RNA–Protein interactions for RNA: ENST00000607320.5

RFTN1-212, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 3

Gene RFTN1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-212ENST00000607320 NDUFA6P56556 154 aa6.32□□□□□ -1.4
RFTN1-212ENST00000607320 IFITM2Q01629 132 aa6.32□□□□□ -1.4
RFTN1-212ENST00000607320 RHEBQ15382 184 aa6.32□□□□□ -1.4
RFTN1-212ENST00000607320 TYMSOSQ8TAI1 123 aa6.32□□□□□ -1.4
RFTN1-212ENST00000607320 RPS10P5Q9NQ39 176 aa6.32□□□□□ -1.4
RFTN1-212ENST00000607320 A0A087X002 238 aa6.31□□□□□ -1.4
RFTN1-212ENST00000607320 TSPAN13O95857 204 aa6.31□□□□□ -1.4
RFTN1-212ENST00000607320 PFN2P35080 140 aa6.31□□□□□ -1.4
RFTN1-212ENST00000607320 COMMD7Q86VX2 200 aa6.31□□□□□ -1.4
RFTN1-212ENST00000607320 COX17Q14061 63 aa6.3□□□□□ -1.4
RFTN1-212ENST00000607320 C10orf91Q5T1B1 145 aa6.3□□□□□ -1.4
RFTN1-212ENST00000607320 SFTA2Q6UW10 78 aa6.3□□□□□ -1.4
RFTN1-212ENST00000607320 IGKV2-28A0A075B6P5 120 aa6.29□□□□□ -1.4
RFTN1-212ENST00000607320 IGKV2D-28P01615 120 aa6.29□□□□□ -1.4
RFTN1-212ENST00000607320 HBDP02042 147 aa6.29□□□□□ -1.4
RFTN1-212ENST00000607320 LINC00614P0C842 121 aa6.29□□□□□ -1.4
RFTN1-212ENST00000607320 ZNF22P17026 224 aaPredicted RBP6.29□□□□□ -1.4
RFTN1-212ENST00000607320 RPL24P83731 157 aaKnown RBP6.29□□□□□ -1.4
RFTN1-212ENST00000607320 FAM229BQ4G0N7 80 aa6.29□□□□□ -1.4
RFTN1-212ENST00000607320 KRTAP13-1Q8IUC0 172 aa6.29□□□□□ -1.4
RFTN1-212ENST00000607320 C18orf32Q8TCD1 76 aa6.29□□□□□ -1.4
RFTN1-212ENST00000607320 ERG28Q9UKR5 140 aa6.29□□□□□ -1.4
RFTN1-212ENST00000607320 TRAPPC1Q9Y5R8 145 aa6.29□□□□□ -1.4
RFTN1-212ENST00000607320 A0A096LNJ9 63 aa6.28□□□□□ -1.4
RFTN1-212ENST00000607320 TMEM170BQ5T4T1 132 aa6.27□□□□□ -1.41
RFTN1-212ENST00000607320 FAM19A1Q7Z5A9 133 aa6.27□□□□□ -1.41
RFTN1-212ENST00000607320 SND1-IT1Q9HBX3 110 aa6.27□□□□□ -1.41
RFTN1-212ENST00000607320 SCO1O75880 301 aa6.26□□□□□ -1.41
RFTN1-212ENST00000607320 BAGE3Q86Y29 109 aa6.26□□□□□ -1.41
RFTN1-212ENST00000607320 ZNF625Q96I27 306 aaPredicted RBP6.26□□□□□ -1.41
RFTN1-212ENST00000607320 TMEM126AQ9H061 195 aa6.26□□□□□ -1.41
RFTN1-212ENST00000607320 ANAPC11Q9NYG5 84 aa6.26□□□□□ -1.41
RFTN1-212ENST00000607320 IGKV2D-26A0A0A0MRZ7 120 aa6.25□□□□□ -1.41
RFTN1-212ENST00000607320 C11orf86A6NJI1 115 aa6.25□□□□□ -1.41
RFTN1-212ENST00000607320 PMCHL1Q16048 86 aa6.25□□□□□ -1.41
RFTN1-212ENST00000607320 KRTAP13-2Q52LG2 175 aa6.25□□□□□ -1.41
RFTN1-212ENST00000607320 LINC00304Q8N9R0 145 aa6.25□□□□□ -1.41
RFTN1-212ENST00000607320 A0A0U1RQV1 116 aa6.24□□□□□ -1.41
RFTN1-212ENST00000607320 PRLHP81277 87 aa6.24□□□□□ -1.41
RFTN1-212ENST00000607320 CHTOPQ9Y3Y2 248 aaKnown RBP6.24□□□□□ -1.41
RFTN1-212ENST00000607320 LOC100996750A0A140TA64 210 aa6.23□□□□□ -1.41
RFTN1-212ENST00000607320 TMEM238C9JI98 176 aa6.23□□□□□ -1.41
RFTN1-212ENST00000607320 M0R378 163 aa6.23□□□□□ -1.41
RFTN1-212ENST00000607320 LINC00158P58513 81 aa6.23□□□□□ -1.41
RFTN1-212ENST00000607320 CTAG1AP78358 180 aa6.23□□□□□ -1.41
RFTN1-212ENST00000607320 NDUFA5Q16718 116 aa6.23□□□□□ -1.41
RFTN1-212ENST00000607320 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
RFTN1-212ENST00000607320 SNAPINO95295 136 aa6.22□□□□□ -1.41
RFTN1-212ENST00000607320 APOC3P02656 99 aa6.22□□□□□ -1.41
RFTN1-212ENST00000607320 CBLN2Q8IUK8 224 aa6.22□□□□□ -1.41
RFTN1-212ENST00000607320 SVBPQ8N300 66 aa6.22□□□□□ -1.41
RFTN1-212ENST00000607320 TRAV12-1A0A0B4J245 112 aa6.21□□□□□ -1.42
RFTN1-212ENST00000607320 ATP6V1G1O75348 118 aa6.21□□□□□ -1.42
RFTN1-212ENST00000607320 KRTAP19-1Q8IUB9 90 aa6.21□□□□□ -1.42
RFTN1-212ENST00000607320 CHCHD1Q96BP2 118 aaKnown RBP6.21□□□□□ -1.42
RFTN1-212ENST00000607320 PLEKHB2Q96CS7 222 aa6.21□□□□□ -1.42
RFTN1-212ENST00000607320 TMEM223A0PJW6 202 aa6.2□□□□□ -1.42
RFTN1-212ENST00000607320 Q8NDZ9 215 aa6.2□□□□□ -1.42
RFTN1-212ENST00000607320 IFI27L1Q96BM0 104 aa6.2□□□□□ -1.42
RFTN1-212ENST00000607320 HIGD2AQ9BW72 106 aa6.2□□□□□ -1.42
RFTN1-212ENST00000607320 MUC2Q02817 5179 aa6.2□□□□□ -1.42
RFTN1-212ENST00000607320 A0A0U1RRA0 63 aa6.19□□□□□ -1.42
RFTN1-212ENST00000607320 LINC00587B1AMM8 73 aa6.19□□□□□ -1.42
RFTN1-212ENST00000607320 MEIG1Q5JSS6 88 aa6.19□□□□□ -1.42
RFTN1-212ENST00000607320 RETNLBQ9BQ08 111 aa6.19□□□□□ -1.42
RFTN1-212ENST00000607320 HERV-K104P63124 156 aa6.18□□□□□ -1.42
RFTN1-212ENST00000607320 ZNF706Q9Y5V0 76 aaPredicted RBP6.18□□□□□ -1.42
RFTN1-212ENST00000607320 SMIM13P0DJ93 91 aa6.17□□□□□ -1.42
RFTN1-212ENST00000607320 TPRXLQ17RH7 258 aa6.17□□□□□ -1.42
RFTN1-212ENST00000607320 SPAG11AQ6PDA7 123 aa6.17□□□□□ -1.42
RFTN1-212ENST00000607320 BOD1L2Q8IYS8 172 aa6.17□□□□□ -1.42
RFTN1-212ENST00000607320 C3orf22Q8N5N4 141 aa6.17□□□□□ -1.42
RFTN1-212ENST00000607320 IGLV7-46A0A075B6I9 117 aa6.16□□□□□ -1.42
RFTN1-212ENST00000607320 HSBP1O75506 76 aa6.16□□□□□ -1.42
RFTN1-212ENST00000607320 S100A12P80511 92 aa6.16□□□□□ -1.42
RFTN1-212ENST00000607320 MIR7-3HGQ8N6C7 128 aa6.16□□□□□ -1.42
RFTN1-212ENST00000607320 SPRR4Q96PI1 79 aa6.16□□□□□ -1.42
RFTN1-212ENST00000607320 MAP1LC3CQ9BXW4 147 aa6.16□□□□□ -1.42
RFTN1-212ENST00000607320 MYMXA0A1B0GTQ4 84 aa6.15□□□□□ -1.42
RFTN1-212ENST00000607320 KRTAP15-1Q3LI76 137 aa6.15□□□□□ -1.42
RFTN1-212ENST00000607320 LINC00337Q8N6G1 96 aa6.15□□□□□ -1.42
RFTN1-212ENST00000607320 NDUFA12Q9UI09 145 aa6.15□□□□□ -1.42
RFTN1-212ENST00000607320 ETDCA0A1B0GVM5 59 aa6.14□□□□□ -1.43
RFTN1-212ENST00000607320 NCR3O14931 201 aa6.14□□□□□ -1.43
RFTN1-212ENST00000607320 YPEL4Q96NS1 127 aa6.14□□□□□ -1.43
RFTN1-212ENST00000607320 KCNQ1DNQ9H478 68 aa6.14□□□□□ -1.43
RFTN1-212ENST00000607320 SPRR1AP35321 89 aa6.13□□□□□ -1.43
RFTN1-212ENST00000607320 FAM19A2Q8N3H0 131 aa6.13□□□□□ -1.43
RFTN1-212ENST00000607320 H0Y8G0 127 aa6.12□□□□□ -1.43
RFTN1-212ENST00000607320 SMCR5Q8TEV8 140 aa6.12□□□□□ -1.43
RFTN1-212ENST00000607320 PPDPFQ9H3Y8 114 aa6.12□□□□□ -1.43
RFTN1-212ENST00000607320 TRBV10-3A0A0K0K1G6 114 aa6.11□□□□□ -1.43
RFTN1-212ENST00000607320 LEPROTL1O95214 131 aa6.11□□□□□ -1.43
RFTN1-212ENST00000607320 PLNP26678 52 aa6.11□□□□□ -1.43
RFTN1-212ENST00000607320 FP248Q71RG6 208 aaPredicted RBP6.11□□□□□ -1.43
RFTN1-212ENST00000607320 TRBV10-2A0A0K0K1G8 114 aa6.1□□□□□ -1.43
RFTN1-212ENST00000607320 KRTAP4-16G5E9R7 235 aaPredicted RBP6.1□□□□□ -1.43
RFTN1-212ENST00000607320 LEPROTO15243 131 aa6.1□□□□□ -1.43
RFTN1-212ENST00000607320 HERVK_113P61574 105 aa6.1□□□□□ -1.43
RFTN1-212ENST00000607320 Q8NBF4 154 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms