RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 USP9XQ93008 2570 aaPredicted RBP10.2□□□□□ -0.78
SRRT-217ENST00000618411 C1orf195Q5TG92 126 aa10.19□□□□□ -0.78
SRRT-217ENST00000618411 OCR1Q9BZK8 76 aa10.19□□□□□ -0.78
SRRT-217ENST00000618411 ANGP03950 147 aaKnown RBP10.19□□□□□ -0.78
SRRT-217ENST00000618411 ESRGQ1W209 222 aa10.18□□□□□ -0.78
SRRT-217ENST00000618411 SPAG11BQ08648 103 aa10.18□□□□□ -0.78
SRRT-217ENST00000618411 A0A096LPF7 62 aa10.17□□□□□ -0.78
SRRT-217ENST00000618411 FUSP35637 526 aaKnown RBP eCLIP10.17□□□□□ -0.78
SRRT-217ENST00000618411 MPLKIPQ8TAP9 179 aa10.17□□□□□ -0.78
SRRT-217ENST00000618411 ZNF73O43830 326 aaPredicted RBP10.16□□□□□ -0.78
SRRT-217ENST00000618411 IGKV4-1P06312 121 aa10.16□□□□□ -0.78
SRRT-217ENST00000618411 SETXQ7Z333 2677 aaKnown RBP10.16□□□□□ -0.78
SRRT-217ENST00000618411 CYSRT1A8MQ03 144 aa10.16□□□□□ -0.78
SRRT-217ENST00000618411 BBC3Q96PG8 261 aaPredicted RBP10.16□□□□□ -0.78
SRRT-217ENST00000618411 IGLV1-51P01701 117 aa10.16□□□□□ -0.78
SRRT-217ENST00000618411 ELOF1P60002 83 aaKnown RBP10.16□□□□□ -0.78
SRRT-217ENST00000618411 Q6ZTC4 211 aa10.16□□□□□ -0.78
SRRT-217ENST00000618411 V9GYY9 64 aa10.15□□□□□ -0.78
SRRT-217ENST00000618411 ANKRD17O75179 2603 aaKnown RBP10.15□□□□□ -0.79
SRRT-217ENST00000618411 ITPR1Q14643 2758 aa10.14□□□□□ -0.79
SRRT-217ENST00000618411 GVQW2A0A096LPI5 108 aaPredicted RBP10.14□□□□□ -0.79
SRRT-217ENST00000618411 DOPEY1Q5JWR5 2465 aa10.14□□□□□ -0.79
SRRT-217ENST00000618411 Q8N9L7 120 aa10.13□□□□□ -0.79
SRRT-217ENST00000618411 NCOR2Q9Y618 2525 aa10.13□□□□□ -0.79
SRRT-217ENST00000618411 CELA1Q9UNI1 258 aa10.11□□□□□ -0.79
SRRT-217ENST00000618411 NBPF19A0A087WUL8 3843 aa10.1□□□□□ -0.79
SRRT-217ENST00000618411 FBN2P35556 2912 aa10.09□□□□□ -0.79
SRRT-217ENST00000618411 HIGD2AQ9BW72 106 aa10.09□□□□□ -0.79
SRRT-217ENST00000618411 XAGE1AQ9HD64 81 aa10.09□□□□□ -0.79
SRRT-217ENST00000618411 TEX15Q9BXT5 2789 aa10.08□□□□□ -0.8
SRRT-217ENST00000618411 SEC61GP60059 68 aa10.08□□□□□ -0.8
SRRT-217ENST00000618411 HIGD2BQ4VC39 106 aa10.07□□□□□ -0.8
SRRT-217ENST00000618411 C6orf48Q9UBA6 75 aa10.07□□□□□ -0.8
SRRT-217ENST00000618411 LINC00528Q8N1L1 170 aa10.07□□□□□ -0.8
SRRT-217ENST00000618411 FN1P02751 2386 aaKnown RBP10.07□□□□□ -0.8
SRRT-217ENST00000618411 EPG5Q9HCE0 2579 aa10.07□□□□□ -0.8
SRRT-217ENST00000618411 X6R8D5 127 aa10.06□□□□□ -0.8
SRRT-217ENST00000618411 CHD8Q9HCK8 2581 aa10.06□□□□□ -0.8
SRRT-217ENST00000618411 DNAJC9-AS1A6NH13 148 aa10.05□□□□□ -0.8
SRRT-217ENST00000618411 POLQO75417 2590 aa10.05□□□□□ -0.8
SRRT-217ENST00000618411 hDV103S1A0JD37 113 aa10.05□□□□□ -0.8
SRRT-217ENST00000618411 FLNCQ14315 2725 aa10.05□□□□□ -0.8
SRRT-217ENST00000618411 LYRM9A8MSI8 78 aa10.04□□□□□ -0.8
SRRT-217ENST00000618411 VPREB1P12018 145 aa10.04□□□□□ -0.8
SRRT-217ENST00000618411 ESM1Q9NQ30 184 aa10.04□□□□□ -0.8
SRRT-217ENST00000618411 NIPBLQ6KC79 2804 aaeCLIP10.04□□□□□ -0.8
SRRT-217ENST00000618411 CUBNO60494 3623 aa10.04□□□□□ -0.8
SRRT-217ENST00000618411 M0R378 163 aa10.04□□□□□ -0.8
SRRT-217ENST00000618411 DAD1P61803 113 aa10.04□□□□□ -0.8
SRRT-217ENST00000618411 PRR34Q9NV39 138 aa10.04□□□□□ -0.8
SRRT-217ENST00000618411 PTPN13Q12923 2485 aa10.04□□□□□ -0.8
SRRT-217ENST00000618411 LCE6AA0A183 80 aa10.04□□□□□ -0.8
SRRT-217ENST00000618411 UTP20O75691 2785 aaKnown RBP10.03□□□□□ -0.8
SRRT-217ENST00000618411 PRR15Q8IV56 129 aa10.02□□□□□ -0.8
SRRT-217ENST00000618411 Q1T7F1 81 aa10.02□□□□□ -0.81
SRRT-217ENST00000618411 LRRK2Q5S007 2527 aa10.01□□□□□ -0.81
SRRT-217ENST00000618411 KLK12Q9UKR0 248 aa10.01□□□□□ -0.81
SRRT-217ENST00000618411 AKAP9Q99996 3911 aa10.01□□□□□ -0.81
SRRT-217ENST00000618411 PRB1P04280 392 aa10.01□□□□□ -0.81
SRRT-217ENST00000618411 C3orf84H3BNL1 204 aa10□□□□□ -0.81
SRRT-217ENST00000618411 APCP25054 2843 aa10□□□□□ -0.81
SRRT-217ENST00000618411 LELP1Q5T871 98 aa10□□□□□ -0.81
SRRT-217ENST00000618411 A0A1B0GW54 56 aa10□□□□□ -0.81
SRRT-217ENST00000618411 ZFYVE26Q68DK2 2539 aa9.99□□□□□ -0.81
SRRT-217ENST00000618411 SMIM29Q86T20 159 aa9.99□□□□□ -0.81
SRRT-217ENST00000618411 SPTBN4Q9H254 2564 aa9.99□□□□□ -0.81
SRRT-217ENST00000618411 FAM30AQ9NZY2 134 aa9.98□□□□□ -0.81
SRRT-217ENST00000618411 NAV2Q8IVL1 2488 aa9.98□□□□□ -0.81
SRRT-217ENST00000618411 CFAP46Q8IYW2 2715 aa9.98□□□□□ -0.81
SRRT-217ENST00000618411 NF1P21359 2839 aa9.98□□□□□ -0.81
SRRT-217ENST00000618411 IGLV5-48A0A075B6I7 105 aa9.97□□□□□ -0.81
SRRT-217ENST00000618411 EGFEM1PQ0D2K5 195 aa9.97□□□□□ -0.81
SRRT-217ENST00000618411 C1orf64Q8NEQ6 169 aa9.97□□□□□ -0.81
SRRT-217ENST00000618411 Q6ZRP5 223 aa9.96□□□□□ -0.81
SRRT-217ENST00000618411 Q6ZRU5 148 aa9.96□□□□□ -0.81
SRRT-217ENST00000618411 ZCCHC13Q8WW36 166 aaKnown RBP9.96□□□□□ -0.81
SRRT-217ENST00000618411 SETD2Q9BYW2 2564 aaPredicted RBP9.95□□□□□ -0.82
SRRT-217ENST00000618411 DEFB113Q30KQ7 82 aa9.95□□□□□ -0.82
SRRT-217ENST00000618411 CAMK2N2Q96S95 79 aa9.95□□□□□ -0.82
SRRT-217ENST00000618411 KPRPQ5T749 579 aaPredicted RBP9.95□□□□□ -0.82
SRRT-217ENST00000618411 ACACBO00763 2458 aa9.95□□□□□ -0.82
SRRT-217ENST00000618411 PMAIP1Q13794 54 aa9.94□□□□□ -0.82
SRRT-217ENST00000618411 NBEAL2Q6ZNJ1 2754 aa9.94□□□□□ -0.82
SRRT-217ENST00000618411 Q8N377 158 aa9.93□□□□□ -0.82
SRRT-217ENST00000618411 SONP18583 2426 aaKnown RBP9.93□□□□□ -0.82
SRRT-217ENST00000618411 GCN1Q92616 2671 aaKnown RBP9.93□□□□□ -0.82
SRRT-217ENST00000618411 LRCOL1A6NCL2 159 aa9.93□□□□□ -0.82
SRRT-217ENST00000618411 DEFB4AO15263 64 aa9.92□□□□□ -0.82
SRRT-217ENST00000618411 CENPEQ02224 2701 aa9.92□□□□□ -0.82
SRRT-217ENST00000618411 ETDCA0A1B0GVM5 59 aa9.92□□□□□ -0.82
SRRT-217ENST00000618411 KRTAP10-9P60411 292 aa9.91□□□□□ -0.82
SRRT-217ENST00000618411 CYP4F30PQ9H0H9 118 aa9.91□□□□□ -0.82
SRRT-217ENST00000618411 DEFB105AQ8NG35 78 aa9.9□□□□□ -0.82
SRRT-217ENST00000618411 MYO18BQ8IUG5 2567 aa9.9□□□□□ -0.83
SRRT-217ENST00000618411 A0A1W2PNM2 257 aa9.89□□□□□ -0.83
SRRT-217ENST00000618411 PKD1L2Q7Z442 2459 aa9.89□□□□□ -0.83
SRRT-217ENST00000618411 KCNQ1DNQ9H478 68 aa9.89□□□□□ -0.83
SRRT-217ENST00000618411 TRAV22A0A0B4J277 110 aa9.88□□□□□ -0.83
SRRT-217ENST00000618411 FAM208BQ5VWN6 2430 aa9.87□□□□□ -0.83
SRRT-217ENST00000618411 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms