RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 X6R8D5 127 aa8.63□□□□□ -1.03
MSH6-213ENST00000614496 LINC01600Q96MT4 127 aa8.63□□□□□ -1.03
MSH6-213ENST00000614496 C19orf73Q9NVV2 129 aa8.63□□□□□ -1.03
MSH6-213ENST00000614496 MIFP14174 115 aa8.62□□□□□ -1.03
MSH6-213ENST00000614496 CUBNO60494 3623 aa8.62□□□□□ -1.03
MSH6-213ENST00000614496 LINC00575Q6W349 94 aa8.62□□□□□ -1.03
MSH6-213ENST00000614496 TMEM258P61165 79 aa8.62□□□□□ -1.03
MSH6-213ENST00000614496 ZNF73O43830 326 aaPredicted RBP8.62□□□□□ -1.03
MSH6-213ENST00000614496 NDUFC2O95298 119 aa8.62□□□□□ -1.03
MSH6-213ENST00000614496 DPH3Q96FX2 82 aa8.62□□□□□ -1.03
MSH6-213ENST00000614496 FAM19A5Q7Z5A7 132 aaPredicted RBP8.61□□□□□ -1.03
MSH6-213ENST00000614496 C5orf47Q569G3 176 aa8.61□□□□□ -1.03
MSH6-213ENST00000614496 MXRA5Q9NR99 2828 aa8.61□□□□□ -1.03
MSH6-213ENST00000614496 C3orf84H3BNL1 204 aa8.61□□□□□ -1.03
MSH6-213ENST00000614496 RETNQ9HD89 108 aa8.61□□□□□ -1.03
MSH6-213ENST00000614496 SETXQ7Z333 2677 aaKnown RBP8.6□□□□□ -1.03
MSH6-213ENST00000614496 BSNQ9UPA5 3926 aa8.6□□□□□ -1.03
MSH6-213ENST00000614496 KPRPQ5T749 579 aaPredicted RBP8.6□□□□□ -1.03
MSH6-213ENST00000614496 IGHV4-30-4P0DP06 118 aa8.59□□□□□ -1.03
MSH6-213ENST00000614496 PDE6GP18545 87 aa8.59□□□□□ -1.03
MSH6-213ENST00000614496 FAM236DA0A1B0GTK5 79 aa8.58□□□□□ -1.04
MSH6-213ENST00000614496 FAM236CP0DP71 79 aa8.58□□□□□ -1.04
MSH6-213ENST00000614496 CELSR2Q9HCU4 2923 aa8.58□□□□□ -1.04
MSH6-213ENST00000614496 ETDCA0A1B0GVM5 59 aa8.58□□□□□ -1.04
MSH6-213ENST00000614496 LINC01561Q8N1V8 128 aa8.58□□□□□ -1.04
MSH6-213ENST00000614496 CRYGAP11844 174 aa8.58□□□□□ -1.04
MSH6-213ENST00000614496 UBE2BP63146 152 aa8.58□□□□□ -1.04
MSH6-213ENST00000614496 OXLD1Q5BKU9 147 aa8.57□□□□□ -1.04
MSH6-213ENST00000614496 Q6ZVQ6 151 aa8.57□□□□□ -1.04
MSH6-213ENST00000614496 WFDC10BQ8IUB3 73 aa8.57□□□□□ -1.04
MSH6-213ENST00000614496 KRTAP1-3Q8IUG1 177 aa8.56□□□□□ -1.04
MSH6-213ENST00000614496 F8WEM9 126 aa8.55□□□□□ -1.04
MSH6-213ENST00000614496 FUSP35637 526 aaKnown RBP eCLIP8.55□□□□□ -1.04
MSH6-213ENST00000614496 BPY2O14599 106 aa8.55□□□□□ -1.04
MSH6-213ENST00000614496 PRB2P02812 416 aaPredicted RBP8.55□□□□□ -1.04
MSH6-213ENST00000614496 LINC01547P58512 204 aaPredicted RBP8.55□□□□□ -1.04
MSH6-213ENST00000614496 KIAA0087Q14695 138 aa8.55□□□□□ -1.04
MSH6-213ENST00000614496 HELZ2Q9BYK8 2649 aaKnown RBP8.54□□□□□ -1.04
MSH6-213ENST00000614496 RPL37AP8A6NKH3 93 aa8.54□□□□□ -1.04
MSH6-213ENST00000614496 H3BQ85 93 aa8.54□□□□□ -1.04
MSH6-213ENST00000614496 M0R378 163 aa8.54□□□□□ -1.04
MSH6-213ENST00000614496 SYCNQ0VAF6 134 aa8.54□□□□□ -1.04
MSH6-213ENST00000614496 LYPD5Q6UWN5 251 aa8.54□□□□□ -1.04
MSH6-213ENST00000614496 HRCT1Q6UXD1 115 aa8.54□□□□□ -1.04
MSH6-213ENST00000614496 BRK1Q8WUW1 75 aa8.54□□□□□ -1.04
MSH6-213ENST00000614496 C22orf24Q9Y442 160 aa8.54□□□□□ -1.04
MSH6-213ENST00000614496 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.53□□□□□ -1.04
MSH6-213ENST00000614496 Q8N9L7 120 aa8.53□□□□□ -1.04
MSH6-213ENST00000614496 MUC7Q8TAX7 377 aa8.53□□□□□ -1.04
MSH6-213ENST00000614496 C6orf48Q9UBA6 75 aa8.53□□□□□ -1.04
MSH6-213ENST00000614496 UNC79Q9P2D8 2635 aa8.53□□□□□ -1.04
MSH6-213ENST00000614496 DEFB131BA0A096LNP1 70 aa8.53□□□□□ -1.04
MSH6-213ENST00000614496 FLNBO75369 2602 aaKnown RBP8.53□□□□□ -1.04
MSH6-213ENST00000614496 Q6ZTC4 211 aa8.53□□□□□ -1.04
MSH6-213ENST00000614496 PSCAO43653 123 aa8.52□□□□□ -1.04
MSH6-213ENST00000614496 Q6ZRU5 148 aa8.52□□□□□ -1.04
MSH6-213ENST00000614496 RMI2Q96E14 147 aa8.51□□□□□ -1.05
MSH6-213ENST00000614496 TRAV7A0A075B6U4 112 aa8.51□□□□□ -1.05
MSH6-213ENST00000614496 NANOS2P60321 138 aaKnown RBP8.51□□□□□ -1.05
MSH6-213ENST00000614496 Q6ZQT0 140 aa8.51□□□□□ -1.05
MSH6-213ENST00000614496 V9GYY9 64 aa8.51□□□□□ -1.05
MSH6-213ENST00000614496 UBR5O95071 2799 aaPredicted RBP8.51□□□□□ -1.05
MSH6-213ENST00000614496 C11orf45Q8TAV5 145 aa8.51□□□□□ -1.05
MSH6-213ENST00000614496 KRTAP10-3P60369 221 aa8.5□□□□□ -1.05
MSH6-213ENST00000614496 SPATA3Q8NHX4 192 aa8.5□□□□□ -1.05
MSH6-213ENST00000614496 EGFEM1PQ0D2K5 195 aa8.49□□□□□ -1.05
MSH6-213ENST00000614496 TRAV10A0A0B4J240 114 aa8.48□□□□□ -1.05
MSH6-213ENST00000614496 M0R2N4 97 aa8.48□□□□□ -1.05
MSH6-213ENST00000614496 IGKV2-24A0A0C4DH68 120 aa8.48□□□□□ -1.05
MSH6-213ENST00000614496 C2orf48Q96LS8 159 aa8.48□□□□□ -1.05
MSH6-213ENST00000614496 UBE2DNLQ8IWF7 75 aa8.47□□□□□ -1.05
MSH6-213ENST00000614496 ITPR2Q14571 2701 aa8.47□□□□□ -1.05
MSH6-213ENST00000614496 Q8NAQ8 132 aa8.47□□□□□ -1.05
MSH6-213ENST00000614496 APCP25054 2843 aa8.47□□□□□ -1.05
MSH6-213ENST00000614496 A0A0J9YWU9 116 aa8.47□□□□□ -1.05
MSH6-213ENST00000614496 MPLKIPQ8TAP9 179 aa8.47□□□□□ -1.05
MSH6-213ENST00000614496 NDUFC2-KCTD14E9PQ53 114 aa8.46□□□□□ -1.06
MSH6-213ENST00000614496 CYSTM1Q9H1C7 97 aa8.45□□□□□ -1.06
MSH6-213ENST00000614496 LINC00612Q8N6U2 182 aa8.45□□□□□ -1.06
MSH6-213ENST00000614496 Q8NDZ9 215 aa8.45□□□□□ -1.06
MSH6-213ENST00000614496 KRTAP1-1Q07627 177 aa8.44□□□□□ -1.06
MSH6-213ENST00000614496 OBSCN-AS1Q96MR7 158 aa8.44□□□□□ -1.06
MSH6-213ENST00000614496 C4orf26Q17RF5 130 aa8.44□□□□□ -1.06
MSH6-213ENST00000614496 IGLV6-57P01721 117 aa8.43□□□□□ -1.06
MSH6-213ENST00000614496 HIGD2AQ9BW72 106 aa8.43□□□□□ -1.06
MSH6-213ENST00000614496 FAM30AQ9NZY2 134 aa8.43□□□□□ -1.06
MSH6-213ENST00000614496 ESRGQ1W209 222 aa8.42□□□□□ -1.06
MSH6-213ENST00000614496 A0A096LNI7 61 aa8.41□□□□□ -1.06
MSH6-213ENST00000614496 TM2D3Q9BRN9 247 aa8.41□□□□□ -1.06
MSH6-213ENST00000614496 LOC110117498A0A087WWA1 95 aa8.41□□□□□ -1.06
MSH6-213ENST00000614496 PRR4Q16378 134 aa8.4□□□□□ -1.06
MSH6-213ENST00000614496 ELOF1P60002 83 aaKnown RBP8.4□□□□□ -1.07
MSH6-213ENST00000614496 TEP1Q99973 2627 aaKnown RBP8.4□□□□□ -1.07
MSH6-213ENST00000614496 RPS28P62857 69 aaKnown RBP8.4□□□□□ -1.07
MSH6-213ENST00000614496 NIPBLQ6KC79 2804 aaeCLIP8.39□□□□□ -1.072e-6■■□□□ 12.2
MSH6-213ENST00000614496 LINC00167Q96N53 147 aa8.39□□□□□ -1.07
MSH6-213ENST00000614496 CXCL6P80162 114 aa8.39□□□□□ -1.07
MSH6-213ENST00000614496 VPREB1P12018 145 aa8.39□□□□□ -1.07
MSH6-213ENST00000614496 SERP1Q9Y6X1 66 aa8.38□□□□□ -1.07
MSH6-213ENST00000614496 MAST4O15021 2626 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms