RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 CXCL5P42830 114 aa13.88□□□□□ -0.19
CBWD3-207ENST00000611426 BATFQ16520 125 aa13.88□□□□□ -0.19
CBWD3-207ENST00000611426 DPH3Q96FX2 82 aa13.88□□□□□ -0.19
CBWD3-207ENST00000611426 SLPIP03973 132 aa13.87□□□□□ -0.19
CBWD3-207ENST00000611426 PPDPFQ9H3Y8 114 aa13.87□□□□□ -0.19
CBWD3-207ENST00000611426 MALP21145 153 aa13.86□□□□□ -0.19
CBWD3-207ENST00000611426 FXYD2P54710 66 aa13.86□□□□□ -0.19
CBWD3-207ENST00000611426 SRSF9Q13242 221 aaKnown RBP eCLIP13.86□□□□□ -0.19
CBWD3-207ENST00000611426 A6NDN8 102 aa13.85□□□□□ -0.19
CBWD3-207ENST00000611426 PTTG1IPP53801 180 aa13.85□□□□□ -0.19
CBWD3-207ENST00000611426 SERTAD4-AS1Q5TG53 156 aa13.85□□□□□ -0.19
CBWD3-207ENST00000611426 CFAP161Q6P656 301 aa13.85□□□□□ -0.19
CBWD3-207ENST00000611426 TOMM7Q9P0U1 55 aa13.85□□□□□ -0.19
CBWD3-207ENST00000611426 PRSS2P07478 247 aa13.84□□□□□ -0.19
CBWD3-207ENST00000611426 CIRBPQ14011 172 aaKnown RBP13.84□□□□□ -0.19
CBWD3-207ENST00000611426 A0A1B0GWB2 263 aa13.83□□□□□ -0.19
CBWD3-207ENST00000611426 C6orf226Q5I0X4 101 aa13.83□□□□□ -0.19
CBWD3-207ENST00000611426 C15orf56Q8N910 161 aa13.83□□□□□ -0.19
CBWD3-207ENST00000611426 IFITM1P13164 125 aa13.83□□□□□ -0.2
CBWD3-207ENST00000611426 TMEM238LA0A1B0GVL6 79 aa13.82□□□□□ -0.2
CBWD3-207ENST00000611426 A6NJY4 79 aa13.82□□□□□ -0.2
CBWD3-207ENST00000611426 CHTF8P0CG12 524 aa13.82□□□□□ -0.2
CBWD3-207ENST00000611426 ADAMTSL4-AS1Q5T5F5 129 aa13.82□□□□□ -0.2
CBWD3-207ENST00000611426 A0A087WYN8 130 aa13.8□□□□□ -0.2
CBWD3-207ENST00000611426 HMCN2Q8NDA2 5059 aa13.79□□□□□ -0.2
CBWD3-207ENST00000611426 SPAG11BQ08648 103 aa13.79□□□□□ -0.2
CBWD3-207ENST00000611426 HIGD2BQ4VC39 106 aa13.79□□□□□ -0.2
CBWD3-207ENST00000611426 SPACA4Q8TDM5 124 aa13.79□□□□□ -0.2
CBWD3-207ENST00000611426 COPS9Q8WXC6 57 aa13.79□□□□□ -0.2
CBWD3-207ENST00000611426 F8WDY8 70 aa13.78□□□□□ -0.2
CBWD3-207ENST00000611426 CKS1BP61024 79 aa13.78□□□□□ -0.2
CBWD3-207ENST00000611426 RPL24P83731 157 aaKnown RBP13.78□□□□□ -0.2
CBWD3-207ENST00000611426 MEIG1Q5JSS6 88 aa13.77□□□□□ -0.21
CBWD3-207ENST00000611426 GVQW2A0A096LPI5 108 aaPredicted RBP13.76□□□□□ -0.21
CBWD3-207ENST00000611426 TAX1BP3O14907 124 aa13.76□□□□□ -0.21
CBWD3-207ENST00000611426 MUSTN1Q8IVN3 82 aa13.76□□□□□ -0.21
CBWD3-207ENST00000611426 SMIM13P0DJ93 91 aa13.75□□□□□ -0.21
CBWD3-207ENST00000611426 COX17Q14061 63 aa13.75□□□□□ -0.21
CBWD3-207ENST00000611426 ERG28Q9UKR5 140 aa13.75□□□□□ -0.21
CBWD3-207ENST00000611426 C2orf82Q6UX34 121 aa13.74□□□□□ -0.21
CBWD3-207ENST00000611426 C2orf48Q96LS8 159 aa13.74□□□□□ -0.21
CBWD3-207ENST00000611426 NHP2Q9NX24 153 aaKnown RBP13.74□□□□□ -0.21
CBWD3-207ENST00000611426 PLAC8Q9NZF1 115 aa13.74□□□□□ -0.21
CBWD3-207ENST00000611426 LINC00308Q8TCZ7 52 aa13.73□□□□□ -0.21
CBWD3-207ENST00000611426 Q6ZRU5 148 aa13.72□□□□□ -0.21
CBWD3-207ENST00000611426 IGKV2-24A0A0C4DH68 120 aa13.71□□□□□ -0.21
CBWD3-207ENST00000611426 A4D1N5 150 aa13.71□□□□□ -0.21
CBWD3-207ENST00000611426 A0A0B4J2C4 111 aa13.71□□□□□ -0.22
CBWD3-207ENST00000611426 LOC107984156A0A0G2JMH3 177 aa13.71□□□□□ -0.22
CBWD3-207ENST00000611426 ARL17AQ8IVW1 177 aa13.71□□□□□ -0.22
CBWD3-207ENST00000611426 C7orf33Q8WU49 177 aa13.71□□□□□ -0.22
CBWD3-207ENST00000611426 MIR7-3HGQ8N6C7 128 aa13.7□□□□□ -0.22
CBWD3-207ENST00000611426 PLA2G2DQ9UNK4 145 aa13.7□□□□□ -0.22
CBWD3-207ENST00000611426 TRBV30A0A0K0K1B3 111 aa13.69□□□□□ -0.22
CBWD3-207ENST00000611426 ZNF561-AS1K7EIQ3 104 aa13.69□□□□□ -0.22
CBWD3-207ENST00000611426 CFC1BP0CG36 223 aa13.69□□□□□ -0.22
CBWD3-207ENST00000611426 CFC1P0CG37 223 aa13.69□□□□□ -0.22
CBWD3-207ENST00000611426 SOSTDC1Q6X4U4 206 aa13.69□□□□□ -0.22
CBWD3-207ENST00000611426 DAND5Q8N907 189 aa13.69□□□□□ -0.22
CBWD3-207ENST00000611426 K7ERJ3 54 aa13.68□□□□□ -0.22
CBWD3-207ENST00000611426 EIF4EBP3O60516 100 aaPredicted RBP13.68□□□□□ -0.22
CBWD3-207ENST00000611426 LINC00158P58513 81 aa13.68□□□□□ -0.22
CBWD3-207ENST00000611426 UNQ6190/PRO20217Q6UXQ8 127 aa13.68□□□□□ -0.22
CBWD3-207ENST00000611426 C9orf118A6NHY6 69 aa13.67□□□□□ -0.22
CBWD3-207ENST00000611426 C10orf25Q5T742 122 aa13.67□□□□□ -0.22
CBWD3-207ENST00000611426 A0A1B0GV90 55 aa13.66□□□□□ -0.22
CBWD3-207ENST00000611426 LINC00526Q96FQ7 95 aa13.66□□□□□ -0.22
CBWD3-207ENST00000611426 UBR4Q5T4S7 5183 aa13.65□□□□□ -0.22
CBWD3-207ENST00000611426 A0A096LNI7 61 aa13.65□□□□□ -0.22
CBWD3-207ENST00000611426 A0A0U1RRA0 63 aa13.65□□□□□ -0.22
CBWD3-207ENST00000611426 MT1HL1P0DM35 61 aa13.65□□□□□ -0.22
CBWD3-207ENST00000611426 PFN2P35080 140 aa13.64□□□□□ -0.23
CBWD3-207ENST00000611426 CAMK2N2Q96S95 79 aa13.64□□□□□ -0.23
CBWD3-207ENST00000611426 LINC00474Q9P2X8 69 aa13.64□□□□□ -0.23
CBWD3-207ENST00000611426 C6orf48Q9UBA6 75 aa13.64□□□□□ -0.23
CBWD3-207ENST00000611426 PKIGQ9Y2B9 76 aa13.64□□□□□ -0.23
CBWD3-207ENST00000611426 RNF151Q2KHN1 245 aa13.63□□□□□ -0.23
CBWD3-207ENST00000611426 CARD19Q96LW7 228 aa13.63□□□□□ -0.23
CBWD3-207ENST00000611426 PRO1854Q9UHT4 67 aa13.63□□□□□ -0.23
CBWD3-207ENST00000611426 NPC2P61916 151 aa13.6□□□□□ -0.23
CBWD3-207ENST00000611426 SYCNQ0VAF6 134 aa13.6□□□□□ -0.23
CBWD3-207ENST00000611426 RAB37Q96AX2 223 aa13.6□□□□□ -0.23
CBWD3-207ENST00000611426 PRR3P79522 188 aaKnown RBP13.59□□□□□ -0.23
CBWD3-207ENST00000611426 C9orf116Q5BN46 136 aaPredicted RBP13.59□□□□□ -0.23
CBWD3-207ENST00000611426 SND1-IT1Q9HBX3 110 aa13.58□□□□□ -0.24
CBWD3-207ENST00000611426 TNXBP22105 4242 aa13.57□□□□□ -0.24
CBWD3-207ENST00000611426 H3BUT2 72 aa13.57□□□□□ -0.24
CBWD3-207ENST00000611426 NDUFC2O95298 119 aa13.57□□□□□ -0.24
CBWD3-207ENST00000611426 A0A1W2PPM0 123 aa13.56□□□□□ -0.24
CBWD3-207ENST00000611426 TSPAN13O95857 204 aa13.56□□□□□ -0.24
CBWD3-207ENST00000611426 TLX1NBP0CAT3 122 aa13.55□□□□□ -0.24
CBWD3-207ENST00000611426 NDUFC2-KCTD14E9PQ53 114 aa13.54□□□□□ -0.24
CBWD3-207ENST00000611426 IGKV2-28A0A075B6P5 120 aa13.53□□□□□ -0.24
CBWD3-207ENST00000611426 LOC107984640A0A0U1RRK4 108 aa13.53□□□□□ -0.24
CBWD3-207ENST00000611426 IGKV2D-28P01615 120 aa13.53□□□□□ -0.24
CBWD3-207ENST00000611426 GAGE2BQ13066 116 aa13.53□□□□□ -0.24
CBWD3-207ENST00000611426 TRAV13-2A0A0B4J235 113 aa13.52□□□□□ -0.25
CBWD3-207ENST00000611426 FABP2P12104 132 aa13.51□□□□□ -0.25
CBWD3-207ENST00000611426 LINC01600Q96MT4 127 aa13.5□□□□□ -0.25
CBWD3-207ENST00000611426 Q6ZRP5 223 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms