RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 IGKV2D-28P01615 120 aa4.39□□□□□ -1.71
SNX13-213ENST00000611725 SDIM1Q6ZPB5 146 aa4.39□□□□□ -1.71
SNX13-213ENST00000611725 RELNP78509 3460 aa4.39□□□□□ -1.71
SNX13-213ENST00000611725 LYPD5Q6UWN5 251 aa4.39□□□□□ -1.71
SNX13-213ENST00000611725 Q8NAQ8 132 aa4.39□□□□□ -1.71
SNX13-213ENST00000611725 Q8N3U1 123 aa4.39□□□□□ -1.71
SNX13-213ENST00000611725 TRBV10-3A0A0K0K1G6 114 aa4.38□□□□□ -1.71
SNX13-213ENST00000611725 F8WEM9 126 aa4.38□□□□□ -1.71
SNX13-213ENST00000611725 ETDCA0A1B0GVM5 59 aa4.38□□□□□ -1.71
SNX13-213ENST00000611725 WFDC10BQ8IUB3 73 aa4.38□□□□□ -1.71
SNX13-213ENST00000611725 TRAV23DV6A0A075B6W5 121 aa4.38□□□□□ -1.71
SNX13-213ENST00000611725 C10orf25Q5T742 122 aa4.38□□□□□ -1.71
SNX13-213ENST00000611725 C6orf223Q8N319 242 aa4.38□□□□□ -1.71
SNX13-213ENST00000611725 Q8N814 137 aa4.38□□□□□ -1.71
SNX13-213ENST00000611725 LAMA5O15230 3695 aa4.38□□□□□ -1.71
SNX13-213ENST00000611725 DMDP11532 3685 aa4.38□□□□□ -1.71
SNX13-213ENST00000611725 SMIM20Q8N5G0 67 aa4.37□□□□□ -1.71
SNX13-213ENST00000611725 USP17L23D6RBM5 183 aa4.37□□□□□ -1.71
SNX13-213ENST00000611725 H3BQ85 93 aa4.37□□□□□ -1.71
SNX13-213ENST00000611725 KRTAP10-3P60369 221 aa4.37□□□□□ -1.71
SNX13-213ENST00000611725 ATP5EP2Q5VTU8 51 aa4.37□□□□□ -1.71
SNX13-213ENST00000611725 PRB2P02812 416 aaPredicted RBP4.37□□□□□ -1.71
SNX13-213ENST00000611725 NANOS2P60321 138 aaKnown RBP4.37□□□□□ -1.71
SNX13-213ENST00000611725 KIAA0087Q14695 138 aa4.37□□□□□ -1.71
SNX13-213ENST00000611725 A0A0J9YWU9 116 aa4.36□□□□□ -1.71
SNX13-213ENST00000611725 M0R378 163 aa4.36□□□□□ -1.71
SNX13-213ENST00000611725 UQCRQO14949 82 aa4.36□□□□□ -1.71
SNX13-213ENST00000611725 TRAV10A0A0B4J240 114 aa4.36□□□□□ -1.71
SNX13-213ENST00000611725 LINC00846Q9NV44 126 aa4.36□□□□□ -1.71
SNX13-213ENST00000611725 CCDC179H3BU77 68 aa4.36□□□□□ -1.71
SNX13-213ENST00000611725 FUSP35637 526 aaKnown RBP eCLIP4.36□□□□□ -1.71
SNX13-213ENST00000611725 DEFB105AQ8NG35 78 aa4.35□□□□□ -1.71
SNX13-213ENST00000611725 A0A087WVE0 104 aa4.35□□□□□ -1.71
SNX13-213ENST00000611725 Q6JHZ5 121 aa4.35□□□□□ -1.71
SNX13-213ENST00000611725 UBE2BP63146 152 aa4.35□□□□□ -1.71
SNX13-213ENST00000611725 NREPQ16612 68 aa4.35□□□□□ -1.71
SNX13-213ENST00000611725 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.35□□□□□ -1.71
SNX13-213ENST00000611725 LINC00575Q6W349 94 aa4.34□□□□□ -1.71
SNX13-213ENST00000611725 NDUFC2-KCTD14E9PQ53 114 aa4.34□□□□□ -1.71
SNX13-213ENST00000611725 ENHOQ6UWT2 76 aa4.34□□□□□ -1.71
SNX13-213ENST00000611725 IGKV2-24A0A0C4DH68 120 aa4.34□□□□□ -1.72
SNX13-213ENST00000611725 SVIPQ8NHG7 77 aa4.34□□□□□ -1.72
SNX13-213ENST00000611725 C2orf48Q96LS8 159 aa4.34□□□□□ -1.72
SNX13-213ENST00000611725 VWFP04275 2813 aa4.34□□□□□ -1.72
SNX13-213ENST00000611725 ASPMQ8IZT6 3477 aa4.33□□□□□ -1.72
SNX13-213ENST00000611725 CCKP06307 115 aa4.33□□□□□ -1.72
SNX13-213ENST00000611725 KRTAP24-1Q3LI83 254 aa4.33□□□□□ -1.72
SNX13-213ENST00000611725 SPATA3Q8NHX4 192 aa4.33□□□□□ -1.72
SNX13-213ENST00000611725 PRR34Q9NV39 138 aa4.33□□□□□ -1.72
SNX13-213ENST00000611725 H3BNG1 76 aa4.33□□□□□ -1.72
SNX13-213ENST00000611725 Q6ZRU5 148 aa4.33□□□□□ -1.72
SNX13-213ENST00000611725 ESRGQ1W209 222 aa4.33□□□□□ -1.72
SNX13-213ENST00000611725 C6orf48Q9UBA6 75 aa4.33□□□□□ -1.72
SNX13-213ENST00000611725 UPK3BQ9BT76 320 aa4.32□□□□□ -1.72
SNX13-213ENST00000611725 SERP2Q8N6R1 65 aa4.32□□□□□ -1.72
SNX13-213ENST00000611725 C20orf197Q8N268 126 aa4.32□□□□□ -1.72
SNX13-213ENST00000611725 TENM1Q9UKZ4 2725 aa4.32□□□□□ -1.72
SNX13-213ENST00000611725 COX7CP15954 63 aa4.32□□□□□ -1.72
SNX13-213ENST00000611725 LINC01556Q5JQF7 62 aa4.32□□□□□ -1.72
SNX13-213ENST00000611725 C3orf22Q8N5N4 141 aa4.32□□□□□ -1.72
SNX13-213ENST00000611725 TENM4Q6N022 2769 aa4.31□□□□□ -1.72
SNX13-213ENST00000611725 HIGD2AQ9BW72 106 aa4.31□□□□□ -1.72
SNX13-213ENST00000611725 WDFY3Q8IZQ1 3526 aa4.3□□□□□ -1.72
SNX13-213ENST00000611725 GVQW2A0A096LPI5 108 aaPredicted RBP4.3□□□□□ -1.72
SNX13-213ENST00000611725 SCXQ7RTU7 201 aa4.3□□□□□ -1.72
SNX13-213ENST00000611725 FAM19A5Q7Z5A7 132 aaPredicted RBP4.3□□□□□ -1.72
SNX13-213ENST00000611725 ZFHX4Q86UP3 3567 aa4.3□□□□□ -1.72
SNX13-213ENST00000611725 BPY2O14599 106 aa4.3□□□□□ -1.72
SNX13-213ENST00000611725 DHRS4-AS1Q9P1J3 65 aa4.29□□□□□ -1.72
SNX13-213ENST00000611725 RPL37AP8A6NKH3 93 aa4.28□□□□□ -1.72
SNX13-213ENST00000611725 FAM19A1Q7Z5A9 133 aa4.28□□□□□ -1.72
SNX13-213ENST00000611725 CRYGAP11844 174 aa4.28□□□□□ -1.72
SNX13-213ENST00000611725 F8WDY8 70 aa4.28□□□□□ -1.72
SNX13-213ENST00000611725 WIPF1O43516 503 aa4.28□□□□□ -1.72
SNX13-213ENST00000611725 C3orf84H3BNL1 204 aa4.28□□□□□ -1.72
SNX13-213ENST00000611725 C7orf33Q8WU49 177 aa4.28□□□□□ -1.72
SNX13-213ENST00000611725 J3KT08 172 aa4.27□□□□□ -1.73
SNX13-213ENST00000611725 IGLV6-57P01721 117 aa4.27□□□□□ -1.73
SNX13-213ENST00000611725 Q6ZVQ6 151 aa4.27□□□□□ -1.73
SNX13-213ENST00000611725 TENM3Q9P273 2699 aa4.27□□□□□ -1.73
SNX13-213ENST00000611725 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.27□□□□□ -1.73
SNX13-213ENST00000611725 SMCR5Q8TEV8 140 aa4.27□□□□□ -1.73
SNX13-213ENST00000611725 VPREB1P12018 145 aa4.27□□□□□ -1.73
SNX13-213ENST00000611725 C22orf24Q9Y442 160 aa4.27□□□□□ -1.73
SNX13-213ENST00000611725 C14orf177Q52M58 125 aa4.27□□□□□ -1.73
SNX13-213ENST00000611725 C9orf129Q5T035 196 aaKnown RBP4.27□□□□□ -1.73
SNX13-213ENST00000611725 LOC107984640A0A0U1RRK4 108 aa4.26□□□□□ -1.73
SNX13-213ENST00000611725 OBSCN-AS1Q96MR7 158 aa4.26□□□□□ -1.73
SNX13-213ENST00000611725 ELOF1P60002 83 aaKnown RBP4.26□□□□□ -1.73
SNX13-213ENST00000611725 PKIGQ9Y2B9 76 aa4.25□□□□□ -1.73
SNX13-213ENST00000611725 KRTAP10-11P60412 298 aa4.25□□□□□ -1.73
SNX13-213ENST00000611725 LINC01547P58512 204 aaPredicted RBP4.25□□□□□ -1.73
SNX13-213ENST00000611725 UBE2AP49459 152 aa4.24□□□□□ -1.73
SNX13-213ENST00000611725 TMEM258P61165 79 aa4.24□□□□□ -1.73
SNX13-213ENST00000611725 OTOGQ6ZRI0 2925 aa4.24□□□□□ -1.73
SNX13-213ENST00000611725 TRBV7-6A0A0J9YX20 115 aa4.24□□□□□ -1.73
SNX13-213ENST00000611725 Q6ZRP5 223 aa4.24□□□□□ -1.73
SNX13-213ENST00000611725 C1orf137Q5JT78 98 aa4.24□□□□□ -1.73
SNX13-213ENST00000611725 Q6ZQT0 140 aa4.24□□□□□ -1.73
SNX13-213ENST00000611725 LINC00588Q9Y4M8 146 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms