RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 IGLC3P0DOY3 106 aa6.66□□□□□ -1.34
CPNE3-210ENST00000621245 CRYGAP11844 174 aa6.66□□□□□ -1.34
CPNE3-210ENST00000621245 VPREB1P12018 145 aa6.66□□□□□ -1.34
CPNE3-210ENST00000621245 FABP9Q0Z7S8 132 aa6.66□□□□□ -1.34
CPNE3-210ENST00000621245 UQCC3Q6UW78 93 aa6.66□□□□□ -1.34
CPNE3-210ENST00000621245 FA2HQ7L5A8 372 aa6.66□□□□□ -1.34
CPNE3-210ENST00000621245 NKAPP1Q8N9T2 125 aa6.65□□□□□ -1.34
CPNE3-210ENST00000621245 SEC11CQ9BY50 192 aa6.65□□□□□ -1.34
CPNE3-210ENST00000621245 S100PP25815 95 aa6.64□□□□□ -1.35
CPNE3-210ENST00000621245 UBE2AP49459 152 aa6.64□□□□□ -1.35
CPNE3-210ENST00000621245 NDUFA6P56556 154 aa6.64□□□□□ -1.35
CPNE3-210ENST00000621245 COMMD7Q86VX2 200 aa6.64□□□□□ -1.35
CPNE3-210ENST00000621245 KRTAP19-1Q8IUB9 90 aa6.64□□□□□ -1.35
CPNE3-210ENST00000621245 ZNF625Q96I27 306 aaPredicted RBP6.64□□□□□ -1.35
CPNE3-210ENST00000621245 SND1-IT1Q9HBX3 110 aa6.64□□□□□ -1.35
CPNE3-210ENST00000621245 SMCO4Q9NRQ5 59 aa6.64□□□□□ -1.35
CPNE3-210ENST00000621245 C11orf86A6NJI1 115 aa6.63□□□□□ -1.35
CPNE3-210ENST00000621245 ATP5LO75964 103 aa6.63□□□□□ -1.35
CPNE3-210ENST00000621245 C10orf91Q5T1B1 145 aa6.63□□□□□ -1.35
CPNE3-210ENST00000621245 C18orf32Q8TCD1 76 aa6.63□□□□□ -1.35
CPNE3-210ENST00000621245 ERG28Q9UKR5 140 aa6.63□□□□□ -1.35
CPNE3-210ENST00000621245 H3BRM9 83 aa6.62□□□□□ -1.35
CPNE3-210ENST00000621245 M0R378 163 aa6.62□□□□□ -1.35
CPNE3-210ENST00000621245 C3orf22Q8N5N4 141 aa6.62□□□□□ -1.35
CPNE3-210ENST00000621245 TMEM126AQ9H061 195 aa6.62□□□□□ -1.35
CPNE3-210ENST00000621245 FAM19A1Q7Z5A9 133 aa6.61□□□□□ -1.35
CPNE3-210ENST00000621245 LINC00304Q8N9R0 145 aa6.61□□□□□ -1.35
CPNE3-210ENST00000621245 RPS10P5Q9NQ39 176 aa6.61□□□□□ -1.35
CPNE3-210ENST00000621245 LINC01549A6NIU2 74 aa6.6□□□□□ -1.35
CPNE3-210ENST00000621245 FAM229BQ4G0N7 80 aa6.6□□□□□ -1.35
CPNE3-210ENST00000621245 HBDP02042 147 aa6.59□□□□□ -1.35
CPNE3-210ENST00000621245 RHEBQ15382 184 aa6.59□□□□□ -1.35
CPNE3-210ENST00000621245 A0A0U1RRA0 63 aa6.58□□□□□ -1.36
CPNE3-210ENST00000621245 LINC00614P0C842 121 aa6.58□□□□□ -1.36
CPNE3-210ENST00000621245 COX19Q49B96 90 aa6.58□□□□□ -1.36
CPNE3-210ENST00000621245 BAGE3Q86Y29 109 aa6.58□□□□□ -1.36
CPNE3-210ENST00000621245 TRAPPC1Q9Y5R8 145 aa6.58□□□□□ -1.36
CPNE3-210ENST00000621245 TMEM170BQ5T4T1 132 aa6.57□□□□□ -1.36
CPNE3-210ENST00000621245 PET117Q6UWS5 81 aa6.57□□□□□ -1.36
CPNE3-210ENST00000621245 PLEKHB2Q96CS7 222 aa6.57□□□□□ -1.36
CPNE3-210ENST00000621245 IGKV2D-26A0A0A0MRZ7 120 aa6.56□□□□□ -1.36
CPNE3-210ENST00000621245 RPL24P83731 157 aaKnown RBP6.55□□□□□ -1.36
CPNE3-210ENST00000621245 COX17Q14061 63 aa6.55□□□□□ -1.36
CPNE3-210ENST00000621245 CBLN2Q8IUK8 224 aa6.55□□□□□ -1.36
CPNE3-210ENST00000621245 YPEL4Q96NS1 127 aa6.55□□□□□ -1.36
CPNE3-210ENST00000621245 HIGD2AQ9BW72 106 aa6.55□□□□□ -1.36
CPNE3-210ENST00000621245 CHTOPQ9Y3Y2 248 aaKnown RBP6.55□□□□□ -1.36
CPNE3-210ENST00000621245 TMEM223A0PJW6 202 aa6.54□□□□□ -1.36
CPNE3-210ENST00000621245 SMIM13P0DJ93 91 aa6.54□□□□□ -1.36
CPNE3-210ENST00000621245 LINC00158P58513 81 aa6.54□□□□□ -1.36
CPNE3-210ENST00000621245 SPRR4Q96PI1 79 aa6.54□□□□□ -1.36
CPNE3-210ENST00000621245 IGLV7-46A0A075B6I9 117 aa6.53□□□□□ -1.36
CPNE3-210ENST00000621245 NCR3O14931 201 aa6.53□□□□□ -1.36
CPNE3-210ENST00000621245 TPRXLQ17RH7 258 aa6.53□□□□□ -1.36
CPNE3-210ENST00000621245 APOC3P02656 99 aa6.52□□□□□ -1.37
CPNE3-210ENST00000621245 DAND5Q8N907 189 aa6.52□□□□□ -1.37
CPNE3-210ENST00000621245 KRTAP4-12Q9BQ66 201 aa6.52□□□□□ -1.37
CPNE3-210ENST00000621245 TSPEAR-AS2P59090 65 aa6.51□□□□□ -1.37
CPNE3-210ENST00000621245 KRTAP4-8Q9BYQ9 185 aa6.51□□□□□ -1.37
CPNE3-210ENST00000621245 KRTAP9-7A8MTY7 169 aa6.5□□□□□ -1.37
CPNE3-210ENST00000621245 KRTAP4-16G5E9R7 235 aaPredicted RBP6.5□□□□□ -1.37
CPNE3-210ENST00000621245 BOD1L2Q8IYS8 172 aa6.5□□□□□ -1.37
CPNE3-210ENST00000621245 MIR7-3HGQ8N6C7 128 aa6.5□□□□□ -1.37
CPNE3-210ENST00000621245 PPDPFQ9H3Y8 114 aa6.5□□□□□ -1.37
CPNE3-210ENST00000621245 TRAV12-1A0A0B4J245 112 aa6.49□□□□□ -1.37
CPNE3-210ENST00000621245 A0A0U1RQV1 116 aa6.49□□□□□ -1.37
CPNE3-210ENST00000621245 SPRR1AP35321 89 aa6.49□□□□□ -1.37
CPNE3-210ENST00000621245 FAM19A2Q8N3H0 131 aa6.49□□□□□ -1.37
CPNE3-210ENST00000621245 SMCR5Q8TEV8 140 aa6.49□□□□□ -1.37
CPNE3-210ENST00000621245 IFI27L1Q96BM0 104 aa6.49□□□□□ -1.37
CPNE3-210ENST00000621245 A4D1N5 150 aa6.48□□□□□ -1.37
CPNE3-210ENST00000621245 UBE2V1Q13404 147 aa6.48□□□□□ -1.37
CPNE3-210ENST00000621245 MEIG1Q5JSS6 88 aa6.48□□□□□ -1.37
CPNE3-210ENST00000621245 SFTA2Q6UW10 78 aa6.48□□□□□ -1.37
CPNE3-210ENST00000621245 Q8NBF4 154 aa6.48□□□□□ -1.37
CPNE3-210ENST00000621245 PAM16Q9Y3D7 125 aa6.48□□□□□ -1.37
CPNE3-210ENST00000621245 TRBV10-3A0A0K0K1G6 114 aa6.47□□□□□ -1.37
CPNE3-210ENST00000621245 H0Y8G0 127 aa6.47□□□□□ -1.37
CPNE3-210ENST00000621245 ERC2-IT1O76042 136 aa6.47□□□□□ -1.37
CPNE3-210ENST00000621245 LCE4AQ5TA78 99 aa6.47□□□□□ -1.37
CPNE3-210ENST00000621245 CHCHD1Q96BP2 118 aaKnown RBP6.47□□□□□ -1.37
CPNE3-210ENST00000621245 KRTAP4-1Q9BYQ7 146 aa6.47□□□□□ -1.37
CPNE3-210ENST00000621245 SNRPEP62304 92 aaKnown RBP6.46□□□□□ -1.38
CPNE3-210ENST00000621245 LINC00337Q8N6G1 96 aa6.46□□□□□ -1.38
CPNE3-210ENST00000621245 MPLKIPQ8TAP9 179 aa6.46□□□□□ -1.38
CPNE3-210ENST00000621245 KCNQ1DNQ9H478 68 aa6.46□□□□□ -1.38
CPNE3-210ENST00000621245 SNAPINO95295 136 aa6.45□□□□□ -1.38
CPNE3-210ENST00000621245 KRTAP13-3Q3SY46 172 aa6.45□□□□□ -1.38
CPNE3-210ENST00000621245 SVBPQ8N300 66 aa6.45□□□□□ -1.38
CPNE3-210ENST00000621245 NDUFA12Q9UI09 145 aa6.45□□□□□ -1.38
CPNE3-210ENST00000621245 LINC00483Q53H64 154 aa6.44□□□□□ -1.38
CPNE3-210ENST00000621245 Q9BRP9 147 aa6.44□□□□□ -1.38
CPNE3-210ENST00000621245 ETDCA0A1B0GVM5 59 aa6.43□□□□□ -1.38
CPNE3-210ENST00000621245 SPAG11AQ6PDA7 123 aa6.43□□□□□ -1.38
CPNE3-210ENST00000621245 PMCHL2Q9BQD1 86 aa6.43□□□□□ -1.38
CPNE3-210ENST00000621245 ZNF706Q9Y5V0 76 aaPredicted RBP6.43□□□□□ -1.38
CPNE3-210ENST00000621245 ATP6V1G1O75348 118 aa6.42□□□□□ -1.38
CPNE3-210ENST00000621245 HSBP1O75506 76 aa6.42□□□□□ -1.38
CPNE3-210ENST00000621245 SEC61BP60468 96 aaKnown RBP6.42□□□□□ -1.38
CPNE3-210ENST00000621245 HERV-K104P63124 156 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms