RNA–Protein interactions for RNA: ENST00000617962.1

GADD45A-205, Transcript of growth arrest and DNA damage inducible alpha, humanhuman

TSL 1 (best) BASIC

Gene GADD45A, Length 1,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GADD45A-205ENST00000617962 SPAG11AQ6PDA7 123 aa13.98□□□□□ -0.17
GADD45A-205ENST00000617962 FA2HQ7L5A8 372 aa13.97□□□□□ -0.17
GADD45A-205ENST00000617962 ZNF625Q96I27 306 aaPredicted RBP13.97□□□□□ -0.17
GADD45A-205ENST00000617962 APOC3P02656 99 aa13.96□□□□□ -0.17
GADD45A-205ENST00000617962 COX17Q14061 63 aa13.96□□□□□ -0.17
GADD45A-205ENST00000617962 COX19Q49B96 90 aa13.96□□□□□ -0.17
GADD45A-205ENST00000617962 ZNF22P17026 224 aaPredicted RBP13.95□□□□□ -0.18
GADD45A-205ENST00000617962 FABP9Q0Z7S8 132 aa13.95□□□□□ -0.18
GADD45A-205ENST00000617962 SMCO4Q9NRQ5 59 aa13.95□□□□□ -0.18
GADD45A-205ENST00000617962 NDUFA6P56556 154 aa13.94□□□□□ -0.18
GADD45A-205ENST00000617962 NDUFA5Q16718 116 aa13.94□□□□□ -0.18
GADD45A-205ENST00000617962 FP248Q71RG6 208 aaPredicted RBP13.94□□□□□ -0.18
GADD45A-205ENST00000617962 SPRR4Q96PI1 79 aa13.94□□□□□ -0.18
GADD45A-205ENST00000617962 SVBPQ8N300 66 aa13.92□□□□□ -0.18
GADD45A-205ENST00000617962 LINC00337Q8N6G1 96 aa13.92□□□□□ -0.18
GADD45A-205ENST00000617962 C4orf48Q5BLP8 95 aa13.91□□□□□ -0.18
GADD45A-205ENST00000617962 SNAPINO95295 136 aa13.9□□□□□ -0.18
GADD45A-205ENST00000617962 KRTAP13-3Q3SY46 172 aa13.89□□□□□ -0.19
GADD45A-205ENST00000617962 DAND5Q8N907 189 aa13.88□□□□□ -0.19
GADD45A-205ENST00000617962 Q8NBF4 154 aa13.87□□□□□ -0.19
GADD45A-205ENST00000617962 ZNF706Q9Y5V0 76 aaPredicted RBP13.87□□□□□ -0.19
GADD45A-205ENST00000617962 A0A096LNJ9 63 aa13.86□□□□□ -0.19
GADD45A-205ENST00000617962 ASB16-AS1Q495Z4 193 aa13.86□□□□□ -0.19
GADD45A-205ENST00000617962 SFTA2Q6UW10 78 aa13.85□□□□□ -0.19
GADD45A-205ENST00000617962 TRAPPC1Q9Y5R8 145 aa13.85□□□□□ -0.19
GADD45A-205ENST00000617962 C11orf86A6NJI1 115 aa13.84□□□□□ -0.19
GADD45A-205ENST00000617962 LINC01547P58512 204 aaPredicted RBP13.84□□□□□ -0.19
GADD45A-205ENST00000617962 LINC00158P58513 81 aa13.84□□□□□ -0.19
GADD45A-205ENST00000617962 TMEM170BQ5T4T1 132 aa13.83□□□□□ -0.2
GADD45A-205ENST00000617962 SLC7A5P1Q8MH63 180 aa13.83□□□□□ -0.2
GADD45A-205ENST00000617962 KRTAP4-1Q9BYQ7 146 aa13.82□□□□□ -0.2
GADD45A-205ENST00000617962 A0A0U1RRA0 63 aa13.81□□□□□ -0.2
GADD45A-205ENST00000617962 BAGE3Q86Y29 109 aa13.8□□□□□ -0.2
GADD45A-205ENST00000617962 C18orf32Q8TCD1 76 aa13.8□□□□□ -0.2
GADD45A-205ENST00000617962 URB1-AS1Q96HZ7 61 aa13.8□□□□□ -0.2
GADD45A-205ENST00000617962 HBDP02042 147 aa13.79□□□□□ -0.2
GADD45A-205ENST00000617962 PMCHL1Q16048 86 aa13.79□□□□□ -0.2
GADD45A-205ENST00000617962 PRYO14603 147 aa13.78□□□□□ -0.2
GADD45A-205ENST00000617962 SPINK1P00995 79 aa13.78□□□□□ -0.2
GADD45A-205ENST00000617962 LINC00614P0C842 121 aa13.78□□□□□ -0.2
GADD45A-205ENST00000617962 SMCR5Q8TEV8 140 aa13.78□□□□□ -0.2
GADD45A-205ENST00000617962 SEC61BP60468 96 aaKnown RBP13.77□□□□□ -0.21
GADD45A-205ENST00000617962 YPEL4Q96NS1 127 aa13.76□□□□□ -0.21
GADD45A-205ENST00000617962 NCR3O14931 201 aa13.74□□□□□ -0.21
GADD45A-205ENST00000617962 SPRR1AP35321 89 aa13.74□□□□□ -0.21
GADD45A-205ENST00000617962 BOD1L2Q8IYS8 172 aa13.74□□□□□ -0.21
GADD45A-205ENST00000617962 KCNQ1DNQ9H478 68 aa13.73□□□□□ -0.21
GADD45A-205ENST00000617962 ETDCA0A1B0GVM5 59 aa13.72□□□□□ -0.21
GADD45A-205ENST00000617962 ATP6V1G1O75348 118 aa13.72□□□□□ -0.21
GADD45A-205ENST00000617962 SMIM13P0DJ93 91 aa13.72□□□□□ -0.21
GADD45A-205ENST00000617962 KRTAP4-16G5E9R7 235 aaPredicted RBP13.71□□□□□ -0.21
GADD45A-205ENST00000617962 LINC00483Q53H64 154 aa13.71□□□□□ -0.21
GADD45A-205ENST00000617962 CHTOPQ9Y3Y2 248 aaKnown RBP13.71□□□□□ -0.21
GADD45A-205ENST00000617962 TMEM223A0PJW6 202 aa13.7□□□□□ -0.22
GADD45A-205ENST00000617962 NDUFA12Q9UI09 145 aa13.7□□□□□ -0.22
GADD45A-205ENST00000617962 GAGE2AQ6NT46 116 aa13.69□□□□□ -0.22
GADD45A-205ENST00000617962 MOBPQ13875 183 aa13.68□□□□□ -0.22
GADD45A-205ENST00000617962 MIR7-3HGQ8N6C7 128 aa13.68□□□□□ -0.22
GADD45A-205ENST00000617962 IGLV9-49A0A0B4J1Y8 123 aa13.67□□□□□ -0.22
GADD45A-205ENST00000617962 TRBV10-3A0A0K0K1G6 114 aa13.67□□□□□ -0.22
GADD45A-205ENST00000617962 MEIG1Q5JSS6 88 aa13.67□□□□□ -0.22
GADD45A-205ENST00000617962 Q8N377 158 aa13.67□□□□□ -0.22
GADD45A-205ENST00000617962 FSIP2Q5CZC0 6907 aa13.65□□□□□ -0.22
GADD45A-205ENST00000617962 FAM19A2Q8N3H0 131 aa13.65□□□□□ -0.22
GADD45A-205ENST00000617962 RPS29P62273 56 aaKnown RBP13.64□□□□□ -0.23
GADD45A-205ENST00000617962 ERC2-IT1O76042 136 aa13.63□□□□□ -0.23
GADD45A-205ENST00000617962 SSBP3-AS1Q7Z2R9 100 aa13.63□□□□□ -0.23
GADD45A-205ENST00000617962 B5MCH6 92 aa13.62□□□□□ -0.23
GADD45A-205ENST00000617962 SLC25A20O43772 301 aa13.61□□□□□ -0.23
GADD45A-205ENST00000617962 CRCT1Q9UGL9 99 aa13.61□□□□□ -0.23
GADD45A-205ENST00000617962 TRAV12-1A0A0B4J245 112 aa13.6□□□□□ -0.23
GADD45A-205ENST00000617962 HERV-K104P63124 156 aa13.6□□□□□ -0.23
GADD45A-205ENST00000617962 S100A12P80511 92 aa13.6□□□□□ -0.23
GADD45A-205ENST00000617962 XP32Q5T750 250 aa13.6□□□□□ -0.23
GADD45A-205ENST00000617962 CHCHD1Q96BP2 118 aaKnown RBP13.6□□□□□ -0.23
GADD45A-205ENST00000617962 IFI27L1Q96BM0 104 aa13.57□□□□□ -0.24
GADD45A-205ENST00000617962 Q9BRP9 147 aa13.57□□□□□ -0.24
GADD45A-205ENST00000617962 LINC00587B1AMM8 73 aa13.56□□□□□ -0.24
GADD45A-205ENST00000617962 LCE2CQ5TA81 110 aa13.55□□□□□ -0.24
GADD45A-205ENST00000617962 MAP1LC3CQ9BXW4 147 aa13.55□□□□□ -0.24
GADD45A-205ENST00000617962 TRGC2P03986 189 aa13.54□□□□□ -0.24
GADD45A-205ENST00000617962 DDTP30046 118 aa13.54□□□□□ -0.24
GADD45A-205ENST00000617962 MYMXA0A1B0GTQ4 84 aa13.53□□□□□ -0.24
GADD45A-205ENST00000617962 COLCA2A8K830 154 aa13.53□□□□□ -0.24
GADD45A-205ENST00000617962 HSBP1O75506 76 aa13.53□□□□□ -0.24
GADD45A-205ENST00000617962 Q6ZRX8 168 aa13.53□□□□□ -0.24
GADD45A-205ENST00000617962 C9orf153Q5TBE3 101 aa13.5□□□□□ -0.25
GADD45A-205ENST00000617962 LOC107984156A0A0G2JMH3 177 aa13.49□□□□□ -0.25
GADD45A-205ENST00000617962 TRBV10-2A0A0K0K1G8 114 aa13.49□□□□□ -0.25
GADD45A-205ENST00000617962 ARL17AQ8IVW1 177 aa13.49□□□□□ -0.25
GADD45A-205ENST00000617962 H0Y8G0 127 aa13.47□□□□□ -0.25
GADD45A-205ENST00000617962 TSPEAR-AS2P59090 65 aa13.47□□□□□ -0.25
GADD45A-205ENST00000617962 KRTAP19-2Q3LHN2 52 aa13.45□□□□□ -0.26
GADD45A-205ENST00000617962 SPANXB1Q9NS25 103 aaPredicted RBP13.45□□□□□ -0.26
GADD45A-205ENST00000617962 SERF1AO75920 110 aa13.43□□□□□ -0.26
GADD45A-205ENST00000617962 LEPROTL1O95214 131 aa13.43□□□□□ -0.26
GADD45A-205ENST00000617962 S100A7L2Q5SY68 101 aa13.43□□□□□ -0.26
GADD45A-205ENST00000617962 LEPROTO15243 131 aa13.42□□□□□ -0.26
GADD45A-205ENST00000617962 IGLV6-57P01721 117 aa13.42□□□□□ -0.26
GADD45A-205ENST00000617962 JOSD1Q15040 202 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms