RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 C15orf56Q8N910 161 aa13.54□□□□□ -0.24
SDHA-220ENST00000617470 C1orf43Q9BWL3 253 aa13.54□□□□□ -0.24
SDHA-220ENST00000617470 TRBV20-1A0A075B6N2 111 aa13.53□□□□□ -0.24
SDHA-220ENST00000617470 WFDC2Q14508 124 aa13.53□□□□□ -0.24
SDHA-220ENST00000617470 DNAH6Q9C0G6 4158 aa13.52□□□□□ -0.25
SDHA-220ENST00000617470 HIGD2BQ4VC39 106 aa13.51□□□□□ -0.25
SDHA-220ENST00000617470 C1orf134Q5TEV5 83 aa13.51□□□□□ -0.25
SDHA-220ENST00000617470 RMI2Q96E14 147 aa13.51□□□□□ -0.25
SDHA-220ENST00000617470 VPS25Q9BRG1 176 aa13.5□□□□□ -0.25
SDHA-220ENST00000617470 GVQW2A0A096LPI5 108 aaPredicted RBP13.49□□□□□ -0.25
SDHA-220ENST00000617470 SMCPP49901 116 aaPredicted RBP13.49□□□□□ -0.25
SDHA-220ENST00000617470 C6orf48Q9UBA6 75 aa13.49□□□□□ -0.25
SDHA-220ENST00000617470 PSCAO43653 123 aa13.49□□□□□ -0.25
SDHA-220ENST00000617470 TRAV13-2A0A0B4J235 113 aa13.48□□□□□ -0.25
SDHA-220ENST00000617470 Q8NDZ9 215 aa13.46□□□□□ -0.25
SDHA-220ENST00000617470 ZNF561-AS1K7EIQ3 104 aa13.45□□□□□ -0.26
SDHA-220ENST00000617470 CLEC2BQ92478 149 aa13.45□□□□□ -0.26
SDHA-220ENST00000617470 RYR2Q92736 4967 aa13.44□□□□□ -0.26
SDHA-220ENST00000617470 COX6CP09669 75 aa13.44□□□□□ -0.26
SDHA-220ENST00000617470 PRR3P79522 188 aaKnown RBP13.44□□□□□ -0.26
SDHA-220ENST00000617470 ETDBQ3ZM63 59 aa13.44□□□□□ -0.26
SDHA-220ENST00000617470 ATXN8Q156A1 80 aa13.43□□□□□ -0.26
SDHA-220ENST00000617470 Q6ZRN7 208 aaPredicted RBP13.43□□□□□ -0.26
SDHA-220ENST00000617470 CAMK2N2Q96S95 79 aa13.43□□□□□ -0.26
SDHA-220ENST00000617470 C2orf48Q96LS8 159 aa13.43□□□□□ -0.26
SDHA-220ENST00000617470 Q6ZRU5 148 aa13.42□□□□□ -0.26
SDHA-220ENST00000617470 NDUFC2O95298 119 aa13.41□□□□□ -0.26
SDHA-220ENST00000617470 DNAH2Q9P225 4427 aa13.41□□□□□ -0.26
SDHA-220ENST00000617470 DNAH10Q8IVF4 4471 aa13.41□□□□□ -0.26
SDHA-220ENST00000617470 RPL28P46779 137 aaKnown RBP13.41□□□□□ -0.26
SDHA-220ENST00000617470 LST1O00453 97 aa13.4□□□□□ -0.26
SDHA-220ENST00000617470 LINC01620Q4KN68 170 aa13.4□□□□□ -0.26
SDHA-220ENST00000617470 SMIM11BQ8TCY0 68 aa13.4□□□□□ -0.26
SDHA-220ENST00000617470 C9JAW5 83 aa13.4□□□□□ -0.27
SDHA-220ENST00000617470 LECT2O14960 151 aa13.4□□□□□ -0.27
SDHA-220ENST00000617470 RTL8CO15255 209 aa13.4□□□□□ -0.27
SDHA-220ENST00000617470 OR13C6PQ8NH95 151 aa13.36□□□□□ -0.27
SDHA-220ENST00000617470 SLC25A20O43772 301 aa13.36□□□□□ -0.27
SDHA-220ENST00000617470 USP17L23D6RBM5 183 aa13.35□□□□□ -0.27
SDHA-220ENST00000617470 F8WDY8 70 aa13.35□□□□□ -0.27
SDHA-220ENST00000617470 PCP4P48539 62 aa13.35□□□□□ -0.27
SDHA-220ENST00000617470 FAM218AQ96MZ4 157 aa13.35□□□□□ -0.27
SDHA-220ENST00000617470 XAGE1AQ9HD64 81 aa13.35□□□□□ -0.27
SDHA-220ENST00000617470 J3QR89 54 aa13.34□□□□□ -0.27
SDHA-220ENST00000617470 SLPIP03973 132 aa13.34□□□□□ -0.27
SDHA-220ENST00000617470 NCR3O14931 201 aa13.34□□□□□ -0.27
SDHA-220ENST00000617470 TNP2Q05952 138 aa13.34□□□□□ -0.27
SDHA-220ENST00000617470 SYCNQ0VAF6 134 aa13.34□□□□□ -0.27
SDHA-220ENST00000617470 LINC01600Q96MT4 127 aa13.33□□□□□ -0.28
SDHA-220ENST00000617470 RYR3Q15413 4870 aa13.33□□□□□ -0.28
SDHA-220ENST00000617470 TRBV10-2A0A0K0K1G8 114 aa13.32□□□□□ -0.28
SDHA-220ENST00000617470 M0QXV9 152 aa13.32□□□□□ -0.28
SDHA-220ENST00000617470 FRAS1Q86XX4 4008 aa13.31□□□□□ -0.28
SDHA-220ENST00000617470 LRCOL1A6NCL2 159 aa13.31□□□□□ -0.28
SDHA-220ENST00000617470 NDUFC2-KCTD14E9PQ53 114 aa13.31□□□□□ -0.28
SDHA-220ENST00000617470 ANKRD29Q8N6D5 301 aa13.31□□□□□ -0.28
SDHA-220ENST00000617470 A0A087WTM6 91 aa13.3□□□□□ -0.28
SDHA-220ENST00000617470 TEN1Q86WV5 123 aa13.3□□□□□ -0.28
SDHA-220ENST00000617470 Q6ZRP5 223 aa13.29□□□□□ -0.28
SDHA-220ENST00000617470 TMEM126AQ9H061 195 aa13.29□□□□□ -0.28
SDHA-220ENST00000617470 LINC00336Q6ZUF6 198 aa13.27□□□□□ -0.28
SDHA-220ENST00000617470 CARD19Q96LW7 228 aa13.27□□□□□ -0.28
SDHA-220ENST00000617470 DNAH17Q9UFH2 4485 aa13.27□□□□□ -0.28
SDHA-220ENST00000617470 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.26□□□□□ -0.29
SDHA-220ENST00000617470 TRACP01848 142 aa13.26□□□□□ -0.29
SDHA-220ENST00000617470 RPL18AQ02543 176 aaKnown RBP13.26□□□□□ -0.29
SDHA-220ENST00000617470 C14orf177Q52M58 125 aa13.26□□□□□ -0.29
SDHA-220ENST00000617470 PPDPFLQ8WWR9 84 aa13.26□□□□□ -0.29
SDHA-220ENST00000617470 GAGE2EQ4V326 116 aa13.25□□□□□ -0.29
SDHA-220ENST00000617470 GAGE2DQ9UEU5 116 aa13.25□□□□□ -0.29
SDHA-220ENST00000617470 A0A087WYN8 130 aa13.25□□□□□ -0.29
SDHA-220ENST00000617470 IGLV6-57P01721 117 aa13.25□□□□□ -0.29
SDHA-220ENST00000617470 VPREB1P12018 145 aa13.25□□□□□ -0.29
SDHA-220ENST00000617470 Q8N814 137 aa13.25□□□□□ -0.29
SDHA-220ENST00000617470 H0YGX0 51 aa13.24□□□□□ -0.29
SDHA-220ENST00000617470 H3BT86 120 aa13.24□□□□□ -0.29
SDHA-220ENST00000617470 C21orf62-AS1Q17RA5 79 aa13.24□□□□□ -0.29
SDHA-220ENST00000617470 C9orf129Q5T035 196 aaKnown RBP13.23□□□□□ -0.29
SDHA-220ENST00000617470 S100A7L2Q5SY68 101 aa13.23□□□□□ -0.29
SDHA-220ENST00000617470 TLX1NBP0CAT3 122 aa13.22□□□□□ -0.29
SDHA-220ENST00000617470 FAT2Q9NYQ8 4349 aa13.21□□□□□ -0.3
SDHA-220ENST00000617470 FUSP35637 526 aaKnown RBP eCLIP13.2□□□□□ -0.3
SDHA-220ENST00000617470 TRBV10-3A0A0K0K1G6 114 aa13.2□□□□□ -0.3
SDHA-220ENST00000617470 C6orf99Q4VX62 202 aa13.19□□□□□ -0.3
SDHA-220ENST00000617470 C22orf24Q9Y442 160 aa13.18□□□□□ -0.3
SDHA-220ENST00000617470 TEX49A0A1B0GTD5 131 aa13.16□□□□□ -0.3
SDHA-220ENST00000617470 SIGMAR1Q99720 223 aa13.16□□□□□ -0.3
SDHA-220ENST00000617470 M0R378 163 aa13.15□□□□□ -0.3
SDHA-220ENST00000617470 BAALC-AS2P0C853 105 aa13.15□□□□□ -0.3
SDHA-220ENST00000617470 KRTAP10-2P60368 255 aa13.15□□□□□ -0.3
SDHA-220ENST00000617470 SERTAD4-AS1Q5TG53 156 aa13.14□□□□□ -0.31
SDHA-220ENST00000617470 IGLV5-52A0A0A0MRZ9 124 aa13.14□□□□□ -0.31
SDHA-220ENST00000617470 CDIP1Q9H305 208 aa13.14□□□□□ -0.31
SDHA-220ENST00000617470 TRAV23DV6A0A075B6W5 121 aa13.12□□□□□ -0.31
SDHA-220ENST00000617470 CNBPP62633 177 aaKnown RBP13.12□□□□□ -0.31
SDHA-220ENST00000617470 LINC00167Q96N53 147 aa13.11□□□□□ -0.31
SDHA-220ENST00000617470 PLA2G2DQ9UNK4 145 aa13.11□□□□□ -0.31
SDHA-220ENST00000617470 A0A1B0GVY2 172 aa13.11□□□□□ -0.31
SDHA-220ENST00000617470 DNAL4O96015 105 aa13.11□□□□□ -0.31
SDHA-220ENST00000617470 KRTAP7-1Q8IUC3 87 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms