RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 DEFB107AQ8IZN7 70 aa1.49□□□□□ -2.17
SMCHD1-213ENST00000609587 TMEM263Q8WUH6 116 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-213ENST00000609587 OBSCN-AS1Q96MR7 158 aa1.49□□□□□ -2.17
SMCHD1-213ENST00000609587 GNG13Q9P2W3 67 aa1.49□□□□□ -2.17
SMCHD1-213ENST00000609587 CACNA1CQ13936 2221 aa1.49□□□□□ -2.17
SMCHD1-213ENST00000609587 NRAPQ86VF7 1730 aa1.49□□□□□ -2.17
SMCHD1-213ENST00000609587 TRAV21A0A0B4J279 112 aa1.48□□□□□ -2.17
SMCHD1-213ENST00000609587 CTXND1A0A1B0GTU2 59 aa1.48□□□□□ -2.17
SMCHD1-213ENST00000609587 COX17Q14061 63 aa1.48□□□□□ -2.17
SMCHD1-213ENST00000609587 KRTAP21-3Q3LHN1 58 aa1.48□□□□□ -2.17
SMCHD1-213ENST00000609587 C10orf99Q6UWK7 81 aa1.48□□□□□ -2.17
SMCHD1-213ENST00000609587 IQGAP2Q13576 1575 aa1.47□□□□□ -2.17
SMCHD1-213ENST00000609587 F5P12259 2224 aa1.47□□□□□ -2.17
SMCHD1-213ENST00000609587 ANKRD36CQ5JPF3 1778 aa1.47□□□□□ -2.17
SMCHD1-213ENST00000609587 LRRC37A2A6NM11 1700 aa1.47□□□□□ -2.17
SMCHD1-213ENST00000609587 FMN2Q9NZ56 1722 aa1.47□□□□□ -2.17
SMCHD1-213ENST00000609587 TRGV2A0A075B6R0 118 aa1.47□□□□□ -2.17
SMCHD1-213ENST00000609587 A0A096LNT2 108 aa1.47□□□□□ -2.17
SMCHD1-213ENST00000609587 TRAV1-2A0A0B4J238 106 aa1.47□□□□□ -2.17
SMCHD1-213ENST00000609587 LINC00959A0A1B0GUT2 108 aa1.47□□□□□ -2.17
SMCHD1-213ENST00000609587 NDUFB1O75438 58 aa1.47□□□□□ -2.17
SMCHD1-213ENST00000609587 NREPQ16612 68 aa1.47□□□□□ -2.17
SMCHD1-213ENST00000609587 NCBP2-AS2Q69YL0 99 aa1.47□□□□□ -2.17
SMCHD1-213ENST00000609587 ABCA1O95477 2261 aa1.47□□□□□ -2.17
SMCHD1-213ENST00000609587 NFAT5O94916 1531 aa1.46□□□□□ -2.18
SMCHD1-213ENST00000609587 TRBV6-1A0A0K0K1D8 114 aa1.46□□□□□ -2.18
SMCHD1-213ENST00000609587 C10orf113Q5VZT2 155 aa1.46□□□□□ -2.18
SMCHD1-213ENST00000609587 MUC6Q6W4X9 2439 aa1.46□□□□□ -2.18
SMCHD1-213ENST00000609587 G3V318 75 aa1.45□□□□□ -2.18
SMCHD1-213ENST00000609587 CAV3P56539 151 aa1.45□□□□□ -2.18
SMCHD1-213ENST00000609587 SMIM4Q8WVI0 70 aa1.45□□□□□ -2.18
SMCHD1-213ENST00000609587 CCL19Q99731 98 aa1.45□□□□□ -2.18
SMCHD1-213ENST00000609587 SSC5DA1L4H1 1573 aa1.45□□□□□ -2.18
SMCHD1-213ENST00000609587 CDC42BPAQ5VT25 1732 aa1.45□□□□□ -2.18
SMCHD1-213ENST00000609587 Q6ZQY7 126 aa1.43□□□□□ -2.18
SMCHD1-213ENST00000609587 DEFB119Q8N690 84 aa1.43□□□□□ -2.18
SMCHD1-213ENST00000609587 CMC2Q9NRP2 79 aa1.43□□□□□ -2.18
SMCHD1-213ENST00000609587 TRPM2O94759 1503 aa1.43□□□□□ -2.18
SMCHD1-213ENST00000609587 DDX60LQ5H9U9 1706 aaKnown RBP1.43□□□□□ -2.18
SMCHD1-213ENST00000609587 FAM208AQ9UK61 1670 aaKnown RBP1.42□□□□□ -2.18
SMCHD1-213ENST00000609587 ACYP2P14621 99 aa1.42□□□□□ -2.18
SMCHD1-213ENST00000609587 UNQ6190/PRO20217Q6UXQ8 127 aa1.42□□□□□ -2.18
SMCHD1-213ENST00000609587 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.42□□□□□ -2.18
SMCHD1-213ENST00000609587 NMES1Q9C002 83 aa1.42□□□□□ -2.18
SMCHD1-213ENST00000609587 QSER1Q2KHR3 1735 aa1.42□□□□□ -2.18
SMCHD1-213ENST00000609587 ABCC8Q09428 1581 aa1.42□□□□□ -2.18
SMCHD1-213ENST00000609587 E9PCH4 1651 aa1.42□□□□□ -2.18
SMCHD1-213ENST00000609587 TULP4Q9NRJ4 1543 aa1.41□□□□□ -2.18
SMCHD1-213ENST00000609587 GVQW2A0A096LPI5 108 aaPredicted RBP1.41□□□□□ -2.18
SMCHD1-213ENST00000609587 ENHOQ6UWT2 76 aa1.41□□□□□ -2.18
SMCHD1-213ENST00000609587 Q6ZSA8 131 aa1.41□□□□□ -2.18
SMCHD1-213ENST00000609587 PLAC4Q8WY50 150 aa1.41□□□□□ -2.18
SMCHD1-213ENST00000609587 A0A0G2JMZ2 1700 aa1.4□□□□□ -2.18
SMCHD1-213ENST00000609587 CADP27708 2225 aa1.4□□□□□ -2.18
SMCHD1-213ENST00000609587 TOMM5Q8N4H5 51 aa1.4□□□□□ -2.19
SMCHD1-213ENST00000609587 IGIPA6NJ69 53 aa1.39□□□□□ -2.19
SMCHD1-213ENST00000609587 K7EMI3 77 aa1.39□□□□□ -2.19
SMCHD1-213ENST00000609587 DEFB114Q30KQ6 69 aa1.39□□□□□ -2.19
SMCHD1-213ENST00000609587 DEFB112Q30KQ8 113 aa1.39□□□□□ -2.19
SMCHD1-213ENST00000609587 Q6ZRX8 168 aa1.39□□□□□ -2.19
SMCHD1-213ENST00000609587 GAFA1Q96PS6 74 aa1.39□□□□□ -2.19
SMCHD1-213ENST00000609587 ASCC3Q8N3C0 2202 aaKnown RBP1.39□□□□□ -2.19
SMCHD1-213ENST00000609587 TNCP24821 2201 aa1.38□□□□□ -2.19
SMCHD1-213ENST00000609587 A0A1B0GU69 56 aa1.38□□□□□ -2.19
SMCHD1-213ENST00000609587 LY6G6CO95867 125 aa1.38□□□□□ -2.19
SMCHD1-213ENST00000609587 WFDC9Q8NEX5 89 aa1.38□□□□□ -2.19
SMCHD1-213ENST00000609587 SMIM11BQ8TCY0 68 aa1.38□□□□□ -2.19
SMCHD1-213ENST00000609587 KCNQ1DNQ9H478 68 aa1.38□□□□□ -2.19
SMCHD1-213ENST00000609587 BPTFQ12830 3046 aa1.38□□□□□ -2.19
SMCHD1-213ENST00000609587 PLXNB2O15031 1838 aa1.38□□□□□ -2.19
SMCHD1-213ENST00000609587 LRRC37AA6NMS7 1700 aa1.37□□□□□ -2.19
SMCHD1-213ENST00000609587 TECTAO75443 2155 aa1.37□□□□□ -2.19
SMCHD1-213ENST00000609587 ATP7AQ04656 1500 aa1.37□□□□□ -2.19
SMCHD1-213ENST00000609587 CACNA1BQ00975 2339 aa1.37□□□□□ -2.19
SMCHD1-213ENST00000609587 SMIM27A0A1W2PRY6 76 aa1.37□□□□□ -2.19
SMCHD1-213ENST00000609587 NDUFA4O00483 81 aa1.37□□□□□ -2.19
SMCHD1-213ENST00000609587 COX6B1P14854 86 aa1.37□□□□□ -2.19
SMCHD1-213ENST00000609587 COX7BP24311 80 aa1.37□□□□□ -2.19
SMCHD1-213ENST00000609587 ASXL3Q9C0F0 2248 aa1.37□□□□□ -2.19
SMCHD1-213ENST00000609587 LINC01546A6NGU7 62 aa1.36□□□□□ -2.19
SMCHD1-213ENST00000609587 NCR3O14931 201 aa1.36□□□□□ -2.19
SMCHD1-213ENST00000609587 PIN1P1O15428 100 aa1.36□□□□□ -2.19
SMCHD1-213ENST00000609587 RPL37P61927 97 aaKnown RBP1.36□□□□□ -2.19
SMCHD1-213ENST00000609587 LINC00575Q6W349 94 aa1.36□□□□□ -2.19
SMCHD1-213ENST00000609587 UBL5Q9BZL1 73 aa1.36□□□□□ -2.19
SMCHD1-213ENST00000609587 PRH1P02810 166 aa1.35□□□□□ -2.19
SMCHD1-213ENST00000609587 ABRACLQ9P1F3 81 aa1.35□□□□□ -2.19
SMCHD1-213ENST00000609587 DEPDC5O75140 1603 aa1.35□□□□□ -2.19
SMCHD1-213ENST00000609587 ANGP03950 147 aaKnown RBP1.34□□□□□ -2.19
SMCHD1-213ENST00000609587 FCER1GP30273 86 aa1.34□□□□□ -2.19
SMCHD1-213ENST00000609587 SPINK13Q1W4C9 94 aa1.34□□□□□ -2.19
SMCHD1-213ENST00000609587 IQGAP1P46940 1657 aa1.34□□□□□ -2.19
SMCHD1-213ENST00000609587 KIF21BO75037 1637 aa1.33□□□□□ -2.2
SMCHD1-213ENST00000609587 CPSF4LA6NMK7 179 aaKnown RBP1.33□□□□□ -2.2
SMCHD1-213ENST00000609587 ARL14EPLP0DKL9 152 aa1.33□□□□□ -2.2
SMCHD1-213ENST00000609587 KNTC1P50748 2209 aa1.32□□□□□ -2.2
SMCHD1-213ENST00000609587 FLG2Q5D862 2391 aaPredicted RBP1.32□□□□□ -2.2
SMCHD1-213ENST00000609587 ZDBF2Q9HCK1 2354 aa1.32□□□□□ -2.2
SMCHD1-213ENST00000609587 I3L3M4 83 aa1.32□□□□□ -2.2
SMCHD1-213ENST00000609587 LYNX1P0DP58 116 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms