RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 PRB2P02812 416 aaPredicted RBP11.1□□□□□ -0.63
RTN1-209ENST00000611068 IGHV4-30-4P0DP06 118 aa11.1□□□□□ -0.63
RTN1-209ENST00000611068 LOC100131303A0A0U1RQF7 123 aa11.09□□□□□ -0.63
RTN1-209ENST00000611068 IGLV5-45A0A087WSX0 123 aa11.08□□□□□ -0.64
RTN1-209ENST00000611068 TRAV10A0A0B4J240 114 aa11.08□□□□□ -0.64
RTN1-209ENST00000611068 TRAV13-2A0A0B4J235 113 aa11.08□□□□□ -0.64
RTN1-209ENST00000611068 COPS9Q8WXC6 57 aa11.08□□□□□ -0.64
RTN1-209ENST00000611068 X6R8D5 127 aa11.08□□□□□ -0.64
RTN1-209ENST00000611068 ANK2Q01484 3957 aa11.08□□□□□ -0.64
RTN1-209ENST00000611068 ATP5EP2Q5VTU8 51 aa11.07□□□□□ -0.64
RTN1-209ENST00000611068 RPL36AP83881 106 aaKnown RBP11.06□□□□□ -0.64
RTN1-209ENST00000611068 RPL36ALQ969Q0 106 aaKnown RBP11.06□□□□□ -0.64
RTN1-209ENST00000611068 OVOL2Q9BRP0 275 aa11.06□□□□□ -0.64
RTN1-209ENST00000611068 NBEAL1Q6ZS30 2694 aa11.06□□□□□ -0.64
RTN1-209ENST00000611068 SMIM1B2RUZ4 78 aa11.06□□□□□ -0.64
RTN1-209ENST00000611068 S100A7L2Q5SY68 101 aa11.05□□□□□ -0.64
RTN1-209ENST00000611068 TRGV4A0A0C4DH28 118 aa11.05□□□□□ -0.64
RTN1-209ENST00000611068 LINC00242Q5T6M2 205 aa11.05□□□□□ -0.64
RTN1-209ENST00000611068 RETNQ9HD89 108 aa11.05□□□□□ -0.64
RTN1-209ENST00000611068 SND1-IT1Q9HBX3 110 aa11.03□□□□□ -0.64
RTN1-209ENST00000611068 ORMDL1Q9P0S3 153 aa11.03□□□□□ -0.64
RTN1-209ENST00000611068 CMYA5Q8N3K9 4069 aa11.03□□□□□ -0.64
RTN1-209ENST00000611068 MGAM2Q2M2H8 2515 aa11.03□□□□□ -0.64
RTN1-209ENST00000611068 K7EQD1 137 aa11.02□□□□□ -0.65
RTN1-209ENST00000611068 APOC4P55056 127 aa11.02□□□□□ -0.65
RTN1-209ENST00000611068 A0A096LPF7 62 aa11.02□□□□□ -0.65
RTN1-209ENST00000611068 IGHV4-28A0A0C4DH34 117 aa11.02□□□□□ -0.65
RTN1-209ENST00000611068 H0YGX0 51 aa11.02□□□□□ -0.65
RTN1-209ENST00000611068 PMAIP1Q13794 54 aa11.02□□□□□ -0.65
RTN1-209ENST00000611068 TRBV10-3A0A0K0K1G6 114 aa11.01□□□□□ -0.65
RTN1-209ENST00000611068 CELA1Q9UNI1 258 aa11□□□□□ -0.65
RTN1-209ENST00000611068 TENM3Q9P273 2699 aa11□□□□□ -0.65
RTN1-209ENST00000611068 UBL5Q9BZL1 73 aa11□□□□□ -0.65
RTN1-209ENST00000611068 MDFIQ99750 246 aa10.99□□□□□ -0.65
RTN1-209ENST00000611068 HTN3P15516 51 aa10.99□□□□□ -0.65
RTN1-209ENST00000611068 DGAT2L7PQ6IED9 249 aa10.99□□□□□ -0.65
RTN1-209ENST00000611068 TM2D3Q9BRN9 247 aa10.98□□□□□ -0.65
RTN1-209ENST00000611068 NTM-AS1Q6ZSK4 140 aa10.97□□□□□ -0.65
RTN1-209ENST00000611068 C6orf226Q5I0X4 101 aa10.97□□□□□ -0.65
RTN1-209ENST00000611068 A0A087WZ39 114 aa10.96□□□□□ -0.66
RTN1-209ENST00000611068 BCE1O60756 84 aa10.95□□□□□ -0.66
RTN1-209ENST00000611068 CCL18P55774 89 aa10.95□□□□□ -0.66
RTN1-209ENST00000611068 M0R2N4 97 aa10.94□□□□□ -0.66
RTN1-209ENST00000611068 MIFP14174 115 aa10.94□□□□□ -0.66
RTN1-209ENST00000611068 Q8NAQ8 132 aa10.94□□□□□ -0.66
RTN1-209ENST00000611068 LINC01547P58512 204 aaPredicted RBP10.94□□□□□ -0.66
RTN1-209ENST00000611068 TRBV7-4A0A0J9YYF1 115 aa10.93□□□□□ -0.66
RTN1-209ENST00000611068 HAMPP81172 84 aa10.93□□□□□ -0.66
RTN1-209ENST00000611068 JMJD7-PLA2G4BH0Y9G9 81 aa10.93□□□□□ -0.66
RTN1-209ENST00000611068 GYPEP15421 78 aa10.93□□□□□ -0.66
RTN1-209ENST00000611068 DAD1P61803 113 aa10.92□□□□□ -0.66
RTN1-209ENST00000611068 LINC00158P58513 81 aa10.92□□□□□ -0.66
RTN1-209ENST00000611068 TRBV10-1A0A0K0K1A3 114 aa10.91□□□□□ -0.66
RTN1-209ENST00000611068 TRBV6-4A0A1B0GX49 114 aa10.91□□□□□ -0.66
RTN1-209ENST00000611068 NDUFC1O43677 76 aa10.91□□□□□ -0.66
RTN1-209ENST00000611068 EGFEM1PQ0D2K5 195 aa10.91□□□□□ -0.66
RTN1-209ENST00000611068 IGKV3OR2-268A0A0C4DH90 116 aa10.91□□□□□ -0.66
RTN1-209ENST00000611068 IBA57-AS1B1ANH7 110 aa10.91□□□□□ -0.66
RTN1-209ENST00000611068 ATP5EP56381 51 aaPredicted RBP10.91□□□□□ -0.66
RTN1-209ENST00000611068 PRR15Q8IV56 129 aa10.9□□□□□ -0.66
RTN1-209ENST00000611068 Q8N3U1 123 aa10.89□□□□□ -0.67
RTN1-209ENST00000611068 TOMM7Q9P0U1 55 aa10.89□□□□□ -0.67
RTN1-209ENST00000611068 PAX4O43316 350 aa10.89□□□□□ -0.67
RTN1-209ENST00000611068 ESRGQ1W209 222 aa10.88□□□□□ -0.67
RTN1-209ENST00000611068 LINC00612Q8N6U2 182 aa10.88□□□□□ -0.67
RTN1-209ENST00000611068 Q6ZRU5 148 aa10.88□□□□□ -0.67
RTN1-209ENST00000611068 LYRM9A8MSI8 78 aa10.87□□□□□ -0.67
RTN1-209ENST00000611068 UBE2L6O14933 153 aa10.87□□□□□ -0.67
RTN1-209ENST00000611068 LINC00167Q96N53 147 aa10.87□□□□□ -0.67
RTN1-209ENST00000611068 Q6ZVQ6 151 aa10.87□□□□□ -0.67
RTN1-209ENST00000611068 TMEM254Q8TBM7 123 aa10.87□□□□□ -0.67
RTN1-209ENST00000611068 SPART-AS1P0CW21 52 aa10.86□□□□□ -0.67
RTN1-209ENST00000611068 SCXQ7RTU7 201 aa10.86□□□□□ -0.67
RTN1-209ENST00000611068 Q8N814 137 aa10.86□□□□□ -0.67
RTN1-209ENST00000611068 C11orf68Q9H3H3 251 aaKnown RBP10.86□□□□□ -0.67
RTN1-209ENST00000611068 PRO0255Q9UI72 69 aa10.86□□□□□ -0.67
RTN1-209ENST00000611068 FAM19A3Q7Z5A8 133 aa10.85□□□□□ -0.67
RTN1-209ENST00000611068 TMEM256-PLSCR3K7ERE1 68 aa10.85□□□□□ -0.67
RTN1-209ENST00000611068 Q6ZQT0 140 aa10.85□□□□□ -0.67
RTN1-209ENST00000611068 LRCOL1A6NCL2 159 aa10.84□□□□□ -0.67
RTN1-209ENST00000611068 COX7B2Q8TF08 81 aa10.84□□□□□ -0.67
RTN1-209ENST00000611068 NREPQ16612 68 aa10.84□□□□□ -0.67
RTN1-209ENST00000611068 IGLV4-60A0A075B6I1 120 aa10.83□□□□□ -0.68
RTN1-209ENST00000611068 TRBV6-8A0A0A6YYG3 113 aa10.83□□□□□ -0.68
RTN1-209ENST00000611068 A0A0J9YWU9 116 aa10.83□□□□□ -0.68
RTN1-209ENST00000611068 CLPSL2Q6UWE3 100 aa10.82□□□□□ -0.68
RTN1-209ENST00000611068 C6orf223Q8N319 242 aa10.82□□□□□ -0.68
RTN1-209ENST00000611068 PRR3P79522 188 aaKnown RBP10.81□□□□□ -0.68
RTN1-209ENST00000611068 CD164Q04900 197 aa10.81□□□□□ -0.68
RTN1-209ENST00000611068 Q6ZTC4 211 aa10.81□□□□□ -0.68
RTN1-209ENST00000611068 K7EIL1 84 aa10.81□□□□□ -0.68
RTN1-209ENST00000611068 NANOS2P60321 138 aaKnown RBP10.8□□□□□ -0.68
RTN1-209ENST00000611068 CDC42SE2Q9NRR3 84 aa10.8□□□□□ -0.68
RTN1-209ENST00000611068 FUSP35637 526 aaKnown RBP eCLIP10.79□□□□□ -0.68
RTN1-209ENST00000611068 DNAH3Q8TD57 4116 aa10.79□□□□□ -0.68
RTN1-209ENST00000611068 COL7A1Q02388 2944 aa10.78□□□□□ -0.68
RTN1-209ENST00000611068 PRYO14603 147 aa10.77□□□□□ -0.68
RTN1-209ENST00000611068 CXCL6P80162 114 aa10.76□□□□□ -0.69
RTN1-209ENST00000611068 Q6ZRP5 223 aa10.76□□□□□ -0.69
RTN1-209ENST00000611068 BPY2O14599 106 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms