RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 MAP1LC3CQ9BXW4 147 aa7.3□□□□□ -1.24
PDLIM2-218ENST00000614502 XAGE1AQ9HD64 81 aa7.3□□□□□ -1.24
PDLIM2-218ENST00000614502 RPL28P46779 137 aaKnown RBP7.29□□□□□ -1.24
PDLIM2-218ENST00000614502 SFTA2Q6UW10 78 aa7.29□□□□□ -1.24
PDLIM2-218ENST00000614502 DPM2O94777 84 aa7.28□□□□□ -1.24
PDLIM2-218ENST00000614502 PLNP26678 52 aa7.28□□□□□ -1.24
PDLIM2-218ENST00000614502 PMCHL2Q9BQD1 86 aa7.28□□□□□ -1.24
PDLIM2-218ENST00000614502 SYS1-DBNDD2H3BUS1 97 aa7.27□□□□□ -1.25
PDLIM2-218ENST00000614502 BCE1O60756 84 aa7.27□□□□□ -1.25
PDLIM2-218ENST00000614502 IGKCP01834 107 aa7.27□□□□□ -1.25
PDLIM2-218ENST00000614502 COX17Q14061 63 aa7.27□□□□□ -1.25
PDLIM2-218ENST00000614502 ERG28Q9UKR5 140 aa7.27□□□□□ -1.25
PDLIM2-218ENST00000614502 PFN2P35080 140 aa7.26□□□□□ -1.25
PDLIM2-218ENST00000614502 LEPROTO15243 131 aa7.25□□□□□ -1.25
PDLIM2-218ENST00000614502 PET117Q6UWS5 81 aa7.25□□□□□ -1.25
PDLIM2-218ENST00000614502 NKAPP1Q8N9T2 125 aa7.25□□□□□ -1.25
PDLIM2-218ENST00000614502 IGLV5-37A0A075B6J1 123 aa7.24□□□□□ -1.25
PDLIM2-218ENST00000614502 C3orf79P0CE67 100 aa7.24□□□□□ -1.25
PDLIM2-218ENST00000614502 LINC01545Q5VT33 79 aa7.24□□□□□ -1.25
PDLIM2-218ENST00000614502 LINC00167Q96N53 147 aa7.24□□□□□ -1.25
PDLIM2-218ENST00000614502 NDUFA12Q9UI09 145 aa7.24□□□□□ -1.25
PDLIM2-218ENST00000614502 CRYGAP11844 174 aa7.23□□□□□ -1.25
PDLIM2-218ENST00000614502 TSPEAR-AS2P59090 65 aa7.23□□□□□ -1.25
PDLIM2-218ENST00000614502 HERVK_113P61574 105 aa7.23□□□□□ -1.25
PDLIM2-218ENST00000614502 HERV-K104P63124 156 aa7.23□□□□□ -1.25
PDLIM2-218ENST00000614502 PRR4Q16378 134 aa7.23□□□□□ -1.25
PDLIM2-218ENST00000614502 PLEKHB2Q96CS7 222 aa7.23□□□□□ -1.25
PDLIM2-218ENST00000614502 SND1-IT1Q9HBX3 110 aa7.23□□□□□ -1.25
PDLIM2-218ENST00000614502 MYMXA0A1B0GTQ4 84 aa7.22□□□□□ -1.25
PDLIM2-218ENST00000614502 RPL37AP8A6NKH3 93 aa7.22□□□□□ -1.25
PDLIM2-218ENST00000614502 J3QQQ9 107 aa7.22□□□□□ -1.25
PDLIM2-218ENST00000614502 MUC2Q02817 5179 aa7.22□□□□□ -1.25
PDLIM2-218ENST00000614502 E9PLD3 99 aa7.21□□□□□ -1.26
PDLIM2-218ENST00000614502 UBE2AP49459 152 aa7.21□□□□□ -1.26
PDLIM2-218ENST00000614502 LINC00158P58513 81 aa7.21□□□□□ -1.26
PDLIM2-218ENST00000614502 TYMSOSQ8TAI1 123 aa7.21□□□□□ -1.26
PDLIM2-218ENST00000614502 LINC00587B1AMM8 73 aa7.2□□□□□ -1.26
PDLIM2-218ENST00000614502 SMIM13P0DJ93 91 aa7.2□□□□□ -1.26
PDLIM2-218ENST00000614502 NMUP48645 174 aa7.2□□□□□ -1.26
PDLIM2-218ENST00000614502 KRTDAPP60985 99 aa7.2□□□□□ -1.26
PDLIM2-218ENST00000614502 RPL24P83731 157 aaKnown RBP7.2□□□□□ -1.26
PDLIM2-218ENST00000614502 A0A0U1RRA0 63 aa7.19□□□□□ -1.26
PDLIM2-218ENST00000614502 GAGE10A6NGK3 116 aa7.19□□□□□ -1.26
PDLIM2-218ENST00000614502 VPREB1P12018 145 aa7.19□□□□□ -1.26
PDLIM2-218ENST00000614502 MEIG1Q5JSS6 88 aa7.19□□□□□ -1.26
PDLIM2-218ENST00000614502 HIST3H2BBQ8N257 126 aa7.19□□□□□ -1.26
PDLIM2-218ENST00000614502 LGALS3P17931 250 aaKnown RBP7.18□□□□□ -1.26
PDLIM2-218ENST00000614502 A0A087X002 238 aa7.17□□□□□ -1.26
PDLIM2-218ENST00000614502 FAM229BQ4G0N7 80 aa7.17□□□□□ -1.26
PDLIM2-218ENST00000614502 MIR7-3HGQ8N6C7 128 aa7.17□□□□□ -1.26
PDLIM2-218ENST00000614502 Q8NDZ9 215 aa7.17□□□□□ -1.26
PDLIM2-218ENST00000614502 IGKV2-28A0A075B6P5 120 aa7.16□□□□□ -1.26
PDLIM2-218ENST00000614502 C20orf202A1L168 122 aa7.16□□□□□ -1.26
PDLIM2-218ENST00000614502 TSPAN13O95857 204 aa7.16□□□□□ -1.26
PDLIM2-218ENST00000614502 IGKV2D-28P01615 120 aa7.16□□□□□ -1.26
PDLIM2-218ENST00000614502 S100A6P06703 90 aa7.16□□□□□ -1.26
PDLIM2-218ENST00000614502 CTAG1AP78358 180 aa7.16□□□□□ -1.26
PDLIM2-218ENST00000614502 HIST1H2BLQ99880 126 aa7.16□□□□□ -1.26
PDLIM2-218ENST00000614502 LOC107984156A0A0G2JMH3 177 aa7.15□□□□□ -1.26
PDLIM2-218ENST00000614502 S100A2P29034 98 aa7.15□□□□□ -1.26
PDLIM2-218ENST00000614502 KRTAP13-1Q8IUC0 172 aa7.15□□□□□ -1.26
PDLIM2-218ENST00000614502 ARL17AQ8IVW1 177 aa7.15□□□□□ -1.26
PDLIM2-218ENST00000614502 IGKV2D-26A0A0A0MRZ7 120 aa7.14□□□□□ -1.27
PDLIM2-218ENST00000614502 A0A0J9YXY3 114 aa7.14□□□□□ -1.27
PDLIM2-218ENST00000614502 A0A0U1RQV1 116 aa7.14□□□□□ -1.27
PDLIM2-218ENST00000614502 AKR1D1P51857 326 aa7.14□□□□□ -1.27
PDLIM2-218ENST00000614502 FAM19A1Q7Z5A9 133 aa7.14□□□□□ -1.27
PDLIM2-218ENST00000614502 TMEM126AQ9H061 195 aa7.14□□□□□ -1.27
PDLIM2-218ENST00000614502 C5orf52A6NGY3 159 aa7.13□□□□□ -1.27
PDLIM2-218ENST00000614502 SNRPEP62304 92 aaKnown RBP7.13□□□□□ -1.27
PDLIM2-218ENST00000614502 BOD1L2Q8IYS8 172 aa7.13□□□□□ -1.27
PDLIM2-218ENST00000614502 M0R378 163 aa7.12□□□□□ -1.27
PDLIM2-218ENST00000614502 DAND5Q8N907 189 aa7.12□□□□□ -1.27
PDLIM2-218ENST00000614502 LINC00304Q8N9R0 145 aa7.12□□□□□ -1.27
PDLIM2-218ENST00000614502 PRLHP81277 87 aa7.11□□□□□ -1.27
PDLIM2-218ENST00000614502 ANKRD39Q53RE8 183 aa7.11□□□□□ -1.27
PDLIM2-218ENST00000614502 ADAMTSL4-AS1Q5T5F5 129 aa7.11□□□□□ -1.27
PDLIM2-218ENST00000614502 ATOH7Q8N100 152 aa7.11□□□□□ -1.27
PDLIM2-218ENST00000614502 TTTY13Q9BZ97 58 aa7.11□□□□□ -1.27
PDLIM2-218ENST00000614502 ZNF815PA8K554 130 aa7.1□□□□□ -1.27
PDLIM2-218ENST00000614502 KRTAP13-2Q52LG2 175 aa7.1□□□□□ -1.27
PDLIM2-218ENST00000614502 LITAFQ99732 161 aa7.1□□□□□ -1.27
PDLIM2-218ENST00000614502 KRTAP9-2Q9BYQ4 174 aa7.1□□□□□ -1.27
PDLIM2-218ENST00000614502 ANAPC11Q9NYG5 84 aa7.1□□□□□ -1.27
PDLIM2-218ENST00000614502 TIMM17BO60830 172 aa7.09□□□□□ -1.27
PDLIM2-218ENST00000614502 TMEM238C9JI98 176 aa7.08□□□□□ -1.28
PDLIM2-218ENST00000614502 NCR3O14931 201 aa7.08□□□□□ -1.28
PDLIM2-218ENST00000614502 SOSTDC1Q6X4U4 206 aa7.08□□□□□ -1.28
PDLIM2-218ENST00000614502 TRBV10-2A0A0K0K1G8 114 aa7.07□□□□□ -1.28
PDLIM2-218ENST00000614502 EIF4EBP3O60516 100 aaPredicted RBP7.07□□□□□ -1.28
PDLIM2-218ENST00000614502 NDUFC2O95298 119 aa7.07□□□□□ -1.28
PDLIM2-218ENST00000614502 SPAG11AQ6PDA7 123 aa7.07□□□□□ -1.28
PDLIM2-218ENST00000614502 MIEN1Q9BRT3 115 aa7.07□□□□□ -1.28
PDLIM2-218ENST00000614502 ZNF706Q9Y5V0 76 aaPredicted RBP7.07□□□□□ -1.28
PDLIM2-218ENST00000614502 FAT4Q6V0I7 4981 aa7.06□□□□□ -1.28
PDLIM2-218ENST00000614502 NPC2P61916 151 aa7.06□□□□□ -1.28
PDLIM2-218ENST00000614502 S100A12P80511 92 aa7.06□□□□□ -1.28
PDLIM2-218ENST00000614502 HIGD2AQ9BW72 106 aa7.06□□□□□ -1.28
PDLIM2-218ENST00000614502 TRBV10-3A0A0K0K1G6 114 aa7.05□□□□□ -1.28
PDLIM2-218ENST00000614502 PRYO14603 147 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms