RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 DNAH12Q6ZR08 3092 aa6.83□□□□□ -1.32
CLTCL1-211ENST00000621271 A0A087WVE0 104 aa6.83□□□□□ -1.32
CLTCL1-211ENST00000621271 PRO0461Q9UI25 63 aa6.83□□□□□ -1.32
CLTCL1-211ENST00000621271 TRAV7A0A075B6U4 112 aa6.82□□□□□ -1.32
CLTCL1-211ENST00000621271 TET2Q6N021 2002 aaPredicted RBP6.82□□□□□ -1.32
CLTCL1-211ENST00000621271 TRBV7-7A0A0K0K1E9 115 aa6.82□□□□□ -1.32
CLTCL1-211ENST00000621271 MUC4Q99102 2169 aa6.82□□□□□ -1.32
CLTCL1-211ENST00000621271 C11orf72Q8NBR9 251 aa6.82□□□□□ -1.32
CLTCL1-211ENST00000621271 SMCPP49901 116 aaPredicted RBP6.82□□□□□ -1.32
CLTCL1-211ENST00000621271 LINC01547P58512 204 aaPredicted RBP6.81□□□□□ -1.32
CLTCL1-211ENST00000621271 KIF25-AS1Q9Y6Z4 181 aa6.81□□□□□ -1.32
CLTCL1-211ENST00000621271 TRANK1O15050 2925 aa6.81□□□□□ -1.32
CLTCL1-211ENST00000621271 A0A087WYN8 130 aa6.8□□□□□ -1.32
CLTCL1-211ENST00000621271 CRYGAP11844 174 aa6.8□□□□□ -1.32
CLTCL1-211ENST00000621271 LINC00208Q96KT6 92 aa6.8□□□□□ -1.32
CLTCL1-211ENST00000621271 Q6ZRP5 223 aa6.8□□□□□ -1.32
CLTCL1-211ENST00000621271 SPATA3Q8NHX4 192 aa6.8□□□□□ -1.32
CLTCL1-211ENST00000621271 USP24Q9UPU5 2620 aa6.8□□□□□ -1.32
CLTCL1-211ENST00000621271 AGRNO00468 2067 aa6.8□□□□□ -1.32
CLTCL1-211ENST00000621271 SPINK1P00995 79 aa6.8□□□□□ -1.32
CLTCL1-211ENST00000621271 ANKRD17O75179 2603 aaKnown RBP6.79□□□□□ -1.32
CLTCL1-211ENST00000621271 TRBV7-6A0A0J9YX20 115 aa6.78□□□□□ -1.32
CLTCL1-211ENST00000621271 LINC00575Q6W349 94 aa6.78□□□□□ -1.32
CLTCL1-211ENST00000621271 MOBPQ13875 183 aa6.78□□□□□ -1.32
CLTCL1-211ENST00000621271 TYMSOSQ8TAI1 123 aa6.77□□□□□ -1.33
CLTCL1-211ENST00000621271 DEFB116Q30KQ4 102 aa6.77□□□□□ -1.33
CLTCL1-211ENST00000621271 C1orf195Q5TG92 126 aa6.77□□□□□ -1.33
CLTCL1-211ENST00000621271 LINC00588Q9Y4M8 146 aa6.77□□□□□ -1.33
CLTCL1-211ENST00000621271 LINC00167Q96N53 147 aa6.76□□□□□ -1.33
CLTCL1-211ENST00000621271 LINC00846Q9NV44 126 aa6.75□□□□□ -1.33
CLTCL1-211ENST00000621271 IGKV2D-30A0A075B6S6 120 aa6.75□□□□□ -1.33
CLTCL1-211ENST00000621271 IGKV2-30P06310 120 aa6.75□□□□□ -1.33
CLTCL1-211ENST00000621271 Q8NAQ8 132 aa6.75□□□□□ -1.33
CLTCL1-211ENST00000621271 A8MTW9 85 aa6.75□□□□□ -1.33
CLTCL1-211ENST00000621271 PCOTHQ58A44 107 aa6.74□□□□□ -1.33
CLTCL1-211ENST00000621271 RPL37AP61513 92 aaKnown RBP6.74□□□□□ -1.33
CLTCL1-211ENST00000621271 hDV103S1A0JD37 113 aa6.74□□□□□ -1.33
CLTCL1-211ENST00000621271 HCG22E2RYF7 251 aa6.73□□□□□ -1.33
CLTCL1-211ENST00000621271 Q8N3U1 123 aa6.73□□□□□ -1.33
CLTCL1-211ENST00000621271 IGHV3OR16-9A0A0B4J2B5 98 aa6.73□□□□□ -1.33
CLTCL1-211ENST00000621271 PHF5AQ7RTV0 110 aaKnown RBP6.73□□□□□ -1.33
CLTCL1-211ENST00000621271 BAHCC1Q9P281 2608 aa6.73□□□□□ -1.33
CLTCL1-211ENST00000621271 C6orf48Q9UBA6 75 aa6.72□□□□□ -1.33
CLTCL1-211ENST00000621271 K7EIL1 84 aa6.72□□□□□ -1.33
CLTCL1-211ENST00000621271 IGLV5-39A0A0G2JS06 123 aa6.72□□□□□ -1.33
CLTCL1-211ENST00000621271 MGAM2Q2M2H8 2515 aa6.72□□□□□ -1.33
CLTCL1-211ENST00000621271 H0Y9P7 68 aa6.7□□□□□ -1.34
CLTCL1-211ENST00000621271 CHTF8P0CG12 524 aa6.7□□□□□ -1.34
CLTCL1-211ENST00000621271 SOSTDC1Q6X4U4 206 aa6.7□□□□□ -1.34
CLTCL1-211ENST00000621271 FAM19A4Q96LR4 140 aa6.7□□□□□ -1.34
CLTCL1-211ENST00000621271 KIAA0087Q14695 138 aa6.7□□□□□ -1.34
CLTCL1-211ENST00000621271 Q8NBF4 154 aa6.7□□□□□ -1.34
CLTCL1-211ENST00000621271 TNRC18O15417 2968 aaPredicted RBP6.68□□□□□ -1.34
CLTCL1-211ENST00000621271 RPS28P62857 69 aaKnown RBP6.68□□□□□ -1.34
CLTCL1-211ENST00000621271 COX6B2Q6YFQ2 88 aa6.68□□□□□ -1.34
CLTCL1-211ENST00000621271 A0A0C4DFX4 3053 aa6.68□□□□□ -1.34
CLTCL1-211ENST00000621271 PMAIP1Q13794 54 aa6.68□□□□□ -1.34
CLTCL1-211ENST00000621271 ATP11AUNQ6ZP68 121 aa6.68□□□□□ -1.34
CLTCL1-211ENST00000621271 EPM2AB3EWF7 344 aa6.67□□□□□ -1.34
CLTCL1-211ENST00000621271 TMEM254Q8TBM7 123 aa6.67□□□□□ -1.34
CLTCL1-211ENST00000621271 DNAH10OSP0CZ25 163 aa6.67□□□□□ -1.34
CLTCL1-211ENST00000621271 IGLV5-45A0A087WSX0 123 aa6.66□□□□□ -1.34
CLTCL1-211ENST00000621271 C7orf65Q6ZTY9 151 aa6.66□□□□□ -1.34
CLTCL1-211ENST00000621271 MKI67P46013 3256 aaKnown RBP6.66□□□□□ -1.34
CLTCL1-211ENST00000621271 KRTAP10-11P60412 298 aa6.66□□□□□ -1.34
CLTCL1-211ENST00000621271 CXCL6P80162 114 aa6.66□□□□□ -1.34
CLTCL1-211ENST00000621271 CHD6Q8TD26 2715 aa6.66□□□□□ -1.34
CLTCL1-211ENST00000621271 GVQW2A0A096LPI5 108 aaPredicted RBP6.65□□□□□ -1.34
CLTCL1-211ENST00000621271 BCE1O60756 84 aa6.65□□□□□ -1.34
CLTCL1-211ENST00000621271 LINC00336Q6ZUF6 198 aa6.64□□□□□ -1.35
CLTCL1-211ENST00000621271 PRO0628Q9UI54 55 aa6.64□□□□□ -1.35
CLTCL1-211ENST00000621271 LAMA3Q16787 3333 aa6.64□□□□□ -1.35
CLTCL1-211ENST00000621271 FAM218AQ96MZ4 157 aa6.64□□□□□ -1.35
CLTCL1-211ENST00000621271 Q6ZRX8 168 aa6.63□□□□□ -1.35
CLTCL1-211ENST00000621271 LINC00313P59037 77 aa6.63□□□□□ -1.35
CLTCL1-211ENST00000621271 CFAP46Q8IYW2 2715 aa6.63□□□□□ -1.35
CLTCL1-211ENST00000621271 C1orf64Q8NEQ6 169 aa6.63□□□□□ -1.35
CLTCL1-211ENST00000621271 TP53AIP1Q9HCN2 124 aa6.62□□□□□ -1.35
CLTCL1-211ENST00000621271 C19orf73Q9NVV2 129 aa6.62□□□□□ -1.35
CLTCL1-211ENST00000621271 MAST4O15021 2626 aa6.61□□□□□ -1.35
CLTCL1-211ENST00000621271 ELOF1P60002 83 aaKnown RBP6.61□□□□□ -1.35
CLTCL1-211ENST00000621271 Q96NJ1 140 aa6.61□□□□□ -1.35
CLTCL1-211ENST00000621271 LITAFQ99732 161 aa6.6□□□□□ -1.35
CLTCL1-211ENST00000621271 SMR3BP02814 79 aaPredicted RBP6.6□□□□□ -1.35
CLTCL1-211ENST00000621271 LINC00476Q8WZB0 136 aa6.6□□□□□ -1.35
CLTCL1-211ENST00000621271 ATRQ13535 2644 aa6.59□□□□□ -1.35
CLTCL1-211ENST00000621271 Q9UF83 564 aa6.59□□□□□ -1.35
CLTCL1-211ENST00000621271 PSPHP1O15172 72 aa6.59□□□□□ -1.35
CLTCL1-211ENST00000621271 C4orf26Q17RF5 130 aa6.58□□□□□ -1.36
CLTCL1-211ENST00000621271 A0A1B0GW54 56 aa6.58□□□□□ -1.36
CLTCL1-211ENST00000621271 A0A096LNT2 108 aa6.57□□□□□ -1.36
CLTCL1-211ENST00000621271 A0A087WTM6 91 aa6.57□□□□□ -1.36
CLTCL1-211ENST00000621271 KLK9Q2XQG4 91 aa6.57□□□□□ -1.36
CLTCL1-211ENST00000621271 LINC00304Q8N9R0 145 aa6.57□□□□□ -1.36
CLTCL1-211ENST00000621271 TM2D3Q9BRN9 247 aa6.57□□□□□ -1.36
CLTCL1-211ENST00000621271 ST20-AS1Q8NBB2 130 aa6.56□□□□□ -1.36
CLTCL1-211ENST00000621271 SPAG11AQ6PDA7 123 aa6.56□□□□□ -1.36
CLTCL1-211ENST00000621271 SMIM29Q86T20 159 aa6.55□□□□□ -1.36
CLTCL1-211ENST00000621271 CSNK1G2-AS1Q8NCQ2 148 aa6.55□□□□□ -1.36
CLTCL1-211ENST00000621271 KRTAP10-3P60369 221 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 720.5 ms