RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 ARPC5O15511 151 aa-0.67□□□□□ -2.52
ITGB5-213ENST00000608945 NDUFA4L2Q9NRX3 87 aa-0.67□□□□□ -2.52
ITGB5-213ENST00000608945 LINC01558Q9Y6Z2 57 aa-0.67□□□□□ -2.52
ITGB5-213ENST00000608945 CDC42BPGQ6DT37 1551 aa-0.67□□□□□ -2.52
ITGB5-213ENST00000608945 XRN1Q8IZH2 1706 aaKnown RBP-0.67□□□□□ -2.52
ITGB5-213ENST00000608945 MBD5Q9P267 1494 aa-0.67□□□□□ -2.52
ITGB5-213ENST00000608945 RAPGEF6Q8TEU7 1601 aa-0.67□□□□□ -2.52
ITGB5-213ENST00000608945 TET3O43151 1660 aa-0.68□□□□□ -2.52
ITGB5-213ENST00000608945 MYOM1P52179 1685 aa-0.68□□□□□ -2.52
ITGB5-213ENST00000608945 A0A0G2JMZ2 1700 aa-0.68□□□□□ -2.52
ITGB5-213ENST00000608945 TRBV7-4A0A0J9YYF1 115 aa-0.68□□□□□ -2.52
ITGB5-213ENST00000608945 COX8AP10176 69 aa-0.68□□□□□ -2.52
ITGB5-213ENST00000608945 SMARCA2P51531 1590 aa-0.68□□□□□ -2.52
ITGB5-213ENST00000608945 DR1Q01658 176 aa-0.68□□□□□ -2.52
ITGB5-213ENST00000608945 SMG6Q86US8 1419 aaKnown RBP-0.68□□□□□ -2.52
ITGB5-213ENST00000608945 ANP32BQ92688 251 aaKnown RBP-0.68□□□□□ -2.52
ITGB5-213ENST00000608945 PFDN5Q99471 154 aa-0.68□□□□□ -2.52
ITGB5-213ENST00000608945 NAA60Q9H7X0 242 aa-0.68□□□□□ -2.52
ITGB5-213ENST00000608945 FAIMQ9NVQ4 179 aa-0.68□□□□□ -2.52
ITGB5-213ENST00000608945 CRIPTQ9P021 101 aa-0.68□□□□□ -2.52
ITGB5-213ENST00000608945 S4R3F8 94 aa-0.68□□□□□ -2.52
ITGB5-213ENST00000608945 RGPD3A6NKT7 1758 aaPredicted RBP-0.68□□□□□ -2.52
ITGB5-213ENST00000608945 RGPD4Q7Z3J3 1758 aa-0.68□□□□□ -2.52
ITGB5-213ENST00000608945 TRBV7-3A0A075B6L6 115 aa-0.69□□□□□ -2.52
ITGB5-213ENST00000608945 C9orf92A6NGG3 77 aa-0.69□□□□□ -2.52
ITGB5-213ENST00000608945 SFT2D2O95562 160 aa-0.69□□□□□ -2.52
ITGB5-213ENST00000608945 MGPP08493 103 aa-0.69□□□□□ -2.52
ITGB5-213ENST00000608945 SMIM21Q3B7S5 101 aa-0.69□□□□□ -2.52
ITGB5-213ENST00000608945 Q8N8P6 123 aa-0.69□□□□□ -2.52
ITGB5-213ENST00000608945 TMEM263Q8WUH6 116 aaKnown RBP-0.69□□□□□ -2.52
ITGB5-213ENST00000608945 USMG5Q96IX5 58 aa-0.69□□□□□ -2.52
ITGB5-213ENST00000608945 APLNQ9ULZ1 77 aa-0.69□□□□□ -2.52
ITGB5-213ENST00000608945 QSER1Q2KHR3 1735 aa-0.69□□□□□ -2.52
ITGB5-213ENST00000608945 TIAM2Q8IVF5 1701 aa-0.69□□□□□ -2.52
ITGB5-213ENST00000608945 PLXNC1O60486 1568 aa-0.7□□□□□ -2.52
ITGB5-213ENST00000608945 MYOM3Q5VTT5 1437 aa-0.7□□□□□ -2.52
ITGB5-213ENST00000608945 ANKRD50Q9ULJ7 1429 aa-0.7□□□□□ -2.52
ITGB5-213ENST00000608945 TARBP1Q13395 1621 aaKnown RBP-0.7□□□□□ -2.52
ITGB5-213ENST00000608945 ALKQ9UM73 1620 aa-0.7□□□□□ -2.52
ITGB5-213ENST00000608945 HMGN4O00479 90 aa-0.7□□□□□ -2.52
ITGB5-213ENST00000608945 ARPC4P59998 168 aa-0.7□□□□□ -2.52
ITGB5-213ENST00000608945 UBA52P62987 128 aaKnown RBP-0.7□□□□□ -2.52
ITGB5-213ENST00000608945 PPP3R2Q96LZ3 170 aa-0.7□□□□□ -2.52
ITGB5-213ENST00000608945 RERGLQ9H628 205 aa-0.7□□□□□ -2.52
ITGB5-213ENST00000608945 SERP1Q9Y6X1 66 aa-0.7□□□□□ -2.52
ITGB5-213ENST00000608945 CUL7Q14999 1698 aa-0.7□□□□□ -2.52
ITGB5-213ENST00000608945 TOPAZ1Q8N9V7 1692 aa-0.7□□□□□ -2.52
ITGB5-213ENST00000608945 PREX1Q8TCU6 1659 aa-0.7□□□□□ -2.52
ITGB5-213ENST00000608945 PDCD11Q14690 1871 aaKnown RBP-0.7□□□□□ -2.52
ITGB5-213ENST00000608945 ARAP2Q8WZ64 1704 aa-0.7□□□□□ -2.52
ITGB5-213ENST00000608945 CDK5RAP2Q96SN8 1893 aa-0.71□□□□□ -2.52
ITGB5-213ENST00000608945 WIZO95785 1651 aa-0.71□□□□□ -2.52
ITGB5-213ENST00000608945 SHPRHQ149N8 1683 aa-0.71□□□□□ -2.52
ITGB5-213ENST00000608945 ZNF831Q5JPB2 1677 aa-0.71□□□□□ -2.52
ITGB5-213ENST00000608945 TCHHQ07283 1943 aa-0.71□□□□□ -2.52
ITGB5-213ENST00000608945 LRRC37AA6NMS7 1700 aa-0.71□□□□□ -2.52
ITGB5-213ENST00000608945 PHLPP1O60346 1717 aa-0.71□□□□□ -2.52
ITGB5-213ENST00000608945 CPSF4LA6NMK7 179 aaKnown RBP-0.71□□□□□ -2.52
ITGB5-213ENST00000608945 H0YGG7 62 aa-0.71□□□□□ -2.52
ITGB5-213ENST00000608945 IFNGP01579 166 aa-0.71□□□□□ -2.52
ITGB5-213ENST00000608945 WHAMMP3Q1A5X7 153 aa-0.71□□□□□ -2.52
ITGB5-213ENST00000608945 DEFB110Q30KQ9 67 aa-0.71□□□□□ -2.52
ITGB5-213ENST00000608945 MRPL54Q6P161 138 aaKnown RBP-0.71□□□□□ -2.52
ITGB5-213ENST00000608945 LCN9Q8WX39 176 aa-0.71□□□□□ -2.52
ITGB5-213ENST00000608945 SPRR4Q96PI1 79 aa-0.71□□□□□ -2.52
ITGB5-213ENST00000608945 PAIP2BQ9ULR5 123 aaKnown RBP-0.71□□□□□ -2.52
ITGB5-213ENST00000608945 SPEF2Q9C093 1822 aa-0.71□□□□□ -2.52
ITGB5-213ENST00000608945 USP32Q8NFA0 1604 aa-0.71□□□□□ -2.52
ITGB5-213ENST00000608945 ROBO1Q9Y6N7 1651 aa-0.72□□□□□ -2.52
ITGB5-213ENST00000608945 CFTRP13569 1480 aa-0.72□□□□□ -2.52
ITGB5-213ENST00000608945 C1orf167Q5SNV9 1468 aa-0.72□□□□□ -2.52
ITGB5-213ENST00000608945 PLEKHH2Q8IVE3 1493 aa-0.72□□□□□ -2.52
ITGB5-213ENST00000608945 FYCO1Q9BQS8 1478 aa-0.72□□□□□ -2.52
ITGB5-213ENST00000608945 ANKRD36CQ5JPF3 1778 aa-0.72□□□□□ -2.52
ITGB5-213ENST00000608945 CUX1P39880 1505 aa-0.72□□□□□ -2.52
ITGB5-213ENST00000608945 WFDC13Q8IUB5 93 aa-0.72□□□□□ -2.52
ITGB5-213ENST00000608945 FDCSPQ8NFU4 85 aa-0.72□□□□□ -2.52
ITGB5-213ENST00000608945 TSLPQ969D9 159 aa-0.72□□□□□ -2.52
ITGB5-213ENST00000608945 DIP2CQ9Y2E4 1556 aa-0.72□□□□□ -2.52
ITGB5-213ENST00000608945 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.72□□□□□ -2.53
ITGB5-213ENST00000608945 NLRP1Q9C000 1473 aa-0.73□□□□□ -2.53
ITGB5-213ENST00000608945 MRC2Q9UBG0 1479 aa-0.73□□□□□ -2.53
ITGB5-213ENST00000608945 SETBP1Q9Y6X0 1596 aa-0.73□□□□□ -2.53
ITGB5-213ENST00000608945 FAM25AB3EWG3 89 aa-0.73□□□□□ -2.53
ITGB5-213ENST00000608945 FAM25CB3EWG5 89 aa-0.73□□□□□ -2.53
ITGB5-213ENST00000608945 FAM25GB3EWG6 89 aa-0.73□□□□□ -2.53
ITGB5-213ENST00000608945 SSSCA1O60232 199 aa-0.73□□□□□ -2.53
ITGB5-213ENST00000608945 UBE2D3P61077 147 aa-0.73□□□□□ -2.53
ITGB5-213ENST00000608945 UBE2D2P62837 147 aa-0.73□□□□□ -2.53
ITGB5-213ENST00000608945 C10orf113Q5VZT2 155 aa-0.73□□□□□ -2.53
ITGB5-213ENST00000608945 C8orf59Q8N0T1 100 aaPredicted RBP-0.73□□□□□ -2.53
ITGB5-213ENST00000608945 MYOZ3Q8TDC0 251 aa-0.73□□□□□ -2.53
ITGB5-213ENST00000608945 LSM10Q969L4 123 aaKnown RBP-0.73□□□□□ -2.53
ITGB5-213ENST00000608945 SNRNP25Q9BV90 132 aaKnown RBP-0.73□□□□□ -2.53
ITGB5-213ENST00000608945 NXT2Q9NPJ8 142 aaKnown RBP-0.73□□□□□ -2.53
ITGB5-213ENST00000608945 UQCR10Q9UDW1 63 aa-0.73□□□□□ -2.53
ITGB5-213ENST00000608945 CHD1O14646 1710 aa-0.73□□□□□ -2.53
ITGB5-213ENST00000608945 RGPD1P0DJD0 1748 aa-0.73□□□□□ -2.53
ITGB5-213ENST00000608945 MON2Q7Z3U7 1717 aa-0.73□□□□□ -2.53
ITGB5-213ENST00000608945 FOCADQ5VW36 1801 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms