RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 C3orf22Q8N5N4 141 aa13.39□□□□□ -0.27
GTPBP3-227ENST00000602056 RPS10P5Q9NQ39 176 aa13.39□□□□□ -0.27
GTPBP3-227ENST00000602056 MUC17Q685J3 4493 aa13.39□□□□□ -0.27
GTPBP3-227ENST00000602056 RHEBQ15382 184 aa13.37□□□□□ -0.27
GTPBP3-227ENST00000602056 BAGE3Q86Y29 109 aa13.37□□□□□ -0.27
GTPBP3-227ENST00000602056 TPRXLQ17RH7 258 aa13.36□□□□□ -0.27
GTPBP3-227ENST00000602056 TMEM170BQ5T4T1 132 aa13.36□□□□□ -0.27
GTPBP3-227ENST00000602056 CBLN2Q8IUK8 224 aa13.36□□□□□ -0.27
GTPBP3-227ENST00000602056 TRAPPC1Q9Y5R8 145 aa13.36□□□□□ -0.27
GTPBP3-227ENST00000602056 IGLV7-46A0A075B6I9 117 aa13.35□□□□□ -0.27
GTPBP3-227ENST00000602056 CTAG1AP78358 180 aa13.33□□□□□ -0.28
GTPBP3-227ENST00000602056 HIGD2AQ9BW72 106 aa13.33□□□□□ -0.28
GTPBP3-227ENST00000602056 KRTAP9-2Q9BYQ4 174 aa13.33□□□□□ -0.28
GTPBP3-227ENST00000602056 SFTA2Q6UW10 78 aa13.32□□□□□ -0.28
GTPBP3-227ENST00000602056 CDIP1Q9H305 208 aa13.32□□□□□ -0.28
GTPBP3-227ENST00000602056 LINC00158P58513 81 aa13.31□□□□□ -0.28
GTPBP3-227ENST00000602056 A0A0U1RRA0 63 aa13.3□□□□□ -0.28
GTPBP3-227ENST00000602056 SPRR4Q96PI1 79 aa13.3□□□□□ -0.28
GTPBP3-227ENST00000602056 CHTOPQ9Y3Y2 248 aaKnown RBP13.29□□□□□ -0.28
GTPBP3-227ENST00000602056 TMEM223A0PJW6 202 aa13.28□□□□□ -0.28
GTPBP3-227ENST00000602056 PPDPFQ9H3Y8 114 aa13.27□□□□□ -0.29
GTPBP3-227ENST00000602056 SMIM13P0DJ93 91 aa13.24□□□□□ -0.29
GTPBP3-227ENST00000602056 SPAG11AQ6PDA7 123 aa13.23□□□□□ -0.29
GTPBP3-227ENST00000602056 TRAV12-1A0A0B4J245 112 aa13.22□□□□□ -0.29
GTPBP3-227ENST00000602056 SPRR1AP35321 89 aa13.22□□□□□ -0.29
GTPBP3-227ENST00000602056 BOD1L2Q8IYS8 172 aa13.21□□□□□ -0.29
GTPBP3-227ENST00000602056 IFI27L1Q96BM0 104 aa13.21□□□□□ -0.29
GTPBP3-227ENST00000602056 KRTAP4-16G5E9R7 235 aaPredicted RBP13.2□□□□□ -0.3
GTPBP3-227ENST00000602056 PRYO14603 147 aa13.2□□□□□ -0.3
GTPBP3-227ENST00000602056 NCR3O14931 201 aa13.2□□□□□ -0.3
GTPBP3-227ENST00000602056 MIR7-3HGQ8N6C7 128 aa13.19□□□□□ -0.3
GTPBP3-227ENST00000602056 DAND5Q8N907 189 aa13.19□□□□□ -0.3
GTPBP3-227ENST00000602056 KCNQ1DNQ9H478 68 aa13.19□□□□□ -0.3
GTPBP3-227ENST00000602056 APOC3P02656 99 aa13.18□□□□□ -0.3
GTPBP3-227ENST00000602056 LINC00337Q8N6G1 96 aa13.18□□□□□ -0.3
GTPBP3-227ENST00000602056 Q8NBF4 154 aa13.18□□□□□ -0.3
GTPBP3-227ENST00000602056 SMCR5Q8TEV8 140 aa13.18□□□□□ -0.3
GTPBP3-227ENST00000602056 YPEL4Q96NS1 127 aa13.18□□□□□ -0.3
GTPBP3-227ENST00000602056 ZNF706Q9Y5V0 76 aaPredicted RBP13.18□□□□□ -0.3
GTPBP3-227ENST00000602056 CHCHD1Q96BP2 118 aaKnown RBP13.17□□□□□ -0.3
GTPBP3-227ENST00000602056 MEIG1Q5JSS6 88 aa13.16□□□□□ -0.3
GTPBP3-227ENST00000602056 FP248Q71RG6 208 aaPredicted RBP13.16□□□□□ -0.3
GTPBP3-227ENST00000602056 ATP6V1G1O75348 118 aa13.15□□□□□ -0.3
GTPBP3-227ENST00000602056 TRBV10-3A0A0K0K1G6 114 aa13.14□□□□□ -0.31
GTPBP3-227ENST00000602056 KRTAP13-3Q3SY46 172 aa13.14□□□□□ -0.31
GTPBP3-227ENST00000602056 HERV-K104P63124 156 aa13.13□□□□□ -0.31
GTPBP3-227ENST00000602056 C4orf48Q5BLP8 95 aa13.13□□□□□ -0.31
GTPBP3-227ENST00000602056 NDUFA12Q9UI09 145 aa13.13□□□□□ -0.31
GTPBP3-227ENST00000602056 LINC00483Q53H64 154 aa13.12□□□□□ -0.31
GTPBP3-227ENST00000602056 ETDCA0A1B0GVM5 59 aa13.11□□□□□ -0.31
GTPBP3-227ENST00000602056 SNAPINO95295 136 aa13.11□□□□□ -0.31
GTPBP3-227ENST00000602056 SVBPQ8N300 66 aa13.11□□□□□ -0.31
GTPBP3-227ENST00000602056 FAM19A2Q8N3H0 131 aa13.11□□□□□ -0.31
GTPBP3-227ENST00000602056 TSPEAR-AS2P59090 65 aa13.1□□□□□ -0.31
GTPBP3-227ENST00000602056 ERC2-IT1O76042 136 aa13.09□□□□□ -0.31
GTPBP3-227ENST00000602056 B5MCH6 92 aa13.08□□□□□ -0.32
GTPBP3-227ENST00000602056 MYMXA0A1B0GTQ4 84 aa13.07□□□□□ -0.32
GTPBP3-227ENST00000602056 SPINK1P00995 79 aa13.07□□□□□ -0.32
GTPBP3-227ENST00000602056 GAGE2AQ6NT46 116 aa13.07□□□□□ -0.32
GTPBP3-227ENST00000602056 LINC00587B1AMM8 73 aa13.06□□□□□ -0.32
GTPBP3-227ENST00000602056 LOC107984156A0A0G2JMH3 177 aa13.05□□□□□ -0.32
GTPBP3-227ENST00000602056 NDUFA5Q16718 116 aa13.05□□□□□ -0.32
GTPBP3-227ENST00000602056 ASB16-AS1Q495Z4 193 aa13.05□□□□□ -0.32
GTPBP3-227ENST00000602056 ARL17AQ8IVW1 177 aa13.05□□□□□ -0.32
GTPBP3-227ENST00000602056 KRTAP4-1Q9BYQ7 146 aa13.05□□□□□ -0.32
GTPBP3-227ENST00000602056 H0Y8G0 127 aa13.04□□□□□ -0.32
GTPBP3-227ENST00000602056 HSBP1O75506 76 aa13.04□□□□□ -0.32
GTPBP3-227ENST00000602056 Q9BRP9 147 aa13.04□□□□□ -0.32
GTPBP3-227ENST00000602056 MAP1LC3CQ9BXW4 147 aa13.04□□□□□ -0.32
GTPBP3-227ENST00000602056 MOBPQ13875 183 aa13.03□□□□□ -0.32
GTPBP3-227ENST00000602056 LINC00310P59036 64 aa13.02□□□□□ -0.33
GTPBP3-227ENST00000602056 IGLV9-49A0A0B4J1Y8 123 aa13.01□□□□□ -0.33
GTPBP3-227ENST00000602056 LEPROTO15243 131 aa13.01□□□□□ -0.33
GTPBP3-227ENST00000602056 DDTP30046 118 aa13.01□□□□□ -0.33
GTPBP3-227ENST00000602056 TRBV10-2A0A0K0K1G8 114 aa13□□□□□ -0.33
GTPBP3-227ENST00000602056 Q8N377 158 aa13□□□□□ -0.33
GTPBP3-227ENST00000602056 Q6ZRX8 168 aa12.98□□□□□ -0.33
GTPBP3-227ENST00000602056 SSBP3-AS1Q7Z2R9 100 aa12.98□□□□□ -0.33
GTPBP3-227ENST00000602056 KRTAP9-6A0A140TA67 174 aa12.97□□□□□ -0.33
GTPBP3-227ENST00000602056 J3QQQ9 107 aa12.97□□□□□ -0.33
GTPBP3-227ENST00000602056 S100A12P80511 92 aa12.97□□□□□ -0.33
GTPBP3-227ENST00000602056 SERF1AO75920 110 aa12.96□□□□□ -0.33
GTPBP3-227ENST00000602056 LEPROTL1O95214 131 aa12.96□□□□□ -0.33
GTPBP3-227ENST00000602056 RPS29P62273 56 aaKnown RBP12.96□□□□□ -0.33
GTPBP3-227ENST00000602056 IGLV6-57P01721 117 aa12.95□□□□□ -0.34
GTPBP3-227ENST00000602056 TRGC2P03986 189 aa12.95□□□□□ -0.34
GTPBP3-227ENST00000602056 PMCHL2Q9BQD1 86 aa12.95□□□□□ -0.34
GTPBP3-227ENST00000602056 SPANXB1Q9NS25 103 aaPredicted RBP12.95□□□□□ -0.34
GTPBP3-227ENST00000602056 EIF4EBP3O60516 100 aaPredicted RBP12.94□□□□□ -0.34
GTPBP3-227ENST00000602056 PLNP26678 52 aa12.94□□□□□ -0.34
GTPBP3-227ENST00000602056 SOSTDC1Q6X4U4 206 aa12.93□□□□□ -0.34
GTPBP3-227ENST00000602056 NDUFC2O95298 119 aa12.92□□□□□ -0.34
GTPBP3-227ENST00000602056 DPM2O94777 84 aa12.91□□□□□ -0.34
GTPBP3-227ENST00000602056 SEC61BP60468 96 aaKnown RBP12.91□□□□□ -0.34
GTPBP3-227ENST00000602056 SLC25A20O43772 301 aa12.9□□□□□ -0.34
GTPBP3-227ENST00000602056 NMUP48645 174 aa12.9□□□□□ -0.34
GTPBP3-227ENST00000602056 FABP4P15090 132 aa12.89□□□□□ -0.35
GTPBP3-227ENST00000602056 S100A7L2Q5SY68 101 aa12.89□□□□□ -0.35
GTPBP3-227ENST00000602056 ADAMTSL4-AS1Q5T5F5 129 aa12.89□□□□□ -0.35
GTPBP3-227ENST00000602056 MIEN1Q9BRT3 115 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms