RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 COX6CP09669 75 aa13.1□□□□□ -0.31
SRRM3-205ENST00000612155 UPK3BQ9BT76 320 aa13.1□□□□□ -0.31
SRRM3-205ENST00000612155 MALP21145 153 aa13.1□□□□□ -0.31
SRRM3-205ENST00000612155 DNAH10Q8IVF4 4471 aa13.09□□□□□ -0.31
SRRM3-205ENST00000612155 M0QXV9 152 aa13.09□□□□□ -0.31
SRRM3-205ENST00000612155 M0R2N4 97 aa13.09□□□□□ -0.31
SRRM3-205ENST00000612155 C6orf223Q8N319 242 aa13.09□□□□□ -0.31
SRRM3-205ENST00000612155 C9orf116Q5BN46 136 aaPredicted RBP13.08□□□□□ -0.31
SRRM3-205ENST00000612155 LINC01600Q96MT4 127 aa13.08□□□□□ -0.31
SRRM3-205ENST00000612155 KRTAP1-5Q9BYS1 174 aa13.08□□□□□ -0.31
SRRM3-205ENST00000612155 LINC00526Q96FQ7 95 aa13.08□□□□□ -0.32
SRRM3-205ENST00000612155 TRBV10-2A0A0K0K1G8 114 aa13.07□□□□□ -0.32
SRRM3-205ENST00000612155 C10orf25Q5T742 122 aa13.07□□□□□ -0.32
SRRM3-205ENST00000612155 DNAH10OSP0CZ25 163 aa13.06□□□□□ -0.32
SRRM3-205ENST00000612155 UBE2WQ96B02 151 aa13.06□□□□□ -0.32
SRRM3-205ENST00000612155 TRAV13-2A0A0B4J235 113 aa13.05□□□□□ -0.32
SRRM3-205ENST00000612155 PPDPFLQ8WWR9 84 aa13.05□□□□□ -0.32
SRRM3-205ENST00000612155 CRPP02741 224 aa13.05□□□□□ -0.32
SRRM3-205ENST00000612155 LINC01556Q5JQF7 62 aa13.05□□□□□ -0.32
SRRM3-205ENST00000612155 KRTAP26-1Q6PEX3 210 aa13.04□□□□□ -0.32
SRRM3-205ENST00000612155 FAM218AQ96MZ4 157 aa13.04□□□□□ -0.32
SRRM3-205ENST00000612155 DNAH2Q9P225 4427 aa13.04□□□□□ -0.32
SRRM3-205ENST00000612155 UNQ6190/PRO20217Q6UXQ8 127 aa13.04□□□□□ -0.32
SRRM3-205ENST00000612155 B5MCH6 92 aa13.03□□□□□ -0.32
SRRM3-205ENST00000612155 CXCL5P42830 114 aa13.03□□□□□ -0.32
SRRM3-205ENST00000612155 RPL28P46779 137 aaKnown RBP13.03□□□□□ -0.32
SRRM3-205ENST00000612155 SPAG11BQ08648 103 aa13.03□□□□□ -0.32
SRRM3-205ENST00000612155 SMIM11BQ8TCY0 68 aa13.02□□□□□ -0.33
SRRM3-205ENST00000612155 NTN5Q8WTR8 489 aaPredicted RBP13.02□□□□□ -0.33
SRRM3-205ENST00000612155 Q9HAA7 133 aa13.02□□□□□ -0.33
SRRM3-205ENST00000612155 PRR3P79522 188 aaKnown RBP13.01□□□□□ -0.33
SRRM3-205ENST00000612155 Q8NDZ9 215 aa13.01□□□□□ -0.33
SRRM3-205ENST00000612155 ANAPC13Q9BS18 74 aa13□□□□□ -0.33
SRRM3-205ENST00000612155 NBDYA0A0U1RRE5 68 aa13□□□□□ -0.33
SRRM3-205ENST00000612155 COX17Q14061 63 aa13□□□□□ -0.33
SRRM3-205ENST00000612155 TRAV8-4A0A0B4J246 113 aa12.98□□□□□ -0.33
SRRM3-205ENST00000612155 DNAH6Q9C0G6 4158 aa12.98□□□□□ -0.33
SRRM3-205ENST00000612155 TEX49A0A1B0GTD5 131 aa12.98□□□□□ -0.33
SRRM3-205ENST00000612155 H3BT86 120 aa12.97□□□□□ -0.33
SRRM3-205ENST00000612155 CDIP1Q9H305 208 aa12.97□□□□□ -0.33
SRRM3-205ENST00000612155 RYR2Q92736 4967 aa12.97□□□□□ -0.33
SRRM3-205ENST00000612155 LCE6AA0A183 80 aa12.96□□□□□ -0.33
SRRM3-205ENST00000612155 OR13C6PQ8NH95 151 aa12.94□□□□□ -0.34
SRRM3-205ENST00000612155 C22orf24Q9Y442 160 aa12.94□□□□□ -0.34
SRRM3-205ENST00000612155 TRACP01848 142 aa12.93□□□□□ -0.34
SRRM3-205ENST00000612155 C6orf48Q9UBA6 75 aa12.93□□□□□ -0.34
SRRM3-205ENST00000612155 A0A087WYN8 130 aa12.93□□□□□ -0.34
SRRM3-205ENST00000612155 NDUFC2O95298 119 aa12.92□□□□□ -0.34
SRRM3-205ENST00000612155 HIGD2BQ4VC39 106 aa12.92□□□□□ -0.34
SRRM3-205ENST00000612155 Q6ZR54 194 aa12.92□□□□□ -0.34
SRRM3-205ENST00000612155 RYR3Q15413 4870 aa12.92□□□□□ -0.34
SRRM3-205ENST00000612155 IGKV2D-24A0A075B6R9 120 aa12.91□□□□□ -0.34
SRRM3-205ENST00000612155 C15orf56Q8N910 161 aa12.91□□□□□ -0.34
SRRM3-205ENST00000612155 GVQW2A0A096LPI5 108 aaPredicted RBP12.91□□□□□ -0.34
SRRM3-205ENST00000612155 TTC32Q5I0X7 151 aa12.9□□□□□ -0.34
SRRM3-205ENST00000612155 FRAS1Q86XX4 4008 aa12.9□□□□□ -0.34
SRRM3-205ENST00000612155 NCR3O14931 201 aa12.88□□□□□ -0.35
SRRM3-205ENST00000612155 BAALC-AS2P0C853 105 aa12.87□□□□□ -0.35
SRRM3-205ENST00000612155 C1orf43Q9BWL3 253 aa12.86□□□□□ -0.35
SRRM3-205ENST00000612155 H0YGX0 51 aa12.85□□□□□ -0.35
SRRM3-205ENST00000612155 F8WDY8 70 aa12.84□□□□□ -0.35
SRRM3-205ENST00000612155 ZNF561-AS1K7EIQ3 104 aa12.84□□□□□ -0.35
SRRM3-205ENST00000612155 LECT2O14960 151 aa12.84□□□□□ -0.35
SRRM3-205ENST00000612155 Q6ZRU5 148 aa12.84□□□□□ -0.35
SRRM3-205ENST00000612155 XGP55808 180 aa12.83□□□□□ -0.36
SRRM3-205ENST00000612155 XAGE1AQ9HD64 81 aa12.83□□□□□ -0.36
SRRM3-205ENST00000612155 CAMK2N2Q96S95 79 aa12.83□□□□□ -0.36
SRRM3-205ENST00000612155 DNAH17Q9UFH2 4485 aa12.82□□□□□ -0.36
SRRM3-205ENST00000612155 C1orf134Q5TEV5 83 aa12.82□□□□□ -0.36
SRRM3-205ENST00000612155 Q6ZRN7 208 aaPredicted RBP12.82□□□□□ -0.36
SRRM3-205ENST00000612155 TMEM126AQ9H061 195 aa12.82□□□□□ -0.36
SRRM3-205ENST00000612155 PSCAO43653 123 aa12.81□□□□□ -0.36
SRRM3-205ENST00000612155 MT-ATP8P03928 68 aa12.81□□□□□ -0.36
SRRM3-205ENST00000612155 SLPIP03973 132 aa12.8□□□□□ -0.36
SRRM3-205ENST00000612155 C9orf129Q5T035 196 aaKnown RBP12.79□□□□□ -0.36
SRRM3-205ENST00000612155 C2orf48Q96LS8 159 aa12.79□□□□□ -0.36
SRRM3-205ENST00000612155 FAT2Q9NYQ8 4349 aa12.79□□□□□ -0.36
SRRM3-205ENST00000612155 RPL18AQ02543 176 aaKnown RBP12.78□□□□□ -0.36
SRRM3-205ENST00000612155 RTL8CO15255 209 aa12.77□□□□□ -0.36
SRRM3-205ENST00000612155 IGLV6-57P01721 117 aa12.77□□□□□ -0.36
SRRM3-205ENST00000612155 RMI2Q96E14 147 aa12.77□□□□□ -0.37
SRRM3-205ENST00000612155 C6orf99Q4VX62 202 aa12.76□□□□□ -0.37
SRRM3-205ENST00000612155 S100A7L2Q5SY68 101 aa12.76□□□□□ -0.37
SRRM3-205ENST00000612155 DNAL4O96015 105 aa12.75□□□□□ -0.37
SRRM3-205ENST00000612155 LINC00167Q96N53 147 aa12.74□□□□□ -0.37
SRRM3-205ENST00000612155 CCDC179H3BU77 68 aa12.74□□□□□ -0.37
SRRM3-205ENST00000612155 TNP2Q05952 138 aa12.73□□□□□ -0.37
SRRM3-205ENST00000612155 VPREB1P12018 145 aa12.73□□□□□ -0.37
SRRM3-205ENST00000612155 FUSP35637 526 aaKnown RBP eCLIP12.73□□□□□ -0.37
SRRM3-205ENST00000612155 Q6ZRP5 223 aa12.73□□□□□ -0.37
SRRM3-205ENST00000612155 TRBV10-3A0A0K0K1G6 114 aa12.72□□□□□ -0.37
SRRM3-205ENST00000612155 USP17L23D6RBM5 183 aa12.72□□□□□ -0.37
SRRM3-205ENST00000612155 NDUFC2-KCTD14E9PQ53 114 aa12.72□□□□□ -0.37
SRRM3-205ENST00000612155 Q8N814 137 aa12.72□□□□□ -0.37
SRRM3-205ENST00000612155 NDUFV3P56181 108 aaKnown RBP12.71□□□□□ -0.37
SRRM3-205ENST00000612155 SYCNQ0VAF6 134 aa12.71□□□□□ -0.37
SRRM3-205ENST00000612155 DNAH11Q96DT5 4516 aa12.71□□□□□ -0.38
SRRM3-205ENST00000612155 LRCOL1A6NCL2 159 aa12.7□□□□□ -0.38
SRRM3-205ENST00000612155 GAGE2EQ4V326 116 aa12.7□□□□□ -0.38
SRRM3-205ENST00000612155 GAGE2DQ9UEU5 116 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms