RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 DEFB114Q30KQ6 69 aa9.6□□□□□ -0.87
CNTNAP3B-215ENST00000619138 NANOS2P60321 138 aaKnown RBP9.59□□□□□ -0.87
CNTNAP3B-215ENST00000619138 CCKP06307 115 aa9.59□□□□□ -0.87
CNTNAP3B-215ENST00000619138 XAGE1AQ9HD64 81 aa9.59□□□□□ -0.87
CNTNAP3B-215ENST00000619138 Q8N9L7 120 aa9.58□□□□□ -0.88
CNTNAP3B-215ENST00000619138 TRBV6-4A0A1B0GX49 114 aa9.56□□□□□ -0.88
CNTNAP3B-215ENST00000619138 IBA57-AS1B1ANH7 110 aa9.56□□□□□ -0.88
CNTNAP3B-215ENST00000619138 LINC00482Q8N8I6 264 aa9.56□□□□□ -0.88
CNTNAP3B-215ENST00000619138 TRBV10-1A0A0K0K1A3 114 aa9.56□□□□□ -0.88
CNTNAP3B-215ENST00000619138 GYPEP15421 78 aa9.56□□□□□ -0.88
CNTNAP3B-215ENST00000619138 M0R2N4 97 aa9.55□□□□□ -0.88
CNTNAP3B-215ENST00000619138 TRBV6-8A0A0A6YYG3 113 aa9.55□□□□□ -0.88
CNTNAP3B-215ENST00000619138 Q8N3U1 123 aa9.54□□□□□ -0.88
CNTNAP3B-215ENST00000619138 Q8N814 137 aa9.54□□□□□ -0.88
CNTNAP3B-215ENST00000619138 CELA1Q9UNI1 258 aa9.54□□□□□ -0.88
CNTNAP3B-215ENST00000619138 LINC00959A0A1B0GUT2 108 aa9.54□□□□□ -0.88
CNTNAP3B-215ENST00000619138 JMJD7-PLA2G4BH0Y9G9 81 aa9.54□□□□□ -0.88
CNTNAP3B-215ENST00000619138 C3orf84H3BNL1 204 aa9.54□□□□□ -0.88
CNTNAP3B-215ENST00000619138 TMEM256-PLSCR3K7ERE1 68 aa9.54□□□□□ -0.88
CNTNAP3B-215ENST00000619138 TRAV10A0A0B4J240 114 aa9.54□□□□□ -0.88
CNTNAP3B-215ENST00000619138 IGHV3OR16-9A0A0B4J2B5 98 aa9.54□□□□□ -0.88
CNTNAP3B-215ENST00000619138 Q6ZQY7 126 aa9.54□□□□□ -0.88
CNTNAP3B-215ENST00000619138 C16orf95Q9H693 158 aa9.54□□□□□ -0.88
CNTNAP3B-215ENST00000619138 RPS28P62857 69 aaKnown RBP9.53□□□□□ -0.88
CNTNAP3B-215ENST00000619138 DEFB135Q30KP9 77 aa9.53□□□□□ -0.88
CNTNAP3B-215ENST00000619138 LINC00336Q6ZUF6 198 aa9.53□□□□□ -0.88
CNTNAP3B-215ENST00000619138 LINC00474Q9P2X8 69 aa9.53□□□□□ -0.88
CNTNAP3B-215ENST00000619138 CYSRT1A8MQ03 144 aa9.51□□□□□ -0.89
CNTNAP3B-215ENST00000619138 KRTAP10-3P60369 221 aa9.51□□□□□ -0.89
CNTNAP3B-215ENST00000619138 A0A087WZ39 114 aa9.5□□□□□ -0.89
CNTNAP3B-215ENST00000619138 C1orf195Q5TG92 126 aa9.5□□□□□ -0.89
CNTNAP3B-215ENST00000619138 Q5XG85 94 aa9.49□□□□□ -0.89
CNTNAP3B-215ENST00000619138 C6orf223Q8N319 242 aa9.49□□□□□ -0.89
CNTNAP3B-215ENST00000619138 SPTSSBQ8NFR3 76 aa9.49□□□□□ -0.89
CNTNAP3B-215ENST00000619138 V9GYY9 64 aa9.49□□□□□ -0.89
CNTNAP3B-215ENST00000619138 NDUFC2O95298 119 aa9.49□□□□□ -0.89
CNTNAP3B-215ENST00000619138 SPATA3Q8NHX4 192 aa9.48□□□□□ -0.89
CNTNAP3B-215ENST00000619138 NREPQ16612 68 aa9.48□□□□□ -0.89
CNTNAP3B-215ENST00000619138 AKAP9Q99996 3911 aa9.47□□□□□ -0.89
CNTNAP3B-215ENST00000619138 PSPHP1O15172 72 aa9.47□□□□□ -0.89
CNTNAP3B-215ENST00000619138 LINC01547P58512 204 aaPredicted RBP9.46□□□□□ -0.9
CNTNAP3B-215ENST00000619138 HIGD2BQ4VC39 106 aa9.46□□□□□ -0.9
CNTNAP3B-215ENST00000619138 UNQ6190/PRO20217Q6UXQ8 127 aa9.45□□□□□ -0.9
CNTNAP3B-215ENST00000619138 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.45□□□□□ -0.9
CNTNAP3B-215ENST00000619138 C16orf74Q96GX8 76 aa9.45□□□□□ -0.9
CNTNAP3B-215ENST00000619138 NDUFC2-KCTD14E9PQ53 114 aa9.45□□□□□ -0.9
CNTNAP3B-215ENST00000619138 Q6ZVQ6 151 aa9.45□□□□□ -0.9
CNTNAP3B-215ENST00000619138 TM2D3Q9BRN9 247 aa9.45□□□□□ -0.9
CNTNAP3B-215ENST00000619138 KLK12Q9UKR0 248 aa9.45□□□□□ -0.9
CNTNAP3B-215ENST00000619138 ANK3Q12955 4377 aaKnown RBP9.45□□□□□ -0.9
CNTNAP3B-215ENST00000619138 CHCHD10Q8WYQ3 142 aaPredicted RBP9.44□□□□□ -0.9
CNTNAP3B-215ENST00000619138 FAM30AQ9NZY2 134 aa9.43□□□□□ -0.9
CNTNAP3B-215ENST00000619138 FUSP35637 526 aaKnown RBP eCLIP9.42□□□□□ -0.9
CNTNAP3B-215ENST00000619138 ZNF561-AS1K7EIQ3 104 aa9.42□□□□□ -0.9
CNTNAP3B-215ENST00000619138 C10orf25Q5T742 122 aa9.42□□□□□ -0.9
CNTNAP3B-215ENST00000619138 TENM1Q9UKZ4 2725 aa9.42□□□□□ -0.9
CNTNAP3B-215ENST00000619138 SMIM26A0A096LP01 95 aa9.42□□□□□ -0.9
CNTNAP3B-215ENST00000619138 TRBV7-6A0A0J9YX20 115 aa9.42□□□□□ -0.9
CNTNAP3B-215ENST00000619138 SPAG11BQ08648 103 aa9.42□□□□□ -0.9
CNTNAP3B-215ENST00000619138 MIFP14174 115 aa9.41□□□□□ -0.9
CNTNAP3B-215ENST00000619138 TRAV7A0A075B6U4 112 aa9.41□□□□□ -0.9
CNTNAP3B-215ENST00000619138 H7BZZ5 65 aa9.41□□□□□ -0.9
CNTNAP3B-215ENST00000619138 ATP5EP2Q5VTU8 51 aa9.41□□□□□ -0.9
CNTNAP3B-215ENST00000619138 IGLV1-51P01701 117 aa9.4□□□□□ -0.9
CNTNAP3B-215ENST00000619138 OBSCN-AS1Q96MR7 158 aa9.4□□□□□ -0.9
CNTNAP3B-215ENST00000619138 Q8NDZ9 215 aa9.4□□□□□ -0.9
CNTNAP3B-215ENST00000619138 SERP1Q9Y6X1 66 aa9.4□□□□□ -0.91
CNTNAP3B-215ENST00000619138 REG3AQ06141 175 aa9.39□□□□□ -0.91
CNTNAP3B-215ENST00000619138 PRO0628Q9UI54 55 aa9.39□□□□□ -0.91
CNTNAP3B-215ENST00000619138 A0A0J9YWU9 116 aa9.39□□□□□ -0.91
CNTNAP3B-215ENST00000619138 KRTAP24-1Q3LI83 254 aa9.39□□□□□ -0.91
CNTNAP3B-215ENST00000619138 BPY2O14599 106 aa9.38□□□□□ -0.91
CNTNAP3B-215ENST00000619138 LINC00575Q6W349 94 aa9.38□□□□□ -0.91
CNTNAP3B-215ENST00000619138 Q8IZM0 81 aa9.38□□□□□ -0.91
CNTNAP3B-215ENST00000619138 Q6ZQT0 140 aa9.38□□□□□ -0.91
CNTNAP3B-215ENST00000619138 DEFB116Q30KQ4 102 aa9.37□□□□□ -0.91
CNTNAP3B-215ENST00000619138 C9orf66Q5T8R8 295 aa9.37□□□□□ -0.91
CNTNAP3B-215ENST00000619138 TRBV10-3A0A0K0K1G6 114 aa9.37□□□□□ -0.91
CNTNAP3B-215ENST00000619138 FAM19A3Q7Z5A8 133 aa9.37□□□□□ -0.91
CNTNAP3B-215ENST00000619138 GIG44P09565 113 aaPredicted RBP9.36□□□□□ -0.91
CNTNAP3B-215ENST00000619138 OXLD1Q5BKU9 147 aa9.36□□□□□ -0.91
CNTNAP3B-215ENST00000619138 DIRC1Q969H9 104 aa9.35□□□□□ -0.91
CNTNAP3B-215ENST00000619138 VWFP04275 2813 aa9.35□□□□□ -0.91
CNTNAP3B-215ENST00000619138 CMC4P56277 68 aaPredicted RBP9.35□□□□□ -0.91
CNTNAP3B-215ENST00000619138 PLAC8L1A1L4L8 177 aa9.35□□□□□ -0.91
CNTNAP3B-215ENST00000619138 LYPD5Q6UWN5 251 aa9.35□□□□□ -0.91
CNTNAP3B-215ENST00000619138 CAMK2N2Q96S95 79 aa9.35□□□□□ -0.91
CNTNAP3B-215ENST00000619138 A0A096LNI7 61 aa9.34□□□□□ -0.91
CNTNAP3B-215ENST00000619138 SEC61GP60059 68 aa9.34□□□□□ -0.91
CNTNAP3B-215ENST00000619138 MUC7Q8TAX7 377 aa9.33□□□□□ -0.92
CNTNAP3B-215ENST00000619138 HIGD2AQ9BW72 106 aa9.33□□□□□ -0.92
CNTNAP3B-215ENST00000619138 CD164L2Q6UWJ8 174 aa9.32□□□□□ -0.92
CNTNAP3B-215ENST00000619138 TMEM254Q8TBM7 123 aa9.32□□□□□ -0.92
CNTNAP3B-215ENST00000619138 RETNQ9HD89 108 aa9.32□□□□□ -0.92
CNTNAP3B-215ENST00000619138 PRO0255Q9UI72 69 aa9.32□□□□□ -0.92
CNTNAP3B-215ENST00000619138 NKAPP1Q8N9T2 125 aa9.32□□□□□ -0.92
CNTNAP3B-215ENST00000619138 COX7BP24311 80 aa9.31□□□□□ -0.92
CNTNAP3B-215ENST00000619138 IL17DQ8TAD2 202 aa9.31□□□□□ -0.92
CNTNAP3B-215ENST00000619138 FP248Q71RG6 208 aaPredicted RBP9.31□□□□□ -0.92
CNTNAP3B-215ENST00000619138 WFDC13Q8IUB5 93 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms