RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 KRTAP21-3Q3LHN1 58 aa6.49□□□□□ -1.37
TNFRSF9-204ENST00000615230 GIG44P09565 113 aaPredicted RBP6.48□□□□□ -1.37
TNFRSF9-204ENST00000615230 PRR4Q16378 134 aa6.48□□□□□ -1.37
TNFRSF9-204ENST00000615230 KCNQ1DNQ9H478 68 aa6.48□□□□□ -1.37
TNFRSF9-204ENST00000615230 LOC110117498A0A087WWA1 95 aa6.48□□□□□ -1.37
TNFRSF9-204ENST00000615230 VPREB1P12018 145 aa6.47□□□□□ -1.37
TNFRSF9-204ENST00000615230 CHTF8P0CG12 524 aa6.47□□□□□ -1.37
TNFRSF9-204ENST00000615230 IGLV6-57P01721 117 aa6.47□□□□□ -1.37
TNFRSF9-204ENST00000615230 LINC00208Q96KT6 92 aa6.47□□□□□ -1.37
TNFRSF9-204ENST00000615230 TRBV7-4A0A0J9YYF1 115 aa6.46□□□□□ -1.38
TNFRSF9-204ENST00000615230 PTPN13Q12923 2485 aa6.46□□□□□ -1.38
TNFRSF9-204ENST00000615230 LINC00528Q8N1L1 170 aa6.46□□□□□ -1.38
TNFRSF9-204ENST00000615230 IGLV7-43P04211 117 aa6.46□□□□□ -1.38
TNFRSF9-204ENST00000615230 C15orf56Q8N910 161 aa6.46□□□□□ -1.38
TNFRSF9-204ENST00000615230 ATRXP46100 2492 aa6.45□□□□□ -1.38
TNFRSF9-204ENST00000615230 MED13LQ71F56 2210 aa6.45□□□□□ -1.38
TNFRSF9-204ENST00000615230 COX7CP15954 63 aa6.45□□□□□ -1.38
TNFRSF9-204ENST00000615230 C7orf65Q6ZTY9 151 aa6.44□□□□□ -1.38
TNFRSF9-204ENST00000615230 MT-ATP8P03928 68 aa6.44□□□□□ -1.38
TNFRSF9-204ENST00000615230 AGRNO00468 2067 aa6.44□□□□□ -1.38
TNFRSF9-204ENST00000615230 RETNLBQ9BQ08 111 aa6.44□□□□□ -1.38
TNFRSF9-204ENST00000615230 ST20-AS1Q8NBB2 130 aa6.43□□□□□ -1.38
TNFRSF9-204ENST00000615230 Q8N3U1 123 aa6.43□□□□□ -1.38
TNFRSF9-204ENST00000615230 Q96NJ1 140 aa6.42□□□□□ -1.38
TNFRSF9-204ENST00000615230 TNCP24821 2201 aa6.42□□□□□ -1.38
TNFRSF9-204ENST00000615230 HIVEP3Q5T1R4 2406 aa6.42□□□□□ -1.38
TNFRSF9-204ENST00000615230 IGLV5-37A0A075B6J1 123 aa6.42□□□□□ -1.38
TNFRSF9-204ENST00000615230 COX6B2Q6YFQ2 88 aa6.42□□□□□ -1.38
TNFRSF9-204ENST00000615230 IGKV2D-30A0A075B6S6 120 aa6.41□□□□□ -1.38
TNFRSF9-204ENST00000615230 IGKV2-30P06310 120 aa6.41□□□□□ -1.38
TNFRSF9-204ENST00000615230 PSORS1C2Q9UIG4 136 aa6.41□□□□□ -1.38
TNFRSF9-204ENST00000615230 ACYP2P14621 99 aa6.4□□□□□ -1.38
TNFRSF9-204ENST00000615230 SPINK1P00995 79 aa6.4□□□□□ -1.39
TNFRSF9-204ENST00000615230 CDIP1Q9H305 208 aa6.4□□□□□ -1.39
TNFRSF9-204ENST00000615230 C1orf64Q8NEQ6 169 aa6.39□□□□□ -1.39
TNFRSF9-204ENST00000615230 BRK1Q8WUW1 75 aa6.39□□□□□ -1.39
TNFRSF9-204ENST00000615230 SERTAD4-AS1Q5TG53 156 aa6.39□□□□□ -1.39
TNFRSF9-204ENST00000615230 TRAV22A0A0B4J277 110 aa6.38□□□□□ -1.39
TNFRSF9-204ENST00000615230 SNURFQ9Y675 71 aa6.38□□□□□ -1.39
TNFRSF9-204ENST00000615230 LOC101927531A0A1B0GV80 90 aa6.38□□□□□ -1.39
TNFRSF9-204ENST00000615230 CSPG4Q6UVK1 2322 aa6.38□□□□□ -1.39
TNFRSF9-204ENST00000615230 LCE6AA0A183 80 aa6.38□□□□□ -1.39
TNFRSF9-204ENST00000615230 A8MWP4 228 aa6.38□□□□□ -1.39
TNFRSF9-204ENST00000615230 TRBV7-7A0A0K0K1E9 115 aa6.38□□□□□ -1.39
TNFRSF9-204ENST00000615230 CD164Q04900 197 aa6.38□□□□□ -1.39
TNFRSF9-204ENST00000615230 CACNA1AO00555 2505 aa6.38□□□□□ -1.39
TNFRSF9-204ENST00000615230 Q6ZQT0 140 aa6.37□□□□□ -1.39
TNFRSF9-204ENST00000615230 FAM168BA1KXE4 195 aa6.37□□□□□ -1.39
TNFRSF9-204ENST00000615230 RBM12B-AS1Q9P1G2 102 aa6.37□□□□□ -1.39
TNFRSF9-204ENST00000615230 SPG11Q96JI7 2443 aa6.36□□□□□ -1.39
TNFRSF9-204ENST00000615230 DEFB116Q30KQ4 102 aa6.36□□□□□ -1.39
TNFRSF9-204ENST00000615230 SOSTDC1Q6X4U4 206 aa6.35□□□□□ -1.39
TNFRSF9-204ENST00000615230 PLXNB1O43157 2135 aa6.35□□□□□ -1.39
TNFRSF9-204ENST00000615230 FAM229BQ4G0N7 80 aa6.35□□□□□ -1.39
TNFRSF9-204ENST00000615230 PCOTHQ58A44 107 aa6.35□□□□□ -1.39
TNFRSF9-204ENST00000615230 Q9UF83 564 aa6.35□□□□□ -1.39
TNFRSF9-204ENST00000615230 C9orf129Q5T035 196 aaKnown RBP6.34□□□□□ -1.39
TNFRSF9-204ENST00000615230 TMEM254Q8TBM7 123 aa6.34□□□□□ -1.39
TNFRSF9-204ENST00000615230 MRPL34Q9BQ48 92 aaKnown RBP6.34□□□□□ -1.39
TNFRSF9-204ENST00000615230 NOTCH2Q04721 2471 aa6.34□□□□□ -1.4
TNFRSF9-204ENST00000615230 A6NED7 52 aa6.33□□□□□ -1.4
TNFRSF9-204ENST00000615230 SPRR4Q96PI1 79 aa6.33□□□□□ -1.4
TNFRSF9-204ENST00000615230 SMR3BP02814 79 aaPredicted RBP6.32□□□□□ -1.4
TNFRSF9-204ENST00000615230 WNK1Q9H4A3 2382 aa6.32□□□□□ -1.4
TNFRSF9-204ENST00000615230 MPLKIPQ8TAP9 179 aa6.32□□□□□ -1.4
TNFRSF9-204ENST00000615230 LINC00846Q9NV44 126 aa6.32□□□□□ -1.4
TNFRSF9-204ENST00000615230 SMIM29Q86T20 159 aa6.32□□□□□ -1.4
TNFRSF9-204ENST00000615230 SORL1Q92673 2214 aa6.32□□□□□ -1.4
TNFRSF9-204ENST00000615230 ZNF462Q96JM2 2506 aa6.31□□□□□ -1.4
TNFRSF9-204ENST00000615230 TNP2Q05952 138 aa6.31□□□□□ -1.4
TNFRSF9-204ENST00000615230 LITAFQ99732 161 aa6.31□□□□□ -1.4
TNFRSF9-204ENST00000615230 SMIM26A0A096LP01 95 aa6.3□□□□□ -1.4
TNFRSF9-204ENST00000615230 A0A0U1RQV1 116 aa6.3□□□□□ -1.4
TNFRSF9-204ENST00000615230 DOPEY1Q5JWR5 2465 aa6.3□□□□□ -1.4
TNFRSF9-204ENST00000615230 A0A1B0GVX0 72 aa6.28□□□□□ -1.4
TNFRSF9-204ENST00000615230 PLAC8Q9NZF1 115 aa6.28□□□□□ -1.4
TNFRSF9-204ENST00000615230 IGFL1Q6UW32 110 aa6.28□□□□□ -1.4
TNFRSF9-204ENST00000615230 LRRK2Q5S007 2527 aa6.27□□□□□ -1.41
TNFRSF9-204ENST00000615230 FAM218AQ96MZ4 157 aa6.27□□□□□ -1.41
TNFRSF9-204ENST00000615230 A0A1W2PNN7 141 aa6.27□□□□□ -1.41
TNFRSF9-204ENST00000615230 TLN1Q9Y490 2541 aaKnown RBP6.26□□□□□ -1.41
TNFRSF9-204ENST00000615230 CCDC168Q8NDH2 2452 aa6.26□□□□□ -1.41
TNFRSF9-204ENST00000615230 C8orf17Q9NRJ1 99 aa6.26□□□□□ -1.41
TNFRSF9-204ENST00000615230 NOTCH3Q9UM47 2321 aa6.26□□□□□ -1.41
TNFRSF9-204ENST00000615230 ANKRD17O75179 2603 aaKnown RBP6.24□□□□□ -1.41
TNFRSF9-204ENST00000615230 A0A087WVE0 104 aa6.24□□□□□ -1.41
TNFRSF9-204ENST00000615230 DSCAML1Q8TD84 2053 aa6.24□□□□□ -1.41
TNFRSF9-204ENST00000615230 A0A1B0GU69 56 aa6.24□□□□□ -1.41
TNFRSF9-204ENST00000615230 ERC2-IT1O76042 136 aa6.22□□□□□ -1.41
TNFRSF9-204ENST00000615230 CR1P17927 2039 aa6.22□□□□□ -1.41
TNFRSF9-204ENST00000615230 DSCR10P59022 87 aa6.22□□□□□ -1.41
TNFRSF9-204ENST00000615230 PRR15Q8IV56 129 aa6.22□□□□□ -1.41
TNFRSF9-204ENST00000615230 PIEZO2Q9H5I5 2752 aa6.22□□□□□ -1.41
TNFRSF9-204ENST00000615230 OXTP01178 125 aa6.22□□□□□ -1.41
TNFRSF9-204ENST00000615230 IGLV7-46A0A075B6I9 117 aa6.21□□□□□ -1.41
TNFRSF9-204ENST00000615230 OBSCN-AS1Q96MR7 158 aa6.21□□□□□ -1.42
TNFRSF9-204ENST00000615230 SVIPQ8NHG7 77 aa6.21□□□□□ -1.42
TNFRSF9-204ENST00000615230 Q6ZSA8 131 aa6.2□□□□□ -1.42
TNFRSF9-204ENST00000615230 C9orf92A6NGG3 77 aa6.2□□□□□ -1.42
TNFRSF9-204ENST00000615230 Q8N377 158 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms