27708 2225 aa1.52□□□□□ -2.17
BRCA1-229ENST00000621897 BAHCC1Q9P281 2608 aa1.52□□□□□ -2.17
BRCA1-229ENST00000621897 SLIT1O75093 1534 aa1.51□□□□□ -2.17
BRCA1-229ENST00000621897 A0A1B0GU69 56 aa1.51□□□□□ -2.17
BRCA1-229ENST00000621897 LINC00959A0A1B0GUT2 108 aa1.51□□□□□ -2.17
BRCA1-229ENST00000621897 NCR3O14931 201 aa1.51□□□□□ -2.17
BRCA1-229ENST00000621897 PIN1P1O15428 100 aa1.51□□□□□ -2.17
BRCA1-229ENST00000621897 SPINK13Q1W4C9 94 aa1.51□□□□□ -2.17
BRCA1-229ENST00000621897 DEFB112Q30KQ8 113 aa1.51□□□□□ -2.17
BRCA1-229ENST00000621897 GAFA1Q96PS6 74 aa1.51□□□□□ -2.17
BRCA1-229ENST00000621897 LRRC37AA6NMS7 1700 aa1.51□□□□□ -2.17
BRCA1-229ENST00000621897 NWD1Q149M9 1564 aa1.51□□□□□ -2.17
BRCA1-229ENST00000621897 SAMD9LQ8IVG5 1584 aa1.51□□□□□ -2.17
BRCA1-229ENST00000621897 PLXNB2O15031 1838 aa1.5□□□□□ -2.17
BRCA1-229ENST00000621897 DDX60LQ5H9U9 1706 aaKnown RBP1.5□□□□□ -2.17
BRCA1-229ENST00000621897 DEFB103AP81534 67 aa1.5□□□□□ -2.17
BRCA1-229ENST00000621897 TULP4Q9NRJ4 1543 aa1.5□□□□□ -2.17
BRCA1-229ENST00000621897 TENM1Q9UKZ4 2725 aa1.49□□□□□ -2.17
BRCA1-229ENST00000621897 J3QKU1 62 aa1.49□□□□□ -2.17
BRCA1-229ENST00000621897 TOMM5Q8N4H5 51 aa1.49□□□□□ -2.17
BRCA1-229ENST00000621897 UBL5Q9BZL1 73 aa1.49□□□□□ -2.17
BRCA1-229ENST00000621897 TRPM2O94759 1503 aa1.49□□□□□ -2.17
BRCA1-229ENST00000621897 RPL37P61927 97 aaKnown RBP1.48□□□□□ -2.17
BRCA1-229ENST00000621897 NCBP2-AS2Q69YL0 99 aa1.48□□□□□ -2.17
BRCA1-229ENST00000621897 ENHOQ6UWT2 76 aa1.48□□□□□ -2.17
BRCA1-229ENST00000621897 NFAT5O94916 1531 aa1.48□□□□□ -2.17
BRCA1-229ENST00000621897 TNCP24821 2201 aa1.48□□□□□ -2.17
BRCA1-229ENST00000621897 FAM208AQ9UK61 1670 aaKnown RBP1.48□□□□□ -2.17
BRCA1-229ENST00000621897 CACNA1BQ00975 2339 aa1.48□□□□□ -2.17
BRCA1-229ENST00000621897 C4AP0C0L4 1744 aa1.47□□□□□ -2.17
BRCA1-229ENST00000621897 C4BP0C0L5 1744 aa1.47□□□□□ -2.17
BRCA1-229ENST00000621897 COX7BP24311 80 aa1.47□□□□□ -2.17
BRCA1-229ENST00000621897 HAMPP81172 84 aa1.47□□□□□ -2.17
BRCA1-229ENST00000621897 AHCTF1Q8WYP5 2266 aa1.47□□□□□ -2.17
BRCA1-229ENST00000621897 ASXL3Q9C0F0 2248 aa1.47□□□□□ -2.17
BRCA1-229ENST00000621897 ZDBF2Q9HCK1 2354 aa1.47□□□□□ -2.17
BRCA1-229ENST00000621897 LY6G6CO95867 125 aa1.46□□□□□ -2.18
BRCA1-229ENST00000621897 DEFB114Q30KQ6 69 aa1.46□□□□□ -2.18
BRCA1-229ENST00000621897 PCOTHQ58A44 107 aa1.46□□□□□ -2.18
BRCA1-229ENST00000621897 KNTC1P50748 2209 aa1.46□□□□□ -2.18
BRCA1-229ENST00000621897 DEPDC5O75140 1603 aa1.45□□□□□ -2.18
BRCA1-229ENST00000621897 NDUFA4O00483 81 aa1.45□□□□□ -2.18
BRCA1-229ENST00000621897 PRH1P02810 166 aa1.45□□□□□ -2.18
BRCA1-229ENST00000621897 NMES1Q9C002 83 aa1.45□□□□□ -2.18
BRCA1-229ENST00000621897 CMC2Q9NRP2 79 aa1.45□□□□□ -2.18
BRCA1-229ENST00000621897 TECTAO75443 2155 aa1.45□□□□□ -2.18
BRCA1-229ENST00000621897 URB1O60287 2271 aaKnown RBP1.45□□□□□ -2.18
BRCA1-229ENST00000621897 PRB1P04280 392 aa1.44□□□□□ -2.18
BRCA1-229ENST00000621897 FCER1GP30273 86 aa1.44□□□□□ -2.18
BRCA1-229ENST00000621897 NAV3Q8IVL0 2385 aa1.44□□□□□ -2.18
BRCA1-229ENST00000621897 RPL38P63173 70 aaKnown RBP1.43□□□□□ -2.18
BRCA1-229ENST00000621897 SSBP3-AS1Q7Z2R9 100 aa1.43□□□□□ -2.18
BRCA1-229ENST00000621897 KCNQ1DNQ9H478 68 aa1.43□□□□□ -2.18
BRCA1-229ENST00000621897 ABRACLQ9P1F3 81 aa1.43□□□□□ -2.18
BRCA1-229ENST00000621897 FLG2Q5D862 2391 aaPredicted RBP1.42□□□□□ -2.18
BRCA1-229ENST00000621897 CPSF4LA6NMK7 179 aaKnown RBP1.42□□□□□ -2.18
BRCA1-229ENST00000621897 KRTAP12-1P59990 96 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms