RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 IGLV7-46A0A075B6I9 117 aa11.96□□□□□ -0.49
TRAPPC3-208ENST00000616074 LINC00614P0C842 121 aa11.96□□□□□ -0.49
TRAPPC3-208ENST00000616074 CBLN2Q8IUK8 224 aa11.96□□□□□ -0.49
TRAPPC3-208ENST00000616074 TMEM170BQ5T4T1 132 aa11.95□□□□□ -0.5
TRAPPC3-208ENST00000616074 KRTAP9-2Q9BYQ4 174 aa11.95□□□□□ -0.5
TRAPPC3-208ENST00000616074 RPS10P5Q9NQ39 176 aa11.95□□□□□ -0.5
TRAPPC3-208ENST00000616074 CTAG1AP78358 180 aa11.94□□□□□ -0.5
TRAPPC3-208ENST00000616074 RHEBQ15382 184 aa11.94□□□□□ -0.5
TRAPPC3-208ENST00000616074 SFTA2Q6UW10 78 aa11.94□□□□□ -0.5
TRAPPC3-208ENST00000616074 BAGE3Q86Y29 109 aa11.94□□□□□ -0.5
TRAPPC3-208ENST00000616074 HIGD2AQ9BW72 106 aa11.94□□□□□ -0.5
TRAPPC3-208ENST00000616074 C10orf91Q5T1B1 145 aa11.93□□□□□ -0.5
TRAPPC3-208ENST00000616074 COMMD7Q86VX2 200 aa11.93□□□□□ -0.5
TRAPPC3-208ENST00000616074 TRAPPC1Q9Y5R8 145 aa11.93□□□□□ -0.5
TRAPPC3-208ENST00000616074 LINC00158P58513 81 aa11.9□□□□□ -0.5
TRAPPC3-208ENST00000616074 SPRR4Q96PI1 79 aa11.9□□□□□ -0.5
TRAPPC3-208ENST00000616074 A0A0U1RRA0 63 aa11.89□□□□□ -0.51
TRAPPC3-208ENST00000616074 PPDPFQ9H3Y8 114 aa11.89□□□□□ -0.51
TRAPPC3-208ENST00000616074 CHTOPQ9Y3Y2 248 aaKnown RBP11.88□□□□□ -0.51
TRAPPC3-208ENST00000616074 TMEM223A0PJW6 202 aa11.86□□□□□ -0.51
TRAPPC3-208ENST00000616074 SPAG11AQ6PDA7 123 aa11.86□□□□□ -0.51
TRAPPC3-208ENST00000616074 PRYO14603 147 aa11.83□□□□□ -0.52
TRAPPC3-208ENST00000616074 SMIM13P0DJ93 91 aa11.83□□□□□ -0.52
TRAPPC3-208ENST00000616074 ZNF706Q9Y5V0 76 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC3-208ENST00000616074 TRAV12-1A0A0B4J245 112 aa11.81□□□□□ -0.52
TRAPPC3-208ENST00000616074 NCR3O14931 201 aa11.81□□□□□ -0.52
TRAPPC3-208ENST00000616074 BOD1L2Q8IYS8 172 aa11.81□□□□□ -0.52
TRAPPC3-208ENST00000616074 DAND5Q8N907 189 aa11.81□□□□□ -0.52
TRAPPC3-208ENST00000616074 SPRR1AP35321 89 aa11.8□□□□□ -0.52
TRAPPC3-208ENST00000616074 C4orf48Q5BLP8 95 aa11.8□□□□□ -0.52
TRAPPC3-208ENST00000616074 MEIG1Q5JSS6 88 aa11.8□□□□□ -0.52
TRAPPC3-208ENST00000616074 FP248Q71RG6 208 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC3-208ENST00000616074 Q8NBF4 154 aa11.8□□□□□ -0.52
TRAPPC3-208ENST00000616074 ATP6V1G1O75348 118 aa11.79□□□□□ -0.52
TRAPPC3-208ENST00000616074 MIR7-3HGQ8N6C7 128 aa11.79□□□□□ -0.52
TRAPPC3-208ENST00000616074 LINC00337Q8N6G1 96 aa11.79□□□□□ -0.52
TRAPPC3-208ENST00000616074 IFI27L1Q96BM0 104 aa11.79□□□□□ -0.52
TRAPPC3-208ENST00000616074 KCNQ1DNQ9H478 68 aa11.79□□□□□ -0.52
TRAPPC3-208ENST00000616074 SMCR5Q8TEV8 140 aa11.78□□□□□ -0.52
TRAPPC3-208ENST00000616074 KRTAP4-16G5E9R7 235 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC3-208ENST00000616074 CHCHD1Q96BP2 118 aaKnown RBP11.76□□□□□ -0.53
TRAPPC3-208ENST00000616074 ETDCA0A1B0GVM5 59 aa11.75□□□□□ -0.53
TRAPPC3-208ENST00000616074 APOC3P02656 99 aa11.75□□□□□ -0.53
TRAPPC3-208ENST00000616074 HERV-K104P63124 156 aa11.75□□□□□ -0.53
TRAPPC3-208ENST00000616074 KRTAP13-3Q3SY46 172 aa11.75□□□□□ -0.53
TRAPPC3-208ENST00000616074 TRBV10-3A0A0K0K1G6 114 aa11.74□□□□□ -0.53
TRAPPC3-208ENST00000616074 LINC00483Q53H64 154 aa11.73□□□□□ -0.53
TRAPPC3-208ENST00000616074 NDUFA12Q9UI09 145 aa11.73□□□□□ -0.53
TRAPPC3-208ENST00000616074 SNAPINO95295 136 aa11.71□□□□□ -0.53
TRAPPC3-208ENST00000616074 SPINK1P00995 79 aa11.71□□□□□ -0.53
TRAPPC3-208ENST00000616074 LINC00587B1AMM8 73 aa11.7□□□□□ -0.54
TRAPPC3-208ENST00000616074 GAGE2AQ6NT46 116 aa11.7□□□□□ -0.54
TRAPPC3-208ENST00000616074 SVBPQ8N300 66 aa11.7□□□□□ -0.54
TRAPPC3-208ENST00000616074 YPEL4Q96NS1 127 aa11.7□□□□□ -0.54
TRAPPC3-208ENST00000616074 MYMXA0A1B0GTQ4 84 aa11.69□□□□□ -0.54
TRAPPC3-208ENST00000616074 FAM19A2Q8N3H0 131 aa11.69□□□□□ -0.54
TRAPPC3-208ENST00000616074 B5MCH6 92 aa11.68□□□□□ -0.54
TRAPPC3-208ENST00000616074 ERC2-IT1O76042 136 aa11.68□□□□□ -0.54
TRAPPC3-208ENST00000616074 TSPEAR-AS2P59090 65 aa11.68□□□□□ -0.54
TRAPPC3-208ENST00000616074 ASB16-AS1Q495Z4 193 aa11.68□□□□□ -0.54
TRAPPC3-208ENST00000616074 MAP1LC3CQ9BXW4 147 aa11.68□□□□□ -0.54
TRAPPC3-208ENST00000616074 H0Y8G0 127 aa11.67□□□□□ -0.54
TRAPPC3-208ENST00000616074 MOBPQ13875 183 aa11.67□□□□□ -0.54
TRAPPC3-208ENST00000616074 NDUFA5Q16718 116 aa11.67□□□□□ -0.54
TRAPPC3-208ENST00000616074 IGLV9-49A0A0B4J1Y8 123 aa11.66□□□□□ -0.54
TRAPPC3-208ENST00000616074 HSBP1O75506 76 aa11.66□□□□□ -0.54
TRAPPC3-208ENST00000616074 S100A12P80511 92 aa11.66□□□□□ -0.54
TRAPPC3-208ENST00000616074 DDTP30046 118 aa11.65□□□□□ -0.54
TRAPPC3-208ENST00000616074 LOC107984156A0A0G2JMH3 177 aa11.64□□□□□ -0.55
TRAPPC3-208ENST00000616074 KRTAP9-6A0A140TA67 174 aa11.64□□□□□ -0.55
TRAPPC3-208ENST00000616074 ARL17AQ8IVW1 177 aa11.64□□□□□ -0.55
TRAPPC3-208ENST00000616074 Q9BRP9 147 aa11.64□□□□□ -0.55
TRAPPC3-208ENST00000616074 LEPROTO15243 131 aa11.63□□□□□ -0.55
TRAPPC3-208ENST00000616074 KRTAP4-1Q9BYQ7 146 aa11.63□□□□□ -0.55
TRAPPC3-208ENST00000616074 TRBV10-2A0A0K0K1G8 114 aa11.62□□□□□ -0.55
TRAPPC3-208ENST00000616074 RPS29P62273 56 aaKnown RBP11.62□□□□□ -0.55
TRAPPC3-208ENST00000616074 Q8N377 158 aa11.62□□□□□ -0.55
TRAPPC3-208ENST00000616074 Q6ZRX8 168 aa11.61□□□□□ -0.55
TRAPPC3-208ENST00000616074 SSBP3-AS1Q7Z2R9 100 aa11.61□□□□□ -0.55
TRAPPC3-208ENST00000616074 SEC61BP60468 96 aaKnown RBP11.59□□□□□ -0.55
TRAPPC3-208ENST00000616074 SPANXB1Q9NS25 103 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC3-208ENST00000616074 J3QQQ9 107 aa11.58□□□□□ -0.56
TRAPPC3-208ENST00000616074 LEPROTL1O95214 131 aa11.58□□□□□ -0.56
TRAPPC3-208ENST00000616074 PLNP26678 52 aa11.57□□□□□ -0.56
TRAPPC3-208ENST00000616074 LINC00310P59036 64 aa11.57□□□□□ -0.56
TRAPPC3-208ENST00000616074 MIEN1Q9BRT3 115 aa11.57□□□□□ -0.56
TRAPPC3-208ENST00000616074 IGLV6-57P01721 117 aa11.56□□□□□ -0.56
TRAPPC3-208ENST00000616074 SLC25A20O43772 301 aa11.55□□□□□ -0.56
TRAPPC3-208ENST00000616074 SERF1AO75920 110 aa11.55□□□□□ -0.56
TRAPPC3-208ENST00000616074 LINC01547P58512 204 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC3-208ENST00000616074 S100A7L2Q5SY68 101 aa11.55□□□□□ -0.56
TRAPPC3-208ENST00000616074 TRAV23DV6A0A075B6W5 121 aa11.54□□□□□ -0.56
TRAPPC3-208ENST00000616074 NDUFC2O95298 119 aa11.54□□□□□ -0.56
TRAPPC3-208ENST00000616074 TRGC2P03986 189 aa11.54□□□□□ -0.56
TRAPPC3-208ENST00000616074 NMUP48645 174 aa11.54□□□□□ -0.56
TRAPPC3-208ENST00000616074 HERVK_113P61574 105 aa11.54□□□□□ -0.56
TRAPPC3-208ENST00000616074 PMCHL2Q9BQD1 86 aa11.54□□□□□ -0.56
TRAPPC3-208ENST00000616074 DPM2O94777 84 aa11.53□□□□□ -0.56
TRAPPC3-208ENST00000616074 LGALS3P17931 250 aaKnown RBP11.53□□□□□ -0.56
TRAPPC3-208ENST00000616074 C9orf153Q5TBE3 101 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms