RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 LINC00315P59091 139 aa3.25□□□□□ -1.89
LINC01109-201ENST00000603837 Q5VV11 94 aa3.25□□□□□ -1.89
LINC01109-201ENST00000603837 SMIM11BQ8TCY0 68 aa3.25□□□□□ -1.89
LINC01109-201ENST00000603837 FAM215AQ9Y5M1 114 aa3.25□□□□□ -1.89
LINC01109-201ENST00000603837 TRBV10-1A0A0K0K1A3 114 aa3.25□□□□□ -1.89
LINC01109-201ENST00000603837 HCG22E2RYF7 251 aa3.25□□□□□ -1.89
LINC01109-201ENST00000603837 PRR9Q5T870 116 aa3.25□□□□□ -1.89
LINC01109-201ENST00000603837 Q6ZTI0 123 aa3.25□□□□□ -1.89
LINC01109-201ENST00000603837 LINC00574Q9H8X3 128 aa3.25□□□□□ -1.89
LINC01109-201ENST00000603837 TENM4Q6N022 2769 aa3.25□□□□□ -1.89
LINC01109-201ENST00000603837 NBPF19A0A087WUL8 3843 aa3.25□□□□□ -1.89
LINC01109-201ENST00000603837 BPY2O14599 106 aa3.24□□□□□ -1.89
LINC01109-201ENST00000603837 IGHV4-28A0A0C4DH34 117 aa3.24□□□□□ -1.89
LINC01109-201ENST00000603837 LINC01560Q8TB33 94 aa3.24□□□□□ -1.89
LINC01109-201ENST00000603837 GNRH2O43555 120 aa3.23□□□□□ -1.89
LINC01109-201ENST00000603837 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.23□□□□□ -1.89
LINC01109-201ENST00000603837 HIGD2AQ9BW72 106 aa3.23□□□□□ -1.89
LINC01109-201ENST00000603837 IGLV5-45A0A087WSX0 123 aa3.23□□□□□ -1.89
LINC01109-201ENST00000603837 IGHV4-61A0A0C4DH41 118 aa3.23□□□□□ -1.89
LINC01109-201ENST00000603837 IGHV4-59P01825 116 aa3.23□□□□□ -1.89
LINC01109-201ENST00000603837 IGHV4-30-4P0DP06 118 aa3.23□□□□□ -1.89
LINC01109-201ENST00000603837 FAM74A4Q5TZK3 123 aa3.23□□□□□ -1.89
LINC01109-201ENST00000603837 Q6YL49 198 aa3.23□□□□□ -1.89
LINC01109-201ENST00000603837 DEFB108BQ8NET1 73 aa3.23□□□□□ -1.89
LINC01109-201ENST00000603837 IGHV3OR16-8A0A075B7F1 116 aa3.23□□□□□ -1.89
LINC01109-201ENST00000603837 CLPSL1A2RUU4 121 aa3.23□□□□□ -1.89
LINC01109-201ENST00000603837 PSCAO43653 123 aa3.23□□□□□ -1.89
LINC01109-201ENST00000603837 RNASE3P12724 160 aaKnown RBP3.23□□□□□ -1.89
LINC01109-201ENST00000603837 PLA2G2AP14555 144 aa3.23□□□□□ -1.89
LINC01109-201ENST00000603837 CDKN2A-AS1Q9UH64 79 aa3.23□□□□□ -1.89
LINC01109-201ENST00000603837 CUBNO60494 3623 aa3.22□□□□□ -1.89
LINC01109-201ENST00000603837 C3orf84H3BNL1 204 aa3.22□□□□□ -1.89
LINC01109-201ENST00000603837 J3QKU1 62 aa3.22□□□□□ -1.89
LINC01109-201ENST00000603837 IGKV3-15P01624 115 aa3.22□□□□□ -1.89
LINC01109-201ENST00000603837 IGLV1-44P01699 117 aa3.22□□□□□ -1.89
LINC01109-201ENST00000603837 CCL3L1P16619 93 aa3.22□□□□□ -1.89
LINC01109-201ENST00000603837 C1orf134Q5TEV5 83 aa3.22□□□□□ -1.89
LINC01109-201ENST00000603837 GAFA1Q96PS6 74 aa3.22□□□□□ -1.89
LINC01109-201ENST00000603837 LENEPQ9Y5L5 61 aa3.22□□□□□ -1.89
LINC01109-201ENST00000603837 JMJD1CQ15652 2540 aa3.22□□□□□ -1.89
LINC01109-201ENST00000603837 TEX15Q9BXT5 2789 aa3.22□□□□□ -1.89
LINC01109-201ENST00000603837 IGKV2-28A0A075B6P5 120 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 TRBV6-8A0A0A6YYG3 113 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 LY6HO94772 140 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 IGKV2D-28P01615 120 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 IGHV3-23P01764 117 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 Q6ZQT0 140 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 FAM104AQ969W3 186 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 NF1P21359 2839 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 APCP25054 2843 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 IGHV3-66A0A0C4DH42 116 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 M0QY20 66 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 ZFAND2AQ8N6M9 145 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 LINC00476Q8WZB0 136 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 KRTAP4-11Q9BYQ6 195 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 DHRS4-AS1Q9P1J3 65 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 FLNAP21333 2647 aaKnown RBP3.21□□□□□ -1.9
LINC01109-201ENST00000603837 TEP1Q99973 2627 aaKnown RBP3.21□□□□□ -1.9
LINC01109-201ENST00000603837 ITPR3Q14573 2671 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 IGHV3-35A0A0C4DH35 117 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 IGLV5-39A0A0G2JS06 123 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 COX7A1P24310 79 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 LINC00167Q96N53 147 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 PRR15LQ9BU68 103 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 OCR1Q9BZK8 76 aa3.21□□□□□ -1.9
LINC01109-201ENST00000603837 UNC79Q9P2D8 2635 aa3.2□□□□□ -1.9
LINC01109-201ENST00000603837 SETXQ7Z333 2677 aaKnown RBP3.2□□□□□ -1.9
LINC01109-201ENST00000603837 C9orf66Q5T8R8 295 aa3.2□□□□□ -1.9
LINC01109-201ENST00000603837 Q8N814 137 aa3.2□□□□□ -1.9
LINC01109-201ENST00000603837 FBN2P35556 2912 aa3.2□□□□□ -1.9
LINC01109-201ENST00000603837 UBR5O95071 2799 aaPredicted RBP3.2□□□□□ -1.9
LINC01109-201ENST00000603837 LUZP6Q538Z0 58 aa3.2□□□□□ -1.9
LINC01109-201ENST00000603837 CYP4F30PQ9H0H9 118 aa3.2□□□□□ -1.9
LINC01109-201ENST00000603837 SORL1Q92673 2214 aa3.2□□□□□ -1.9
LINC01109-201ENST00000603837 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.19□□□□□ -1.9
LINC01109-201ENST00000603837 LOC110117498A0A087WWA1 95 aa3.19□□□□□ -1.9
LINC01109-201ENST00000603837 IGHV3-74A0A0B4J1X5 117 aa3.19□□□□□ -1.9
LINC01109-201ENST00000603837 C19orf84I3L1E1 186 aa3.19□□□□□ -1.9
LINC01109-201ENST00000603837 M0R2N4 97 aa3.19□□□□□ -1.9
LINC01109-201ENST00000603837 PRB2P02812 416 aaPredicted RBP3.19□□□□□ -1.9
LINC01109-201ENST00000603837 LIMD2Q9BT23 127 aa3.19□□□□□ -1.9
LINC01109-201ENST00000603837 IGLV11-55A0A075B6I3 123 aa3.19□□□□□ -1.9
LINC01109-201ENST00000603837 C8orf17Q9NRJ1 99 aa3.19□□□□□ -1.9
LINC01109-201ENST00000603837 NOTCH3Q9UM47 2321 aa3.19□□□□□ -1.9
LINC01109-201ENST00000603837 C11orf71Q6IPW1 123 aa3.18□□□□□ -1.9
LINC01109-201ENST00000603837 KLK9Q9UKQ9 250 aa3.18□□□□□ -1.9
LINC01109-201ENST00000603837 HIVEP2P31629 2446 aa3.18□□□□□ -1.9
LINC01109-201ENST00000603837 MXRA5Q9NR99 2828 aa3.18□□□□□ -1.9
LINC01109-201ENST00000603837 SMIM1B2RUZ4 78 aa3.18□□□□□ -1.9
LINC01109-201ENST00000603837 COX6A2Q02221 97 aa3.18□□□□□ -1.9
LINC01109-201ENST00000603837 PRR4Q16378 134 aa3.18□□□□□ -1.9
LINC01109-201ENST00000603837 NTM-AS1Q6ZSK4 140 aa3.18□□□□□ -1.9
LINC01109-201ENST00000603837 CDC42SE1Q9NRR8 79 aa3.18□□□□□ -1.9
LINC01109-201ENST00000603837 IGHV3-49A0A0A0MS15 119 aa3.18□□□□□ -1.9
LINC01109-201ENST00000603837 LYNX1G3V0Z9 82 aa3.18□□□□□ -1.9
LINC01109-201ENST00000603837 IGLV1-51P01701 117 aa3.18□□□□□ -1.9
LINC01109-201ENST00000603837 LYNX1P0DP58 116 aa3.18□□□□□ -1.9
LINC01109-201ENST00000603837 MOBPQ13875 183 aa3.18□□□□□ -1.9
LINC01109-201ENST00000603837 KRTAP4-2Q9BYR5 136 aa3.18□□□□□ -1.9
LINC01109-201ENST00000603837 IGHV1-3A0A0C4DH29 117 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms