RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 LINC01556Q5JQF7 62 aa11.41□□□□□ -0.58
CNTNAP3B-214ENST00000618777 IGLV1-51P01701 117 aa11.4□□□□□ -0.58
CNTNAP3B-214ENST00000618777 UQCR11O14957 56 aa11.4□□□□□ -0.59
CNTNAP3B-214ENST00000618777 HIVEP3Q5T1R4 2406 aa11.39□□□□□ -0.59
CNTNAP3B-214ENST00000618777 CEP192Q8TEP8 1941 aa11.38□□□□□ -0.59
CNTNAP3B-214ENST00000618777 SSBP3-AS1Q7Z2R9 100 aa11.37□□□□□ -0.59
CNTNAP3B-214ENST00000618777 LYPD5Q6UWN5 251 aa11.37□□□□□ -0.59
CNTNAP3B-214ENST00000618777 CDC42SE1Q9NRR8 79 aa11.37□□□□□ -0.59
CNTNAP3B-214ENST00000618777 LINC01600Q96MT4 127 aa11.36□□□□□ -0.59
CNTNAP3B-214ENST00000618777 NAV2Q8IVL1 2488 aa11.35□□□□□ -0.59
CNTNAP3B-214ENST00000618777 IGLV8-61A0A075B6I0 122 aa11.35□□□□□ -0.59
CNTNAP3B-214ENST00000618777 COL5A1P20908 1838 aaPredicted RBP11.34□□□□□ -0.59
CNTNAP3B-214ENST00000618777 TRBV7-4A0A0J9YYF1 115 aa11.34□□□□□ -0.59
CNTNAP3B-214ENST00000618777 LINC00476Q8WZB0 136 aa11.34□□□□□ -0.59
CNTNAP3B-214ENST00000618777 EP400Q96L91 3159 aa11.33□□□□□ -0.6
CNTNAP3B-214ENST00000618777 Q1T7F1 81 aa11.32□□□□□ -0.6
CNTNAP3B-214ENST00000618777 LINC00167Q96N53 147 aa11.32□□□□□ -0.6
CNTNAP3B-214ENST00000618777 PTPRBP23467 1997 aa11.31□□□□□ -0.6
CNTNAP3B-214ENST00000618777 INAFM1C9JVW0 142 aa11.3□□□□□ -0.6
CNTNAP3B-214ENST00000618777 MOBPQ13875 183 aa11.3□□□□□ -0.6
CNTNAP3B-214ENST00000618777 Q6ZRX8 168 aa11.29□□□□□ -0.6
CNTNAP3B-214ENST00000618777 AVPP01185 164 aa11.29□□□□□ -0.6
CNTNAP3B-214ENST00000618777 MIR22HGQ0VDD5 57 aa11.29□□□□□ -0.6
CNTNAP3B-214ENST00000618777 LINC01554Q52M75 96 aa11.29□□□□□ -0.6
CNTNAP3B-214ENST00000618777 ABCA2Q9BZC7 2435 aa11.28□□□□□ -0.6
CNTNAP3B-214ENST00000618777 CCDC168Q8NDH2 2452 aa11.26□□□□□ -0.61
CNTNAP3B-214ENST00000618777 IGLV5-52A0A0A0MRZ9 124 aa11.25□□□□□ -0.61
CNTNAP3B-214ENST00000618777 K7EQZ3 153 aa11.24□□□□□ -0.61
CNTNAP3B-214ENST00000618777 A8MWP4 228 aa11.24□□□□□ -0.61
CNTNAP3B-214ENST00000618777 MUC6Q6W4X9 2439 aa11.24□□□□□ -0.61
CNTNAP3B-214ENST00000618777 RPL37AP61513 92 aaKnown RBP11.23□□□□□ -0.61
CNTNAP3B-214ENST00000618777 TTC28Q96AY4 2481 aa11.22□□□□□ -0.61
CNTNAP3B-214ENST00000618777 UTRNP46939 3433 aa11.22□□□□□ -0.61
CNTNAP3B-214ENST00000618777 CRIPTQ9P021 101 aa11.21□□□□□ -0.61
CNTNAP3B-214ENST00000618777 FP248Q71RG6 208 aaPredicted RBP11.21□□□□□ -0.62
CNTNAP3B-214ENST00000618777 LY6G6CO95867 125 aa11.21□□□□□ -0.62
CNTNAP3B-214ENST00000618777 NUPR2A6NF83 97 aa11.2□□□□□ -0.62
CNTNAP3B-214ENST00000618777 PLA2G1BP04054 148 aaKnown RBP11.2□□□□□ -0.62
CNTNAP3B-214ENST00000618777 LY6G6DO95868 133 aa11.2□□□□□ -0.62
CNTNAP3B-214ENST00000618777 LINC00313P59037 77 aa11.19□□□□□ -0.62
CNTNAP3B-214ENST00000618777 FAM229AH3BQW9 127 aa11.18□□□□□ -0.62
CNTNAP3B-214ENST00000618777 IGLV6-57P01721 117 aa11.18□□□□□ -0.62
CNTNAP3B-214ENST00000618777 ADAMTS20P59510 1910 aa11.18□□□□□ -0.62
CNTNAP3B-214ENST00000618777 PCNTO95613 3336 aa11.18□□□□□ -0.62
CNTNAP3B-214ENST00000618777 ST20-AS1Q8NBB2 130 aa11.17□□□□□ -0.62
CNTNAP3B-214ENST00000618777 EIF4EBP3O60516 100 aaPredicted RBP11.16□□□□□ -0.62
CNTNAP3B-214ENST00000618777 MRPL34Q9BQ48 92 aaKnown RBP11.16□□□□□ -0.62
CNTNAP3B-214ENST00000618777 TET2Q6N021 2002 aaPredicted RBP11.15□□□□□ -0.62
CNTNAP3B-214ENST00000618777 COL4A4P53420 1690 aaPredicted RBP11.15□□□□□ -0.62
CNTNAP3B-214ENST00000618777 SPANXA2-OT1Q8N9U9 137 aa11.15□□□□□ -0.63
CNTNAP3B-214ENST00000618777 GVQW2A0A096LPI5 108 aaPredicted RBP11.14□□□□□ -0.63
CNTNAP3B-214ENST00000618777 SPACA4Q8TDM5 124 aa11.14□□□□□ -0.63
CNTNAP3B-214ENST00000618777 FN1P02751 2386 aaKnown RBP11.14□□□□□ -0.63
CNTNAP3B-214ENST00000618777 PTPRSQ13332 1948 aa11.11□□□□□ -0.63
CNTNAP3B-214ENST00000618777 C16orf95Q9H693 158 aa11.11□□□□□ -0.63
CNTNAP3B-214ENST00000618777 LRP4O75096 1905 aa11.1□□□□□ -0.63
CNTNAP3B-214ENST00000618777 EPM2AB3EWF7 344 aa11.09□□□□□ -0.63
CNTNAP3B-214ENST00000618777 CYSTM1Q9H1C7 97 aa11.09□□□□□ -0.63
CNTNAP3B-214ENST00000618777 C9orf129Q5T035 196 aaKnown RBP11.08□□□□□ -0.63
CNTNAP3B-214ENST00000618777 Q75L30 129 aa11.06□□□□□ -0.64
CNTNAP3B-214ENST00000618777 LINC00528Q8N1L1 170 aa11.05□□□□□ -0.64
CNTNAP3B-214ENST00000618777 C10orf142B7Z368 130 aa11.04□□□□□ -0.64
CNTNAP3B-214ENST00000618777 CPAMD8Q8IZJ3 1885 aa11.04□□□□□ -0.64
CNTNAP3B-214ENST00000618777 Q6ZRP5 223 aa11.04□□□□□ -0.64
CNTNAP3B-214ENST00000618777 H3BNG1 76 aa11.04□□□□□ -0.64
CNTNAP3B-214ENST00000618777 OXTP01178 125 aa11.04□□□□□ -0.64
CNTNAP3B-214ENST00000618777 F8P00451 2351 aa11.03□□□□□ -0.64
CNTNAP3B-214ENST00000618777 FAM229BQ4G0N7 80 aa11.03□□□□□ -0.64
CNTNAP3B-214ENST00000618777 C1orf134Q5TEV5 83 aa11.03□□□□□ -0.64
CNTNAP3B-214ENST00000618777 LINC00588Q9Y4M8 146 aa11.02□□□□□ -0.65
CNTNAP3B-214ENST00000618777 PRAC1Q96KF2 57 aa11.02□□□□□ -0.65
CNTNAP3B-214ENST00000618777 TLN2Q9Y4G6 2542 aa11.02□□□□□ -0.65
CNTNAP3B-214ENST00000618777 OBSCN-AS1Q96MR7 158 aa11.02□□□□□ -0.65
CNTNAP3B-214ENST00000618777 OCR1Q9BZK8 76 aa11.02□□□□□ -0.65
CNTNAP3B-214ENST00000618777 C8orf17Q9NRJ1 99 aa11.01□□□□□ -0.65
CNTNAP3B-214ENST00000618777 PHF5AQ7RTV0 110 aaKnown RBP11.01□□□□□ -0.65
CNTNAP3B-214ENST00000618777 PIEZO2Q9H5I5 2752 aa11.01□□□□□ -0.65
CNTNAP3B-214ENST00000618777 KCNQ1DNQ9H478 68 aa11□□□□□ -0.65
CNTNAP3B-214ENST00000618777 RAI1Q7Z5J4 1906 aaPredicted RBP11□□□□□ -0.65
CNTNAP3B-214ENST00000618777 C16orf90A8MZG2 172 aa11□□□□□ -0.65
CNTNAP3B-214ENST00000618777 MUC22E2RYF6 1773 aaPredicted RBP10.99□□□□□ -0.65
CNTNAP3B-214ENST00000618777 APLNQ9ULZ1 77 aa10.99□□□□□ -0.65
CNTNAP3B-214ENST00000618777 LTBP2Q14767 1821 aa10.99□□□□□ -0.65
CNTNAP3B-214ENST00000618777 IGFL1Q6UW32 110 aa10.98□□□□□ -0.65
CNTNAP3B-214ENST00000618777 PKD1L2Q7Z442 2459 aa10.97□□□□□ -0.65
CNTNAP3B-214ENST00000618777 A0A1W2PPR1 153 aa10.95□□□□□ -0.66
CNTNAP3B-214ENST00000618777 Q96NJ1 140 aa10.95□□□□□ -0.66
CNTNAP3B-214ENST00000618777 IGLV1-50A0A075B6I6 118 aa10.94□□□□□ -0.66
CNTNAP3B-214ENST00000618777 Q8N9P0 234 aaPredicted RBP10.93□□□□□ -0.66
CNTNAP3B-214ENST00000618777 A0A1B0GVX0 72 aa10.93□□□□□ -0.66
CNTNAP3B-214ENST00000618777 Q8N377 158 aa10.92□□□□□ -0.66
CNTNAP3B-214ENST00000618777 USP9XQ93008 2570 aaPredicted RBP10.92□□□□□ -0.66
CNTNAP3B-214ENST00000618777 ABCA12Q86UK0 2595 aa10.91□□□□□ -0.66
CNTNAP3B-214ENST00000618777 Q5VV11 94 aa10.91□□□□□ -0.66
CNTNAP3B-214ENST00000618777 CEP350Q5VT06 3117 aa10.91□□□□□ -0.66
CNTNAP3B-214ENST00000618777 LUZP6Q538Z0 58 aa10.9□□□□□ -0.66
CNTNAP3B-214ENST00000618777 CENPFP49454 3210 aa10.9□□□□□ -0.67
CNTNAP3B-214ENST00000618777 KLK9Q2XQG4 91 aa10.88□□□□□ -0.67
CNTNAP3B-214ENST00000618777 SETD2Q9BYW2 2564 aaPredicted RBP10.88□□□□□ -0.67
CNTNAP3B-214ENST00000618777 TLN1Q9Y490 2541 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms