RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 FAM218AQ96MZ4 157 aa8.43□□□□□ -1.06
CIITA-212ENST00000618207 EGFEM1PQ0D2K5 195 aa8.43□□□□□ -1.06
CIITA-212ENST00000618207 KIAA0087Q14695 138 aa8.43□□□□□ -1.06
CIITA-212ENST00000618207 C10orf25Q5T742 122 aa8.43□□□□□ -1.06
CIITA-212ENST00000618207 Q9HAA7 133 aa8.43□□□□□ -1.06
CIITA-212ENST00000618207 ENHOQ6UWT2 76 aa8.42□□□□□ -1.06
CIITA-212ENST00000618207 UNQ6190/PRO20217Q6UXQ8 127 aa8.42□□□□□ -1.06
CIITA-212ENST00000618207 TRAV13-2A0A0B4J235 113 aa8.42□□□□□ -1.06
CIITA-212ENST00000618207 SMIM11BQ8TCY0 68 aa8.42□□□□□ -1.06
CIITA-212ENST00000618207 CMYA5Q8N3K9 4069 aa8.41□□□□□ -1.06
CIITA-212ENST00000618207 CRYGAP11844 174 aa8.41□□□□□ -1.06
CIITA-212ENST00000618207 SPAG11BQ08648 103 aa8.41□□□□□ -1.06
CIITA-212ENST00000618207 DEFB131BA0A096LNP1 70 aa8.4□□□□□ -1.06
CIITA-212ENST00000618207 C11orf45Q8TAV5 145 aa8.4□□□□□ -1.06
CIITA-212ENST00000618207 OXTP01178 125 aa8.39□□□□□ -1.07
CIITA-212ENST00000618207 ESRGQ1W209 222 aa8.39□□□□□ -1.07
CIITA-212ENST00000618207 HIGD2BQ4VC39 106 aa8.39□□□□□ -1.07
CIITA-212ENST00000618207 TMEM258P61165 79 aa8.39□□□□□ -1.07
CIITA-212ENST00000618207 LINC00336Q6ZUF6 198 aa8.39□□□□□ -1.07
CIITA-212ENST00000618207 IMUPQ9GZP8 106 aa8.39□□□□□ -1.07
CIITA-212ENST00000618207 COX7CP15954 63 aa8.38□□□□□ -1.07
CIITA-212ENST00000618207 NCR3O14931 201 aa8.38□□□□□ -1.07
CIITA-212ENST00000618207 TRACP01848 142 aa8.38□□□□□ -1.07
CIITA-212ENST00000618207 A0A087WYN8 130 aa8.37□□□□□ -1.07
CIITA-212ENST00000618207 PRR34Q9NV39 138 aa8.37□□□□□ -1.07
CIITA-212ENST00000618207 H3BT86 120 aa8.36□□□□□ -1.07
CIITA-212ENST00000618207 RPL28P46779 137 aaKnown RBP8.36□□□□□ -1.07
CIITA-212ENST00000618207 C1orf195Q5TG92 126 aa8.36□□□□□ -1.07
CIITA-212ENST00000618207 Q8NDZ9 215 aa8.36□□□□□ -1.07
CIITA-212ENST00000618207 BAALC-AS2P0C853 105 aa8.35□□□□□ -1.07
CIITA-212ENST00000618207 FAM236DA0A1B0GTK5 79 aa8.35□□□□□ -1.07
CIITA-212ENST00000618207 SLPIP03973 132 aa8.35□□□□□ -1.07
CIITA-212ENST00000618207 FAM236CP0DP71 79 aa8.35□□□□□ -1.07
CIITA-212ENST00000618207 XAGE1AQ9HD64 81 aa8.35□□□□□ -1.07
CIITA-212ENST00000618207 STAB2Q8WWQ8 2551 aa8.35□□□□□ -1.07
CIITA-212ENST00000618207 LECT2O14960 151 aa8.34□□□□□ -1.07
CIITA-212ENST00000618207 CXCL5P42830 114 aa8.34□□□□□ -1.07
CIITA-212ENST00000618207 DNAL4O96015 105 aa8.34□□□□□ -1.07
CIITA-212ENST00000618207 IGKV2D-24A0A075B6R9 120 aa8.33□□□□□ -1.08
CIITA-212ENST00000618207 FAM240AA0A1B0GVK7 77 aa8.33□□□□□ -1.08
CIITA-212ENST00000618207 LINC01561Q8N1V8 128 aa8.33□□□□□ -1.08
CIITA-212ENST00000618207 DSCR8Q96T75 97 aa8.33□□□□□ -1.08
CIITA-212ENST00000618207 hADV29S1A0JD25 119 aa8.32□□□□□ -1.08
CIITA-212ENST00000618207 K7EIL1 84 aa8.32□□□□□ -1.08
CIITA-212ENST00000618207 ZNF561-AS1K7EIQ3 104 aa8.32□□□□□ -1.08
CIITA-212ENST00000618207 C2orf48Q96LS8 159 aa8.31□□□□□ -1.08
CIITA-212ENST00000618207 LINC01600Q96MT4 127 aa8.31□□□□□ -1.08
CIITA-212ENST00000618207 S100A7L2Q5SY68 101 aa8.31□□□□□ -1.08
CIITA-212ENST00000618207 RPL18AQ02543 176 aaKnown RBP8.3□□□□□ -1.08
CIITA-212ENST00000618207 CAMK2N2Q96S95 79 aa8.3□□□□□ -1.08
CIITA-212ENST00000618207 C6orf48Q9UBA6 75 aa8.3□□□□□ -1.08
CIITA-212ENST00000618207 COX17Q14061 63 aa8.3□□□□□ -1.08
CIITA-212ENST00000618207 H3BNG1 76 aa8.3□□□□□ -1.08
CIITA-212ENST00000618207 COL7A1Q02388 2944 aa8.29□□□□□ -1.08
CIITA-212ENST00000618207 C9orf129Q5T035 196 aaKnown RBP8.29□□□□□ -1.08
CIITA-212ENST00000618207 C6orf99Q4VX62 202 aa8.28□□□□□ -1.08
CIITA-212ENST00000618207 C22orf24Q9Y442 160 aa8.28□□□□□ -1.08
CIITA-212ENST00000618207 TENM2Q9NT68 2774 aa8.27□□□□□ -1.08
CIITA-212ENST00000618207 CYSTM1Q9H1C7 97 aa8.27□□□□□ -1.09
CIITA-212ENST00000618207 H0YGX0 51 aa8.27□□□□□ -1.09
CIITA-212ENST00000618207 Q6ZRU5 148 aa8.27□□□□□ -1.09
CIITA-212ENST00000618207 KRTAP26-1Q6PEX3 210 aa8.26□□□□□ -1.09
CIITA-212ENST00000618207 C15orf56Q8N910 161 aa8.25□□□□□ -1.09
CIITA-212ENST00000618207 MDFIQ99750 246 aa8.25□□□□□ -1.09
CIITA-212ENST00000618207 LINC00588Q9Y4M8 146 aa8.25□□□□□ -1.09
CIITA-212ENST00000618207 DNAH3Q8TD57 4116 aa8.25□□□□□ -1.09
CIITA-212ENST00000618207 TRAV10A0A0B4J240 114 aa8.25□□□□□ -1.09
CIITA-212ENST00000618207 ATOX1O00244 68 aa8.25□□□□□ -1.09
CIITA-212ENST00000618207 NDUFC2O95298 119 aa8.25□□□□□ -1.09
CIITA-212ENST00000618207 C14orf132Q9NPU4 83 aa8.25□□□□□ -1.09
CIITA-212ENST00000618207 LINC01556Q5JQF7 62 aa8.24□□□□□ -1.09
CIITA-212ENST00000618207 TM2D3Q9BRN9 247 aa8.24□□□□□ -1.09
CIITA-212ENST00000618207 CASC10Q5T4H9 136 aa8.22□□□□□ -1.09
CIITA-212ENST00000618207 FAM19A1Q7Z5A9 133 aa8.22□□□□□ -1.09
CIITA-212ENST00000618207 TRBV10-3A0A0K0K1G6 114 aa8.22□□□□□ -1.09
CIITA-212ENST00000618207 ACYP1P07311 99 aa8.22□□□□□ -1.09
CIITA-212ENST00000618207 LYSTQ99698 3801 aa8.22□□□□□ -1.09
CIITA-212ENST00000618207 LINC00643Q86TS7 51 aa8.21□□□□□ -1.09
CIITA-212ENST00000618207 A0A0U1RQV1 116 aa8.21□□□□□ -1.1
CIITA-212ENST00000618207 ORMDL1Q9P0S3 153 aa8.21□□□□□ -1.1
CIITA-212ENST00000618207 HUWE1Q7Z6Z7 4374 aaKnown RBP8.2□□□□□ -1.1
CIITA-212ENST00000618207 Q8N814 137 aa8.2□□□□□ -1.1
CIITA-212ENST00000618207 UPK3BQ9BT76 320 aa8.2□□□□□ -1.1
CIITA-212ENST00000618207 HIST1H4AP62805 103 aaKnown RBP8.2□□□□□ -1.1
CIITA-212ENST00000618207 Q6ZRP5 223 aa8.19□□□□□ -1.1
CIITA-212ENST00000618207 GVQW2A0A096LPI5 108 aaPredicted RBP8.18□□□□□ -1.1
CIITA-212ENST00000618207 DNAH10OSP0CZ25 163 aa8.18□□□□□ -1.1
CIITA-212ENST00000618207 SYCNQ0VAF6 134 aa8.18□□□□□ -1.1
CIITA-212ENST00000618207 EPM2AB3EWF7 344 aa8.17□□□□□ -1.1
CIITA-212ENST00000618207 SMCR5Q8TEV8 140 aa8.17□□□□□ -1.1
CIITA-212ENST00000618207 INAFM2P0DMQ5 153 aa8.17□□□□□ -1.1
CIITA-212ENST00000618207 NDUFC2-KCTD14E9PQ53 114 aa8.16□□□□□ -1.1
CIITA-212ENST00000618207 SERP2Q8N6R1 65 aa8.16□□□□□ -1.1
CIITA-212ENST00000618207 IGLV6-57P01721 117 aa8.16□□□□□ -1.1
CIITA-212ENST00000618207 TRAV23DV6A0A075B6W5 121 aa8.16□□□□□ -1.1
CIITA-212ENST00000618207 BRK1Q8WUW1 75 aa8.16□□□□□ -1.1
CIITA-212ENST00000618207 USP17L23D6RBM5 183 aa8.15□□□□□ -1.1
CIITA-212ENST00000618207 LINC00575Q6W349 94 aa8.15□□□□□ -1.1
CIITA-212ENST00000618207 VPREB1P12018 145 aa8.15□□□□□ -1.11
CIITA-212ENST00000618207 CSMD3Q7Z407 3707 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms