RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 TRBV10-3A0A0K0K1G6 114 aa7.1□□□□□ -1.27
SMARCA1-205ENST00000617310 A0A1B0GX51 115 aa7.1□□□□□ -1.27
SMARCA1-205ENST00000617310 EGFEM1PQ0D2K5 195 aa7.09□□□□□ -1.27
SMARCA1-205ENST00000617310 BPY2O14599 106 aa7.09□□□□□ -1.27
SMARCA1-205ENST00000617310 A8MTW9 85 aa7.08□□□□□ -1.28
SMARCA1-205ENST00000617310 Q6ZRU5 148 aa7.08□□□□□ -1.28
SMARCA1-205ENST00000617310 FAM236AA0A1B0GUQ0 79 aa7.08□□□□□ -1.28
SMARCA1-205ENST00000617310 FAM236BA0A1B0GV22 79 aa7.08□□□□□ -1.28
SMARCA1-205ENST00000617310 ADAMTSL4-AS1Q5T5F5 129 aa7.08□□□□□ -1.28
SMARCA1-205ENST00000617310 KRTAP1-3Q8IUG1 177 aa7.08□□□□□ -1.28
SMARCA1-205ENST00000617310 LINC01556Q5JQF7 62 aa7.07□□□□□ -1.28
SMARCA1-205ENST00000617310 LINC00315P59091 139 aa7.07□□□□□ -1.28
SMARCA1-205ENST00000617310 UTP20O75691 2785 aaKnown RBP7.07□□□□□ -1.28
SMARCA1-205ENST00000617310 WFDC9Q8NEX5 89 aa7.07□□□□□ -1.28
SMARCA1-205ENST00000617310 AMELXQ99217 191 aa7.07□□□□□ -1.28
SMARCA1-205ENST00000617310 CRYBG3Q68DQ2 2970 aa7.06□□□□□ -1.28
SMARCA1-205ENST00000617310 A0A1B0GUV1 79 aa7.06□□□□□ -1.28
SMARCA1-205ENST00000617310 KRTAP10-3P60369 221 aa7.06□□□□□ -1.28
SMARCA1-205ENST00000617310 ACYP1P07311 99 aa7.05□□□□□ -1.28
SMARCA1-205ENST00000617310 TIMM17BO60830 172 aa7.05□□□□□ -1.28
SMARCA1-205ENST00000617310 Q8NAQ8 132 aa7.05□□□□□ -1.28
SMARCA1-205ENST00000617310 CSDC2Q9Y534 153 aaKnown RBP7.05□□□□□ -1.28
SMARCA1-205ENST00000617310 IGKV4-1P06312 121 aa7.04□□□□□ -1.28
SMARCA1-205ENST00000617310 K7EIL1 84 aa7.04□□□□□ -1.28
SMARCA1-205ENST00000617310 KRTAP1-1Q07627 177 aa7.04□□□□□ -1.28
SMARCA1-205ENST00000617310 C1orf137Q5JT78 98 aa7.04□□□□□ -1.28
SMARCA1-205ENST00000617310 SDIM1Q6ZPB5 146 aa7.04□□□□□ -1.28
SMARCA1-205ENST00000617310 NDUFC2-KCTD14E9PQ53 114 aa7.04□□□□□ -1.28
SMARCA1-205ENST00000617310 LINC00474Q9P2X8 69 aa7.04□□□□□ -1.28
SMARCA1-205ENST00000617310 TRBV30A0A0K0K1B3 111 aa7.03□□□□□ -1.28
SMARCA1-205ENST00000617310 FAM19A4Q96LR4 140 aa7.03□□□□□ -1.28
SMARCA1-205ENST00000617310 MP68P56378 58 aa7.03□□□□□ -1.28
SMARCA1-205ENST00000617310 HIVEP1P15822 2718 aa7.03□□□□□ -1.28
SMARCA1-205ENST00000617310 KRTAP10-11P60412 298 aa7.03□□□□□ -1.28
SMARCA1-205ENST00000617310 PRLHP81277 87 aa7.03□□□□□ -1.28
SMARCA1-205ENST00000617310 COX17Q14061 63 aa7.02□□□□□ -1.29
SMARCA1-205ENST00000617310 CIRBP-AS1Q8TBR5 109 aa7.02□□□□□ -1.29
SMARCA1-205ENST00000617310 H3BQ85 93 aa7.02□□□□□ -1.29
SMARCA1-205ENST00000617310 PDE6GP18545 87 aa7.02□□□□□ -1.29
SMARCA1-205ENST00000617310 MUC7Q8TAX7 377 aa7.02□□□□□ -1.29
SMARCA1-205ENST00000617310 LRBAP50851 2863 aa7.01□□□□□ -1.29
SMARCA1-205ENST00000617310 TENM4Q6N022 2769 aa7.01□□□□□ -1.29
SMARCA1-205ENST00000617310 WFDC13Q8IUB5 93 aa7.01□□□□□ -1.29
SMARCA1-205ENST00000617310 IGHV3OR16-9A0A0B4J2B5 98 aa7.01□□□□□ -1.29
SMARCA1-205ENST00000617310 DHRS4-AS1Q9P1J3 65 aa7.01□□□□□ -1.29
SMARCA1-205ENST00000617310 B5MCH6 92 aa7□□□□□ -1.29
SMARCA1-205ENST00000617310 LST1O00453 97 aa7□□□□□ -1.29
SMARCA1-205ENST00000617310 ENHOQ6UWT2 76 aa7□□□□□ -1.29
SMARCA1-205ENST00000617310 UPK3BQ9BT76 320 aa7□□□□□ -1.29
SMARCA1-205ENST00000617310 RPL28P46779 137 aaKnown RBP6.99□□□□□ -1.29
SMARCA1-205ENST00000617310 LINC00588Q9Y4M8 146 aa6.99□□□□□ -1.29
SMARCA1-205ENST00000617310 DMBT1Q9UGM3 2413 aaPredicted RBP6.99□□□□□ -1.29
SMARCA1-205ENST00000617310 SPATA3Q8NHX4 192 aa6.99□□□□□ -1.29
SMARCA1-205ENST00000617310 KMT2BQ9UMN6 2715 aaPredicted RBP6.99□□□□□ -1.29
SMARCA1-205ENST00000617310 C10orf25Q5T742 122 aa6.99□□□□□ -1.29
SMARCA1-205ENST00000617310 REG3GQ6UW15 175 aa6.98□□□□□ -1.29
SMARCA1-205ENST00000617310 MRPL55Q7Z7F7 128 aaKnown RBP6.98□□□□□ -1.29
SMARCA1-205ENST00000617310 NDUFV3P56181 108 aaKnown RBP6.97□□□□□ -1.29
SMARCA1-205ENST00000617310 CHKB-CPT1BH3BT56 60 aa6.97□□□□□ -1.29
SMARCA1-205ENST00000617310 CELSR2Q9HCU4 2923 aa6.97□□□□□ -1.29
SMARCA1-205ENST00000617310 LINC00643Q86TS7 51 aa6.97□□□□□ -1.29
SMARCA1-205ENST00000617310 ZNF706Q9Y5V0 76 aaPredicted RBP6.97□□□□□ -1.29
SMARCA1-205ENST00000617310 ZANQ9Y493 2812 aa6.96□□□□□ -1.29
SMARCA1-205ENST00000617310 WWC2-AS2Q96NR7 200 aa6.96□□□□□ -1.3
SMARCA1-205ENST00000617310 A0A087WYN8 130 aa6.96□□□□□ -1.3
SMARCA1-205ENST00000617310 MT-ATP8P03928 68 aa6.96□□□□□ -1.3
SMARCA1-205ENST00000617310 C2orf48Q96LS8 159 aa6.96□□□□□ -1.3
SMARCA1-205ENST00000617310 LINC00337Q8N6G1 96 aa6.96□□□□□ -1.3
SMARCA1-205ENST00000617310 CHTF8P0CG12 524 aa6.95□□□□□ -1.3
SMARCA1-205ENST00000617310 C22orf24Q9Y442 160 aa6.95□□□□□ -1.3
SMARCA1-205ENST00000617310 NBDYA0A0U1RRE5 68 aa6.95□□□□□ -1.3
SMARCA1-205ENST00000617310 C5orf47Q569G3 176 aa6.94□□□□□ -1.3
SMARCA1-205ENST00000617310 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.94□□□□□ -1.3
SMARCA1-205ENST00000617310 ATOX1O00244 68 aa6.94□□□□□ -1.3
SMARCA1-205ENST00000617310 C20orf197Q8N268 126 aa6.94□□□□□ -1.3
SMARCA1-205ENST00000617310 DEFB116Q30KQ4 102 aa6.94□□□□□ -1.3
SMARCA1-205ENST00000617310 C6orf48Q9UBA6 75 aa6.94□□□□□ -1.3
SMARCA1-205ENST00000617310 C19orf73Q9NVV2 129 aa6.93□□□□□ -1.3
SMARCA1-205ENST00000617310 GIG44P09565 113 aaPredicted RBP6.93□□□□□ -1.3
SMARCA1-205ENST00000617310 CSNK1G2-AS1Q8NCQ2 148 aa6.93□□□□□ -1.3
SMARCA1-205ENST00000617310 Q8N814 137 aa6.92□□□□□ -1.3
SMARCA1-205ENST00000617310 SS18L2Q9UHA2 77 aa6.92□□□□□ -1.3
SMARCA1-205ENST00000617310 DNAH10OSP0CZ25 163 aa6.92□□□□□ -1.3
SMARCA1-205ENST00000617310 C16orf90A8MZG2 172 aa6.91□□□□□ -1.3
SMARCA1-205ENST00000617310 PRR4Q16378 134 aa6.91□□□□□ -1.3
SMARCA1-205ENST00000617310 A0A087WSZ3 146 aa6.91□□□□□ -1.3
SMARCA1-205ENST00000617310 KLK9Q2XQG4 91 aa6.91□□□□□ -1.3
SMARCA1-205ENST00000617310 Q9BRP9 147 aa6.91□□□□□ -1.3
SMARCA1-205ENST00000617310 IGLV5-39A0A0G2JS06 123 aa6.9□□□□□ -1.3
SMARCA1-205ENST00000617310 LINC00167Q96N53 147 aa6.9□□□□□ -1.31
SMARCA1-205ENST00000617310 PHF5AQ7RTV0 110 aaKnown RBP6.89□□□□□ -1.31
SMARCA1-205ENST00000617310 XGP55808 180 aa6.89□□□□□ -1.31
SMARCA1-205ENST00000617310 SMCR5Q8TEV8 140 aa6.89□□□□□ -1.31
SMARCA1-205ENST00000617310 NIPBLQ6KC79 2804 aaeCLIP6.89□□□□□ -1.31
SMARCA1-205ENST00000617310 H3BNG1 76 aa6.88□□□□□ -1.31
SMARCA1-205ENST00000617310 CASC2Q6XLA1 102 aa6.88□□□□□ -1.31
SMARCA1-205ENST00000617310 C3orf22Q8N5N4 141 aa6.88□□□□□ -1.31
SMARCA1-205ENST00000617310 RTL8CO15255 209 aa6.88□□□□□ -1.31
SMARCA1-205ENST00000617310 RETNLBQ9BQ08 111 aa6.88□□□□□ -1.31
SMARCA1-205ENST00000617310 SOSTDC1Q6X4U4 206 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms