RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 PRR34Q9NV39 138 aa6.97□□□□□ -1.29
VPS11-208ENST00000621676 F8W1H4 67 aa6.96□□□□□ -1.29
VPS11-208ENST00000621676 Q6ZRP5 223 aa6.96□□□□□ -1.3
VPS11-208ENST00000621676 DEFB105AQ8NG35 78 aa6.96□□□□□ -1.3
VPS11-208ENST00000621676 COX6CP09669 75 aa6.96□□□□□ -1.3
VPS11-208ENST00000621676 HERV-K104P63124 156 aa6.96□□□□□ -1.3
VPS11-208ENST00000621676 SYCNQ0VAF6 134 aa6.96□□□□□ -1.3
VPS11-208ENST00000621676 C6orf99Q4VX62 202 aa6.96□□□□□ -1.3
VPS11-208ENST00000621676 LINC01556Q5JQF7 62 aa6.96□□□□□ -1.3
VPS11-208ENST00000621676 TRAV8-4A0A0B4J246 113 aa6.95□□□□□ -1.3
VPS11-208ENST00000621676 TEX49A0A1B0GTD5 131 aa6.95□□□□□ -1.3
VPS11-208ENST00000621676 C15orf53Q8NAA6 179 aa6.95□□□□□ -1.3
VPS11-208ENST00000621676 NTN5Q8WTR8 489 aaPredicted RBP6.95□□□□□ -1.3
VPS11-208ENST00000621676 A0A087WYN8 130 aa6.94□□□□□ -1.3
VPS11-208ENST00000621676 IBA57-AS1B1ANH7 110 aa6.94□□□□□ -1.3
VPS11-208ENST00000621676 SCGB1A1P11684 91 aa6.94□□□□□ -1.3
VPS11-208ENST00000621676 J3QR89 54 aa6.94□□□□□ -1.3
VPS11-208ENST00000621676 SPANXDQ9BXN6 97 aa6.94□□□□□ -1.3
VPS11-208ENST00000621676 SPANXCQ9NY87 97 aa6.94□□□□□ -1.3
VPS11-208ENST00000621676 APLNQ9ULZ1 77 aa6.94□□□□□ -1.3
VPS11-208ENST00000621676 SMCPP49901 116 aaPredicted RBP6.93□□□□□ -1.3
VPS11-208ENST00000621676 CARD19Q96LW7 228 aa6.93□□□□□ -1.3
VPS11-208ENST00000621676 TRBV10-3A0A0K0K1G6 114 aa6.93□□□□□ -1.3
VPS11-208ENST00000621676 SLC25A20O43772 301 aa6.93□□□□□ -1.3
VPS11-208ENST00000621676 PRO0461Q9UI25 63 aa6.93□□□□□ -1.3
VPS11-208ENST00000621676 DNAH3Q8TD57 4116 aa6.93□□□□□ -1.3
VPS11-208ENST00000621676 SERTAD4-AS1Q5TG53 156 aa6.91□□□□□ -1.3
VPS11-208ENST00000621676 ANKRD29Q8N6D5 301 aa6.91□□□□□ -1.3
VPS11-208ENST00000621676 DNAL4O96015 105 aa6.91□□□□□ -1.3
VPS11-208ENST00000621676 A0A096LNI7 61 aa6.9□□□□□ -1.3
VPS11-208ENST00000621676 A0A0B4J2C4 111 aa6.9□□□□□ -1.31
VPS11-208ENST00000621676 IFITM1P13164 125 aa6.9□□□□□ -1.31
VPS11-208ENST00000621676 KRTAP26-1Q6PEX3 210 aa6.89□□□□□ -1.31
VPS11-208ENST00000621676 C9orf129Q5T035 196 aaKnown RBP6.89□□□□□ -1.31
VPS11-208ENST00000621676 NKAPP1Q8N9T2 125 aa6.89□□□□□ -1.31
VPS11-208ENST00000621676 H3BNG1 76 aa6.88□□□□□ -1.31
VPS11-208ENST00000621676 ATXN8Q156A1 80 aa6.88□□□□□ -1.31
VPS11-208ENST00000621676 TRAV13-2A0A0B4J235 113 aa6.87□□□□□ -1.31
VPS11-208ENST00000621676 BAALC-AS2P0C853 105 aa6.87□□□□□ -1.31
VPS11-208ENST00000621676 MUC7Q8TAX7 377 aa6.87□□□□□ -1.31
VPS11-208ENST00000621676 FAM19A3Q7Z5A8 133 aa6.87□□□□□ -1.31
VPS11-208ENST00000621676 C3orf22Q8N5N4 141 aa6.87□□□□□ -1.31
VPS11-208ENST00000621676 A0A0G2JQZ4 141 aa6.86□□□□□ -1.31
VPS11-208ENST00000621676 A0A1W2PNN7 141 aa6.86□□□□□ -1.31
VPS11-208ENST00000621676 CDIP1Q9H305 208 aa6.86□□□□□ -1.31
VPS11-208ENST00000621676 NBDYA0A0U1RRE5 68 aa6.86□□□□□ -1.31
VPS11-208ENST00000621676 NUPR2A6NF83 97 aa6.85□□□□□ -1.31
VPS11-208ENST00000621676 TIMM17BO60830 172 aa6.85□□□□□ -1.31
VPS11-208ENST00000621676 PANO1I0J062 215 aa6.85□□□□□ -1.31
VPS11-208ENST00000621676 MT-ATP8P03928 68 aa6.85□□□□□ -1.31
VPS11-208ENST00000621676 PPDPFQ9H3Y8 114 aa6.85□□□□□ -1.31
VPS11-208ENST00000621676 NDUFC2-KCTD14E9PQ53 114 aa6.84□□□□□ -1.31
VPS11-208ENST00000621676 C14orf132Q9NPU4 83 aa6.84□□□□□ -1.31
VPS11-208ENST00000621676 LYRM7Q5U5X0 104 aa6.84□□□□□ -1.31
VPS11-208ENST00000621676 UBE2BP63146 152 aa6.84□□□□□ -1.31
VPS11-208ENST00000621676 HIGD2AQ9BW72 106 aa6.84□□□□□ -1.31
VPS11-208ENST00000621676 CXCL5P42830 114 aa6.83□□□□□ -1.32
VPS11-208ENST00000621676 PRLHP81277 87 aa6.83□□□□□ -1.32
VPS11-208ENST00000621676 TRBV30A0A0K0K1B3 111 aa6.83□□□□□ -1.32
VPS11-208ENST00000621676 XGP55808 180 aa6.83□□□□□ -1.32
VPS11-208ENST00000621676 Q6ZQY7 126 aa6.83□□□□□ -1.32
VPS11-208ENST00000621676 TMEM126AQ9H061 195 aa6.83□□□□□ -1.32
VPS11-208ENST00000621676 LAMTOR3Q9UHA4 124 aa6.83□□□□□ -1.32
VPS11-208ENST00000621676 NHLRC4P0CG21 123 aaPredicted RBP6.82□□□□□ -1.32
VPS11-208ENST00000621676 PHF5AQ7RTV0 110 aaKnown RBP6.82□□□□□ -1.32
VPS11-208ENST00000621676 GAGE2AQ6NT46 116 aa6.82□□□□□ -1.32
VPS11-208ENST00000621676 COPS9Q8WXC6 57 aa6.82□□□□□ -1.32
VPS11-208ENST00000621676 TRBV20-1A0A075B6N2 111 aa6.81□□□□□ -1.32
VPS11-208ENST00000621676 HYDINQ4G0P3 5121 aa6.81□□□□□ -1.32
VPS11-208ENST00000621676 RMI2Q96E14 147 aa6.81□□□□□ -1.32
VPS11-208ENST00000621676 LST1O00453 97 aa6.81□□□□□ -1.32
VPS11-208ENST00000621676 C7orf33Q8WU49 177 aa6.81□□□□□ -1.32
VPS11-208ENST00000621676 TNP2Q05952 138 aa6.8□□□□□ -1.32
VPS11-208ENST00000621676 C22orf24Q9Y442 160 aa6.8□□□□□ -1.32
VPS11-208ENST00000621676 TRAV23DV6A0A075B6W5 121 aa6.79□□□□□ -1.32
VPS11-208ENST00000621676 TEN1Q86WV5 123 aa6.79□□□□□ -1.32
VPS11-208ENST00000621676 PPDPFLQ8WWR9 84 aa6.79□□□□□ -1.32
VPS11-208ENST00000621676 TTC32Q5I0X7 151 aa6.79□□□□□ -1.32
VPS11-208ENST00000621676 LINC00167Q96N53 147 aa6.79□□□□□ -1.32
VPS11-208ENST00000621676 LRCOL1A6NCL2 159 aa6.79□□□□□ -1.32
VPS11-208ENST00000621676 ZNF73O43830 326 aaPredicted RBP6.79□□□□□ -1.32
VPS11-208ENST00000621676 VPREB1P12018 145 aa6.78□□□□□ -1.32
VPS11-208ENST00000621676 ST20-AS1Q8NBB2 130 aa6.78□□□□□ -1.32
VPS11-208ENST00000621676 FLG2Q5D862 2391 aaPredicted RBP6.78□□□□□ -1.32
VPS11-208ENST00000621676 GVQW2A0A096LPI5 108 aaPredicted RBP6.78□□□□□ -1.32
VPS11-208ENST00000621676 TRBV10-2A0A0K0K1G8 114 aa6.78□□□□□ -1.32
VPS11-208ENST00000621676 M0QXV9 152 aa6.78□□□□□ -1.32
VPS11-208ENST00000621676 FRAS1Q86XX4 4008 aa6.77□□□□□ -1.33
VPS11-208ENST00000621676 DNAH1Q9P2D7 4330 aa6.77□□□□□ -1.33
VPS11-208ENST00000621676 RPL28P46779 137 aaKnown RBP6.77□□□□□ -1.33
VPS11-208ENST00000621676 COX17Q14061 63 aa6.76□□□□□ -1.33
VPS11-208ENST00000621676 DIRC1Q969H9 104 aa6.76□□□□□ -1.33
VPS11-208ENST00000621676 ANAPC11Q9NYG5 84 aa6.76□□□□□ -1.33
VPS11-208ENST00000621676 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.76□□□□□ -1.33
VPS11-208ENST00000621676 FAM19A1Q7Z5A9 133 aa6.76□□□□□ -1.33
VPS11-208ENST00000621676 KRTAP11-1Q8IUC1 163 aa6.76□□□□□ -1.33
VPS11-208ENST00000621676 KRTAP7-1Q8IUC3 87 aa6.76□□□□□ -1.33
VPS11-208ENST00000621676 VPS13DQ5THJ4 4388 aa6.76□□□□□ -1.33
VPS11-208ENST00000621676 C1orf134Q5TEV5 83 aa6.75□□□□□ -1.33
VPS11-208ENST00000621676 WWC2-AS2Q96NR7 200 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms