RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 GAFA1Q96PS6 74 aa2.15□□□□□ -2.07
LINC00343-211ENST00000608426 CRCT1Q9UGL9 99 aa2.15□□□□□ -2.07
LINC00343-211ENST00000608426 DNAJC13O75165 2243 aa2.15□□□□□ -2.07
LINC00343-211ENST00000608426 SAMD9LQ8IVG5 1584 aa2.15□□□□□ -2.07
LINC00343-211ENST00000608426 COX17Q14061 63 aa2.14□□□□□ -2.07
LINC00343-211ENST00000608426 C5orf56Q8N8D9 126 aa2.14□□□□□ -2.07
LINC00343-211ENST00000608426 TMEM14CQ9P0S9 112 aa2.14□□□□□ -2.07
LINC00343-211ENST00000608426 INTS1Q8N201 2190 aaKnown RBP2.13□□□□□ -2.07
LINC00343-211ENST00000608426 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.13□□□□□ -2.07
LINC00343-211ENST00000608426 TRGV4A0A0C4DH28 118 aa2.13□□□□□ -2.07
LINC00343-211ENST00000608426 IGKV2-29A2NJV5 120 aaPredicted RBP2.13□□□□□ -2.07
LINC00343-211ENST00000608426 M0R1W7 72 aa2.13□□□□□ -2.07
LINC00343-211ENST00000608426 SPINK4O60575 86 aa2.13□□□□□ -2.07
LINC00343-211ENST00000608426 COX6B1P14854 86 aa2.13□□□□□ -2.07
LINC00343-211ENST00000608426 DEFB112Q30KQ8 113 aa2.13□□□□□ -2.07
LINC00343-211ENST00000608426 C10orf55Q5SWW7 151 aa2.13□□□□□ -2.07
LINC00343-211ENST00000608426 LINC00472Q9H8W2 130 aa2.13□□□□□ -2.07
LINC00343-211ENST00000608426 ARFGEF3Q5TH69 2177 aa2.12□□□□□ -2.07
LINC00343-211ENST00000608426 PRRC2BQ5JSZ5 2229 aaKnown RBP2.12□□□□□ -2.07
LINC00343-211ENST00000608426 TRGV1A0A0A0MS02 117 aa2.12□□□□□ -2.07
LINC00343-211ENST00000608426 LINC01546A6NGU7 62 aa2.12□□□□□ -2.07
LINC00343-211ENST00000608426 IGIPA6NJ69 53 aa2.12□□□□□ -2.07
LINC00343-211ENST00000608426 I3L3M4 83 aa2.12□□□□□ -2.07
LINC00343-211ENST00000608426 Q96NJ1 140 aa2.12□□□□□ -2.07
LINC00343-211ENST00000608426 SPAG17Q6Q759 2223 aa2.11□□□□□ -2.07
LINC00343-211ENST00000608426 UNC13CQ8NB66 2214 aa2.11□□□□□ -2.07
LINC00343-211ENST00000608426 TOGARAM1Q9Y4F4 1720 aa2.11□□□□□ -2.07
LINC00343-211ENST00000608426 DUOX1Q9NRD9 1551 aa2.11□□□□□ -2.07
LINC00343-211ENST00000608426 ZNF625Q96I27 306 aaPredicted RBP2.11□□□□□ -2.07
LINC00343-211ENST00000608426 TIMM8BQ9Y5J9 83 aaPredicted RBP2.11□□□□□ -2.07
LINC00343-211ENST00000608426 MUC6Q6W4X9 2439 aa2.1□□□□□ -2.07
LINC00343-211ENST00000608426 ABCA4P78363 2273 aa2.1□□□□□ -2.07
LINC00343-211ENST00000608426 LINC00959A0A1B0GUT2 108 aa2.1□□□□□ -2.07
LINC00343-211ENST00000608426 NDUFA4O00483 81 aa2.1□□□□□ -2.07
LINC00343-211ENST00000608426 ARL14EPLP0DKL9 152 aa2.1□□□□□ -2.07
LINC00343-211ENST00000608426 FXYD6P3P58550 94 aa2.1□□□□□ -2.07
LINC00343-211ENST00000608426 FXYD4P59646 89 aa2.1□□□□□ -2.07
LINC00343-211ENST00000608426 KRTAP12-1P59990 96 aa2.1□□□□□ -2.07
LINC00343-211ENST00000608426 C4AP0C0L4 1744 aa2.1□□□□□ -2.07
LINC00343-211ENST00000608426 TRGV2A0A075B6R0 118 aa2.09□□□□□ -2.07
LINC00343-211ENST00000608426 LOC110117498A0A087WWA1 95 aa2.09□□□□□ -2.07
LINC00343-211ENST00000608426 DOCK10Q96BY6 2186 aa2.09□□□□□ -2.08
LINC00343-211ENST00000608426 INE1O15225 51 aa2.08□□□□□ -2.08
LINC00343-211ENST00000608426 DEFB114Q30KQ6 69 aa2.08□□□□□ -2.08
LINC00343-211ENST00000608426 COA5Q86WW8 74 aa2.08□□□□□ -2.08
LINC00343-211ENST00000608426 BAHCC1Q9P281 2608 aa2.08□□□□□ -2.08
LINC00343-211ENST00000608426 LMO7Q8WWI1 1683 aa2.07□□□□□ -2.08
LINC00343-211ENST00000608426 A0A1B0GU69 56 aa2.07□□□□□ -2.08
LINC00343-211ENST00000608426 H3BRN7 92 aa2.07□□□□□ -2.08
LINC00343-211ENST00000608426 ACYP2P14621 99 aa2.07□□□□□ -2.08
LINC00343-211ENST00000608426 ZFHX2Q9C0A1 2572 aaPredicted RBP2.07□□□□□ -2.08
LINC00343-211ENST00000608426 SDK1Q7Z5N4 2213 aa2.07□□□□□ -2.08
LINC00343-211ENST00000608426 COL4A2P08572 1712 aa2.06□□□□□ -2.08
LINC00343-211ENST00000608426 COX7BP24311 80 aa2.06□□□□□ -2.08
LINC00343-211ENST00000608426 M0R2N4 97 aa2.05□□□□□ -2.08
LINC00343-211ENST00000608426 NDUFA3O95167 84 aa2.05□□□□□ -2.08
LINC00343-211ENST00000608426 HAMPP81172 84 aa2.05□□□□□ -2.08
LINC00343-211ENST00000608426 SORL1Q92673 2214 aa2.05□□□□□ -2.08
LINC00343-211ENST00000608426 ETDCA0A1B0GVM5 59 aa2.04□□□□□ -2.08
LINC00343-211ENST00000608426 LRRC37A2A6NM11 1700 aa2.04□□□□□ -2.08
LINC00343-211ENST00000608426 H0YGX0 51 aa2.04□□□□□ -2.08
LINC00343-211ENST00000608426 PLXNB2O15031 1838 aa2.04□□□□□ -2.08
LINC00343-211ENST00000608426 C4BP0C0L5 1744 aa2.04□□□□□ -2.08
LINC00343-211ENST00000608426 KCNQ1DNQ9H478 68 aa2.04□□□□□ -2.08
LINC00343-211ENST00000608426 NCR3O14931 201 aa2.02□□□□□ -2.09
LINC00343-211ENST00000608426 Q6ZQY7 126 aa2.02□□□□□ -2.09
LINC00343-211ENST00000608426 TMEM167BQ9NRX6 74 aa2.02□□□□□ -2.09
LINC00343-211ENST00000608426 KMT2BQ9UMN6 2715 aaPredicted RBP2.02□□□□□ -2.09
LINC00343-211ENST00000608426 BRWD1Q9NSI6 2320 aa2.01□□□□□ -2.09
LINC00343-211ENST00000608426 CCL19Q99731 98 aa2.01□□□□□ -2.09
LINC00343-211ENST00000608426 A0A0G2JMZ2 1700 aa2□□□□□ -2.09
LINC00343-211ENST00000608426 LRRC37AA6NMS7 1700 aa2□□□□□ -2.09
LINC00343-211ENST00000608426 PIN1P1O15428 100 aa2□□□□□ -2.09
LINC00343-211ENST00000608426 CPSF4LA6NMK7 179 aaKnown RBP1.99□□□□□ -2.09
LINC00343-211ENST00000608426 RPL38P63173 70 aaKnown RBP1.99□□□□□ -2.09
LINC00343-211ENST00000608426 DEFB103AP81534 67 aa1.99□□□□□ -2.09
LINC00343-211ENST00000608426 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.99□□□□□ -2.09
LINC00343-211ENST00000608426 KRTAP4-1Q9BYQ7 146 aa1.99□□□□□ -2.09
LINC00343-211ENST00000608426 ALPK2Q86TB3 2170 aa1.99□□□□□ -2.09
LINC00343-211ENST00000608426 CACNA1GO43497 2377 aa1.98□□□□□ -2.09
LINC00343-211ENST00000608426 Q6ZRX8 168 aa1.98□□□□□ -2.09
LINC00343-211ENST00000608426 SSBP3-AS1Q7Z2R9 100 aa1.98□□□□□ -2.09
LINC00343-211ENST00000608426 TNCP24821 2201 aa1.98□□□□□ -2.09
LINC00343-211ENST00000608426 G3V318 75 aa1.97□□□□□ -2.09
LINC00343-211ENST00000608426 MRPL33O75394 65 aaKnown RBP1.97□□□□□ -2.09
LINC00343-211ENST00000608426 Q6ZRN7 208 aaPredicted RBP1.97□□□□□ -2.09
LINC00343-211ENST00000608426 SMIM11BQ8TCY0 68 aa1.97□□□□□ -2.09
LINC00343-211ENST00000608426 PLAC4Q8WY50 150 aa1.97□□□□□ -2.09
LINC00343-211ENST00000608426 FREM1Q5H8C1 2179 aa1.96□□□□□ -2.1
LINC00343-211ENST00000608426 DEFB131BA0A096LNP1 70 aa1.96□□□□□ -2.1
LINC00343-211ENST00000608426 GVQW2A0A096LPI5 108 aaPredicted RBP1.95□□□□□ -2.1
LINC00343-211ENST00000608426 LY6G6CO95867 125 aa1.95□□□□□ -2.1
LINC00343-211ENST00000608426 PCOTHQ58A44 107 aa1.95□□□□□ -2.1
LINC00343-211ENST00000608426 C10orf99Q6UWK7 81 aa1.95□□□□□ -2.1
LINC00343-211ENST00000608426 MED13LQ71F56 2210 aa1.94□□□□□ -2.1
LINC00343-211ENST00000608426 A0A096LNT2 108 aa1.94□□□□□ -2.1
LINC00343-211ENST00000608426 PRB1P04280 392 aa1.94□□□□□ -2.1
LINC00343-211ENST00000608426 CRIP1P50238 77 aa1.94□□□□□ -2.1
LINC00343-211ENST00000608426 CACNA1CQ13936 2221 aa1.94□□□□□ -2.1
LINC00343-211ENST00000608426 SSC5DA1L4H1 1573 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms