RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 MIR7-3HGQ8N6C7 128 aa13.79□□□□□ -0.2
CNTNAP3B-212ENST00000617422 LINC00526Q96FQ7 95 aa13.79□□□□□ -0.2
CNTNAP3B-212ENST00000617422 INAFM2P0DMQ5 153 aa13.78□□□□□ -0.2
CNTNAP3B-212ENST00000617422 KRTAP21-3Q3LHN1 58 aa13.78□□□□□ -0.2
CNTNAP3B-212ENST00000617422 C6orf223Q8N319 242 aa13.78□□□□□ -0.2
CNTNAP3B-212ENST00000617422 SND1-IT1Q9HBX3 110 aa13.78□□□□□ -0.2
CNTNAP3B-212ENST00000617422 CCL18P55774 89 aa13.78□□□□□ -0.2
CNTNAP3B-212ENST00000617422 LINC00643Q86TS7 51 aa13.77□□□□□ -0.21
CNTNAP3B-212ENST00000617422 FAM218AQ96MZ4 157 aa13.77□□□□□ -0.21
CNTNAP3B-212ENST00000617422 KLK5Q9Y337 293 aaPredicted RBP13.77□□□□□ -0.21
CNTNAP3B-212ENST00000617422 IBA57-AS1B1ANH7 110 aa13.76□□□□□ -0.21
CNTNAP3B-212ENST00000617422 PFN2P35080 140 aa13.76□□□□□ -0.21
CNTNAP3B-212ENST00000617422 CCDC179H3BU77 68 aa13.76□□□□□ -0.21
CNTNAP3B-212ENST00000617422 STARD9Q9P2P6 4700 aa13.76□□□□□ -0.21
CNTNAP3B-212ENST00000617422 LINC00158P58513 81 aa13.75□□□□□ -0.21
CNTNAP3B-212ENST00000617422 LINC00337Q8N6G1 96 aa13.75□□□□□ -0.21
CNTNAP3B-212ENST00000617422 C10orf25Q5T742 122 aa13.75□□□□□ -0.21
CNTNAP3B-212ENST00000617422 SS18L2Q9UHA2 77 aa13.75□□□□□ -0.21
CNTNAP3B-212ENST00000617422 IGKV2-28A0A075B6P5 120 aa13.74□□□□□ -0.21
CNTNAP3B-212ENST00000617422 IGKV2D-28P01615 120 aa13.74□□□□□ -0.21
CNTNAP3B-212ENST00000617422 SPAG11BQ08648 103 aa13.74□□□□□ -0.21
CNTNAP3B-212ENST00000617422 C9orf116Q5BN46 136 aaPredicted RBP13.73□□□□□ -0.21
CNTNAP3B-212ENST00000617422 CFAP161Q6P656 301 aa13.73□□□□□ -0.21
CNTNAP3B-212ENST00000617422 SDIM1Q6ZPB5 146 aa13.73□□□□□ -0.21
CNTNAP3B-212ENST00000617422 APLNQ9ULZ1 77 aa13.73□□□□□ -0.21
CNTNAP3B-212ENST00000617422 C22orf24Q9Y442 160 aa13.73□□□□□ -0.21
CNTNAP3B-212ENST00000617422 H0YGX0 51 aa13.73□□□□□ -0.21
CNTNAP3B-212ENST00000617422 Q9HAA7 133 aa13.73□□□□□ -0.21
CNTNAP3B-212ENST00000617422 UPK3BQ9BT76 320 aa13.72□□□□□ -0.21
CNTNAP3B-212ENST00000617422 UNQ6190/PRO20217Q6UXQ8 127 aa13.72□□□□□ -0.21
CNTNAP3B-212ENST00000617422 FBN3Q75N90 2809 aa13.72□□□□□ -0.21
CNTNAP3B-212ENST00000617422 IGKV2D-24A0A075B6R9 120 aa13.71□□□□□ -0.21
CNTNAP3B-212ENST00000617422 DNAL4O96015 105 aa13.71□□□□□ -0.21
CNTNAP3B-212ENST00000617422 C1orf43Q9BWL3 253 aa13.71□□□□□ -0.22
CNTNAP3B-212ENST00000617422 C15orf56Q8N910 161 aa13.7□□□□□ -0.22
CNTNAP3B-212ENST00000617422 SMIM11BQ8TCY0 68 aa13.7□□□□□ -0.22
CNTNAP3B-212ENST00000617422 CXCL5P42830 114 aa13.69□□□□□ -0.22
CNTNAP3B-212ENST00000617422 SMCR5Q8TEV8 140 aa13.69□□□□□ -0.22
CNTNAP3B-212ENST00000617422 DNAH10Q8IVF4 4471 aa13.68□□□□□ -0.22
CNTNAP3B-212ENST00000617422 HIGD2BQ4VC39 106 aa13.68□□□□□ -0.22
CNTNAP3B-212ENST00000617422 CASC10Q5T4H9 136 aa13.66□□□□□ -0.22
CNTNAP3B-212ENST00000617422 KRTAP1-5Q9BYS1 174 aa13.66□□□□□ -0.22
CNTNAP3B-212ENST00000617422 FAM236AA0A1B0GUQ0 79 aa13.65□□□□□ -0.22
CNTNAP3B-212ENST00000617422 FAM236BA0A1B0GV22 79 aa13.65□□□□□ -0.22
CNTNAP3B-212ENST00000617422 GAGE2AQ6NT46 116 aa13.65□□□□□ -0.22
CNTNAP3B-212ENST00000617422 A0A087WYN8 130 aa13.64□□□□□ -0.23
CNTNAP3B-212ENST00000617422 C6orf48Q9UBA6 75 aa13.63□□□□□ -0.23
CNTNAP3B-212ENST00000617422 OBSCN-AS1Q96MR7 158 aa13.62□□□□□ -0.23
CNTNAP3B-212ENST00000617422 COX17Q14061 63 aa13.61□□□□□ -0.23
CNTNAP3B-212ENST00000617422 NUPR2A6NF83 97 aa13.6□□□□□ -0.23
CNTNAP3B-212ENST00000617422 ZNF561-AS1K7EIQ3 104 aa13.6□□□□□ -0.23
CNTNAP3B-212ENST00000617422 OR13C6PQ8NH95 151 aa13.59□□□□□ -0.23
CNTNAP3B-212ENST00000617422 VPS13DQ5THJ4 4388 aa13.59□□□□□ -0.23
CNTNAP3B-212ENST00000617422 Q8NDZ9 215 aa13.59□□□□□ -0.23
CNTNAP3B-212ENST00000617422 SVIPQ8NHG7 77 aa13.59□□□□□ -0.23
CNTNAP3B-212ENST00000617422 TGP01266 2768 aa13.59□□□□□ -0.23
CNTNAP3B-212ENST00000617422 GVQW2A0A096LPI5 108 aaPredicted RBP13.58□□□□□ -0.24
CNTNAP3B-212ENST00000617422 LECT2O14960 151 aa13.58□□□□□ -0.24
CNTNAP3B-212ENST00000617422 UBE2DNLQ8IWF7 75 aa13.58□□□□□ -0.24
CNTNAP3B-212ENST00000617422 Q6ZRU5 148 aa13.58□□□□□ -0.24
CNTNAP3B-212ENST00000617422 CAMK2N2Q96S95 79 aa13.57□□□□□ -0.24
CNTNAP3B-212ENST00000617422 TMEM126AQ9H061 195 aa13.57□□□□□ -0.24
CNTNAP3B-212ENST00000617422 PRR3P79522 188 aaKnown RBP13.56□□□□□ -0.24
CNTNAP3B-212ENST00000617422 A0A1B0GX51 115 aa13.55□□□□□ -0.24
CNTNAP3B-212ENST00000617422 C14orf132Q9NPU4 83 aa13.55□□□□□ -0.24
CNTNAP3B-212ENST00000617422 ORMDL1Q9P0S3 153 aa13.54□□□□□ -0.24
CNTNAP3B-212ENST00000617422 C2orf48Q96LS8 159 aa13.54□□□□□ -0.24
CNTNAP3B-212ENST00000617422 USP17L23D6RBM5 183 aa13.53□□□□□ -0.24
CNTNAP3B-212ENST00000617422 C3orf22Q8N5N4 141 aa13.53□□□□□ -0.24
CNTNAP3B-212ENST00000617422 SLPIP03973 132 aa13.52□□□□□ -0.24
CNTNAP3B-212ENST00000617422 UQCRQO14949 82 aa13.52□□□□□ -0.25
CNTNAP3B-212ENST00000617422 NDUFC2O95298 119 aa13.52□□□□□ -0.25
CNTNAP3B-212ENST00000617422 C9orf129Q5T035 196 aaKnown RBP13.51□□□□□ -0.25
CNTNAP3B-212ENST00000617422 Q6JHZ5 121 aa13.51□□□□□ -0.25
CNTNAP3B-212ENST00000617422 LINC00167Q96N53 147 aa13.51□□□□□ -0.25
CNTNAP3B-212ENST00000617422 RMI2Q96E14 147 aa13.5□□□□□ -0.25
CNTNAP3B-212ENST00000617422 HIST1H4AP62805 103 aaKnown RBP13.49□□□□□ -0.25
CNTNAP3B-212ENST00000617422 XAGE1AQ9HD64 81 aa13.49□□□□□ -0.25
CNTNAP3B-212ENST00000617422 ATOX1O00244 68 aa13.48□□□□□ -0.25
CNTNAP3B-212ENST00000617422 SYCNQ0VAF6 134 aa13.48□□□□□ -0.25
CNTNAP3B-212ENST00000617422 C9orf153Q5TBE3 101 aa13.48□□□□□ -0.25
CNTNAP3B-212ENST00000617422 NCR3O14931 201 aa13.47□□□□□ -0.25
CNTNAP3B-212ENST00000617422 JMJD7-PLA2G4BH0Y9G9 81 aa13.46□□□□□ -0.25
CNTNAP3B-212ENST00000617422 MUC7Q8TAX7 377 aa13.46□□□□□ -0.25
CNTNAP3B-212ENST00000617422 LINC00846Q9NV44 126 aa13.46□□□□□ -0.25
CNTNAP3B-212ENST00000617422 KMT2AQ03164 3969 aa13.45□□□□□ -0.26
CNTNAP3B-212ENST00000617422 COX7CP15954 63 aa13.45□□□□□ -0.26
CNTNAP3B-212ENST00000617422 Q8N814 137 aa13.45□□□□□ -0.26
CNTNAP3B-212ENST00000617422 CCKP06307 115 aa13.44□□□□□ -0.26
CNTNAP3B-212ENST00000617422 Q6ZRP5 223 aa13.44□□□□□ -0.26
CNTNAP3B-212ENST00000617422 NDUFC2-KCTD14E9PQ53 114 aa13.44□□□□□ -0.26
CNTNAP3B-212ENST00000617422 TMEM256-PLSCR3K7ERE1 68 aa13.44□□□□□ -0.26
CNTNAP3B-212ENST00000617422 NBDYA0A0U1RRE5 68 aa13.43□□□□□ -0.26
CNTNAP3B-212ENST00000617422 F8WDY8 70 aa13.43□□□□□ -0.26
CNTNAP3B-212ENST00000617422 SMIM20Q8N5G0 67 aa13.43□□□□□ -0.26
CNTNAP3B-212ENST00000617422 S100A7L2Q5SY68 101 aa13.42□□□□□ -0.26
CNTNAP3B-212ENST00000617422 RPL18AQ02543 176 aaKnown RBP13.41□□□□□ -0.26
CNTNAP3B-212ENST00000617422 IGKV3D-7A0A0C4DH55 119 aa13.39□□□□□ -0.27
CNTNAP3B-212ENST00000617422 CRYGAP11844 174 aa13.37□□□□□ -0.27
CNTNAP3B-212ENST00000617422 M0R2N4 97 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms