RNA–Protein interactions for RNA: ENST00000613647.4

FGFR3-210, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 5 BASIC

Gene FGFR3, Length 4,438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-210ENST00000613647 FRYLO94915 3013 aa13.59□□□□□ -0.23
FGFR3-210ENST00000613647 TEX15Q9BXT5 2789 aa13.59□□□□□ -0.23
FGFR3-210ENST00000613647 SNURFQ9Y675 71 aa13.59□□□□□ -0.23
FGFR3-210ENST00000613647 KRTAP24-1Q3LI83 254 aa13.59□□□□□ -0.23
FGFR3-210ENST00000613647 COL6A3P12111 3177 aa13.58□□□□□ -0.23
FGFR3-210ENST00000613647 C5orf47Q569G3 176 aa13.58□□□□□ -0.24
FGFR3-210ENST00000613647 C1orf137Q5JT78 98 aa13.58□□□□□ -0.24
FGFR3-210ENST00000613647 C10orf25Q5T742 122 aa13.58□□□□□ -0.24
FGFR3-210ENST00000613647 LINC00846Q9NV44 126 aa13.58□□□□□ -0.24
FGFR3-210ENST00000613647 IGKV4-1P06312 121 aa13.58□□□□□ -0.24
FGFR3-210ENST00000613647 FAM236DA0A1B0GTK5 79 aa13.57□□□□□ -0.24
FGFR3-210ENST00000613647 FAM236CP0DP71 79 aa13.57□□□□□ -0.24
FGFR3-210ENST00000613647 FAM19A3Q7Z5A8 133 aa13.57□□□□□ -0.24
FGFR3-210ENST00000613647 Q8NAQ8 132 aa13.56□□□□□ -0.24
FGFR3-210ENST00000613647 LINC00474Q9P2X8 69 aa13.56□□□□□ -0.24
FGFR3-210ENST00000613647 NUPR2A6NF83 97 aa13.56□□□□□ -0.24
FGFR3-210ENST00000613647 SPINK6Q6UWN8 80 aa13.56□□□□□ -0.24
FGFR3-210ENST00000613647 HRCT1Q6UXD1 115 aa13.55□□□□□ -0.24
FGFR3-210ENST00000613647 IGLV9-49A0A0B4J1Y8 123 aa13.55□□□□□ -0.24
FGFR3-210ENST00000613647 REG3GQ6UW15 175 aa13.55□□□□□ -0.24
FGFR3-210ENST00000613647 C7orf33Q8WU49 177 aa13.55□□□□□ -0.24
FGFR3-210ENST00000613647 FAM218AQ96MZ4 157 aa13.55□□□□□ -0.24
FGFR3-210ENST00000613647 LINC01556Q5JQF7 62 aa13.54□□□□□ -0.24
FGFR3-210ENST00000613647 SBSPONQ8IVN8 264 aa13.54□□□□□ -0.24
FGFR3-210ENST00000613647 IGSF10Q6WRI0 2623 aa13.54□□□□□ -0.24
FGFR3-210ENST00000613647 ADGRG4Q8IZF6 3080 aa13.54□□□□□ -0.24
FGFR3-210ENST00000613647 C6orf48Q9UBA6 75 aa13.53□□□□□ -0.24
FGFR3-210ENST00000613647 MRPL55Q7Z7F7 128 aaKnown RBP13.53□□□□□ -0.24
FGFR3-210ENST00000613647 LITAFQ99732 161 aa13.53□□□□□ -0.24
FGFR3-210ENST00000613647 CSNK1G2-AS1Q8NCQ2 148 aa13.52□□□□□ -0.24
FGFR3-210ENST00000613647 ATMQ13315 3056 aa13.52□□□□□ -0.25
FGFR3-210ENST00000613647 CHKB-CPT1BH3BT56 60 aa13.51□□□□□ -0.25
FGFR3-210ENST00000613647 F8WDY8 70 aa13.51□□□□□ -0.25
FGFR3-210ENST00000613647 STAB1Q9NY15 2570 aa13.5□□□□□ -0.25
FGFR3-210ENST00000613647 SPEGQ15772 3267 aa13.49□□□□□ -0.25
FGFR3-210ENST00000613647 FLNCQ14315 2725 aa13.49□□□□□ -0.25
FGFR3-210ENST00000613647 GIG44P09565 113 aaPredicted RBP13.48□□□□□ -0.25
FGFR3-210ENST00000613647 EIF4EBP3O60516 100 aaPredicted RBP13.47□□□□□ -0.25
FGFR3-210ENST00000613647 C19orf73Q9NVV2 129 aa13.47□□□□□ -0.25
FGFR3-210ENST00000613647 ZNF706Q9Y5V0 76 aaPredicted RBP13.46□□□□□ -0.25
FGFR3-210ENST00000613647 Q6ZVQ6 151 aa13.46□□□□□ -0.25
FGFR3-210ENST00000613647 H3BNG1 76 aa13.46□□□□□ -0.26
FGFR3-210ENST00000613647 C22orf24Q9Y442 160 aa13.46□□□□□ -0.26
FGFR3-210ENST00000613647 PRR4Q16378 134 aa13.45□□□□□ -0.26
FGFR3-210ENST00000613647 SETXQ7Z333 2677 aaKnown RBP13.45□□□□□ -0.26
FGFR3-210ENST00000613647 PRYO14603 147 aa13.44□□□□□ -0.26
FGFR3-210ENST00000613647 PRLHP81277 87 aa13.44□□□□□ -0.26
FGFR3-210ENST00000613647 COL6A5A8TX70 2615 aa13.44□□□□□ -0.26
FGFR3-210ENST00000613647 NOTCH1P46531 2555 aa13.44□□□□□ -0.26
FGFR3-210ENST00000613647 ZNF575Q86XF7 245 aa13.43□□□□□ -0.26
FGFR3-210ENST00000613647 KRTAP1-3Q8IUG1 177 aa13.43□□□□□ -0.26
FGFR3-210ENST00000613647 MPLKIPQ8TAP9 179 aa13.43□□□□□ -0.26
FGFR3-210ENST00000613647 UNC79Q9P2D8 2635 aa13.43□□□□□ -0.26
FGFR3-210ENST00000613647 FAM30AQ9NZY2 134 aa13.43□□□□□ -0.26
FGFR3-210ENST00000613647 DMXL2Q8TDJ6 3036 aa13.43□□□□□ -0.26
FGFR3-210ENST00000613647 NDUFC1O43677 76 aa13.42□□□□□ -0.26
FGFR3-210ENST00000613647 GCN1Q92616 2671 aaKnown RBP13.42□□□□□ -0.26
FGFR3-210ENST00000613647 TRAV7A0A075B6U4 112 aa13.42□□□□□ -0.26
FGFR3-210ENST00000613647 KALRNO60229 2985 aa13.42□□□□□ -0.26
FGFR3-210ENST00000613647 UBR5O95071 2799 aaPredicted RBP13.41□□□□□ -0.26
FGFR3-210ENST00000613647 COL12A1Q99715 3063 aa13.41□□□□□ -0.26
FGFR3-210ENST00000613647 A0A087WSZ3 146 aa13.41□□□□□ -0.26
FGFR3-210ENST00000613647 Q9BRP9 147 aa13.39□□□□□ -0.27
FGFR3-210ENST00000613647 LINC00167Q96N53 147 aa13.38□□□□□ -0.27
FGFR3-210ENST00000613647 TACC2O95359 2948 aa13.38□□□□□ -0.27
FGFR3-210ENST00000613647 EYSQ5T1H1 3165 aa13.38□□□□□ -0.27
FGFR3-210ENST00000613647 TRBV7-7A0A0K0K1E9 115 aa13.38□□□□□ -0.27
FGFR3-210ENST00000613647 LINC01547P58512 204 aaPredicted RBP13.38□□□□□ -0.27
FGFR3-210ENST00000613647 KRTAP10-3P60369 221 aa13.37□□□□□ -0.27
FGFR3-210ENST00000613647 DEFB116Q30KQ4 102 aa13.36□□□□□ -0.27
FGFR3-210ENST00000613647 IGLV5-52A0A0A0MRZ9 124 aa13.35□□□□□ -0.27
FGFR3-210ENST00000613647 KIAA0087Q14695 138 aa13.35□□□□□ -0.27
FGFR3-210ENST00000613647 SPATA3Q8NHX4 192 aa13.35□□□□□ -0.27
FGFR3-210ENST00000613647 BRK1Q8WUW1 75 aa13.33□□□□□ -0.27
FGFR3-210ENST00000613647 Q8N9L7 120 aa13.33□□□□□ -0.28
FGFR3-210ENST00000613647 LINC00588Q9Y4M8 146 aa13.33□□□□□ -0.28
FGFR3-210ENST00000613647 SMCR5Q8TEV8 140 aa13.33□□□□□ -0.28
FGFR3-210ENST00000613647 KRTAP1-1Q07627 177 aa13.32□□□□□ -0.28
FGFR3-210ENST00000613647 NHLRC4P0CG21 123 aaPredicted RBP13.31□□□□□ -0.28
FGFR3-210ENST00000613647 MDFIQ99750 246 aa13.31□□□□□ -0.28
FGFR3-210ENST00000613647 ZZEF1O43149 2961 aa13.31□□□□□ -0.28
FGFR3-210ENST00000613647 NBEAL2Q6ZNJ1 2754 aa13.3□□□□□ -0.28
FGFR3-210ENST00000613647 C1orf134Q5TEV5 83 aa13.3□□□□□ -0.28
FGFR3-210ENST00000613647 LINC00208Q96KT6 92 aa13.29□□□□□ -0.28
FGFR3-210ENST00000613647 CFAP47Q6ZTR5 3102 aa13.29□□□□□ -0.28
FGFR3-210ENST00000613647 REV3LO60673 3130 aa13.29□□□□□ -0.28
FGFR3-210ENST00000613647 CIRBP-AS1Q8TBR5 109 aa13.28□□□□□ -0.28
FGFR3-210ENST00000613647 ELOF1P60002 83 aaKnown RBP13.28□□□□□ -0.28
FGFR3-210ENST00000613647 ATP5EP56381 51 aaPredicted RBP13.27□□□□□ -0.29
FGFR3-210ENST00000613647 Q6ZRP5 223 aa13.26□□□□□ -0.29
FGFR3-210ENST00000613647 LINC00612Q8N6U2 182 aa13.25□□□□□ -0.29
FGFR3-210ENST00000613647 GVQW2A0A096LPI5 108 aaPredicted RBP13.25□□□□□ -0.29
FGFR3-210ENST00000613647 CASC2Q6XLA1 102 aa13.24□□□□□ -0.29
FGFR3-210ENST00000613647 KRTAP10-11P60412 298 aa13.24□□□□□ -0.29
FGFR3-210ENST00000613647 ITPR1Q14643 2758 aa13.24□□□□□ -0.29
FGFR3-210ENST00000613647 CXCL6P80162 114 aa13.23□□□□□ -0.29
FGFR3-210ENST00000613647 TRBV7-6A0A0J9YX20 115 aa13.22□□□□□ -0.29
FGFR3-210ENST00000613647 VPREB1P12018 145 aa13.22□□□□□ -0.29
FGFR3-210ENST00000613647 DNAH10OSP0CZ25 163 aa13.22□□□□□ -0.29
FGFR3-210ENST00000613647 PRR34Q9NV39 138 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms