RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 TMEM241Q24JQ0 296 aa2.17□□□□□ -2.06
VRK3-222ENST00000601324 AMMECR1LQ6DCA0 310 aa2.17□□□□□ -2.06
VRK3-222ENST00000601324 C5orf38Q86SI9 138 aa2.17□□□□□ -2.06
VRK3-222ENST00000601324 OR10D4PQ8NGN7 298 aa2.17□□□□□ -2.06
VRK3-222ENST00000601324 HIST1H2BAQ96A08 127 aa2.17□□□□□ -2.06
VRK3-222ENST00000601324 TP73-AS1Q9UF72 201 aa2.17□□□□□ -2.06
VRK3-222ENST00000601324 SMIM26A0A096LP01 95 aa2.16□□□□□ -2.06
VRK3-222ENST00000601324 NDUFC2-KCTD14E9PQ53 114 aa2.16□□□□□ -2.06
VRK3-222ENST00000601324 TEX46H3BTG2 121 aa2.16□□□□□ -2.06
VRK3-222ENST00000601324 PLA2G10O15496 165 aa2.16□□□□□ -2.06
VRK3-222ENST00000601324 MGPP08493 103 aa2.16□□□□□ -2.06
VRK3-222ENST00000601324 LINC00614P0C842 121 aa2.16□□□□□ -2.06
VRK3-222ENST00000601324 PFN2P35080 140 aa2.16□□□□□ -2.06
VRK3-222ENST00000601324 RAB5BP61020 215 aa2.16□□□□□ -2.06
VRK3-222ENST00000601324 PYDC2Q56P42 97 aa2.16□□□□□ -2.06
VRK3-222ENST00000601324 DAND5Q8N907 189 aa2.16□□□□□ -2.06
VRK3-222ENST00000601324 PLEKHB2Q96CS7 222 aa2.16□□□□□ -2.06
VRK3-222ENST00000601324 RPL39LQ96EH5 51 aaKnown RBP2.16□□□□□ -2.06
VRK3-222ENST00000601324 FMC1Q96HJ9 113 aa2.16□□□□□ -2.06
VRK3-222ENST00000601324 C14orf144Q96I85 54 aa2.16□□□□□ -2.06
VRK3-222ENST00000601324 MARVELD1Q9BSK0 173 aa2.16□□□□□ -2.06
VRK3-222ENST00000601324 NKX6-2Q9C056 277 aaPredicted RBP2.16□□□□□ -2.06
VRK3-222ENST00000601324 TMEM167BQ9NRX6 74 aa2.16□□□□□ -2.06
VRK3-222ENST00000601324 ALG5Q9Y673 324 aa2.16□□□□□ -2.06
VRK3-222ENST00000601324 GPR98Q8WXG9 6306 aa2.15□□□□□ -2.07
VRK3-222ENST00000601324 TRBV6-5A0A0K0K1A5 114 aa2.15□□□□□ -2.07
VRK3-222ENST00000601324 NDUFA1O15239 70 aa2.15□□□□□ -2.07
VRK3-222ENST00000601324 CXorf1O96002 111 aa2.15□□□□□ -2.07
VRK3-222ENST00000601324 APOC3P02656 99 aa2.15□□□□□ -2.07
VRK3-222ENST00000601324 SMIM17P0DL12 118 aa2.15□□□□□ -2.07
VRK3-222ENST00000601324 ATP6V0CP27449 155 aa2.15□□□□□ -2.07
VRK3-222ENST00000601324 G0S2P27469 103 aa2.15□□□□□ -2.07
VRK3-222ENST00000601324 UBE2G2P60604 165 aa2.15□□□□□ -2.07
VRK3-222ENST00000601324 RPS29P62273 56 aaKnown RBP2.15□□□□□ -2.07
VRK3-222ENST00000601324 SVBPQ8N300 66 aa2.15□□□□□ -2.07
VRK3-222ENST00000601324 SPANXA2-OT1Q8N9U9 137 aa2.15□□□□□ -2.07
VRK3-222ENST00000601324 ST20-AS1Q8NBB2 130 aa2.15□□□□□ -2.07
VRK3-222ENST00000601324 PACRGQ96M98 296 aaPredicted RBP2.15□□□□□ -2.07
VRK3-222ENST00000601324 CNFNQ9BYD5 112 aa2.15□□□□□ -2.07
VRK3-222ENST00000601324 RNASE7Q9H1E1 156 aaKnown RBP2.15□□□□□ -2.07
VRK3-222ENST00000601324 TRBV30A0A0K0K1B3 111 aa2.14□□□□□ -2.07
VRK3-222ENST00000601324 SDHAF1A6NFY7 115 aa2.14□□□□□ -2.07
VRK3-222ENST00000601324 INMT-MINDY4F8WBC2 141 aa2.14□□□□□ -2.07
VRK3-222ENST00000601324 TSTD3H0UI37 97 aa2.14□□□□□ -2.07
VRK3-222ENST00000601324 SIX6O95475 246 aa2.14□□□□□ -2.07
VRK3-222ENST00000601324 MPC2O95563 127 aa2.14□□□□□ -2.07
VRK3-222ENST00000601324 SPINK1P00995 79 aa2.14□□□□□ -2.07
VRK3-222ENST00000601324 POLR2KP53803 58 aaKnown RBP2.14□□□□□ -2.07
VRK3-222ENST00000601324 FOXA3P55318 350 aaPredicted RBP2.14□□□□□ -2.07
VRK3-222ENST00000601324 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
VRK3-222ENST00000601324 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
VRK3-222ENST00000601324 SMIM15Q7Z3B0 74 aa2.14□□□□□ -2.07
VRK3-222ENST00000601324 STOML3Q8TAV4 291 aa2.14□□□□□ -2.07
VRK3-222ENST00000601324 SCGB1C1Q8TD33 95 aa2.14□□□□□ -2.07
VRK3-222ENST00000601324 ORAOV1Q8WV07 137 aa2.14□□□□□ -2.07
VRK3-222ENST00000601324 PSMG3Q9BT73 122 aaPredicted RBP2.14□□□□□ -2.07
VRK3-222ENST00000601324 SMIM3Q9BZL3 60 aa2.14□□□□□ -2.07
VRK3-222ENST00000601324 UBE2D4Q9Y2X8 147 aa2.14□□□□□ -2.07
VRK3-222ENST00000601324 TRAV13-1A0A0B4J241 112 aa2.13□□□□□ -2.07
VRK3-222ENST00000601324 TMEM218A2RU14 115 aa2.13□□□□□ -2.07
VRK3-222ENST00000601324 SMLR1H3BR10 107 aa2.13□□□□□ -2.07
VRK3-222ENST00000601324 KRTAP2-3P0C7H8 128 aa2.13□□□□□ -2.07
VRK3-222ENST00000601324 DDTP30046 118 aa2.13□□□□□ -2.07
VRK3-222ENST00000601324 H2BFSP57053 126 aa2.13□□□□□ -2.07
VRK3-222ENST00000601324 FABP9Q0Z7S8 132 aa2.13□□□□□ -2.07
VRK3-222ENST00000601324 C10orf91Q5T1B1 145 aa2.13□□□□□ -2.07
VRK3-222ENST00000601324 TRIQKQ629K1 86 aa2.13□□□□□ -2.07
VRK3-222ENST00000601324 C2orf82Q6UX34 121 aa2.13□□□□□ -2.07
VRK3-222ENST00000601324 Q6ZUT4 128 aa2.13□□□□□ -2.07
VRK3-222ENST00000601324 MIR7-3HGQ8N6C7 128 aa2.13□□□□□ -2.07
VRK3-222ENST00000601324 BTF3L4Q96K17 158 aa2.13□□□□□ -2.07
VRK3-222ENST00000601324 KRTAP2-4Q9BYR9 128 aa2.13□□□□□ -2.07
VRK3-222ENST00000601324 SMCO4Q9NRQ5 59 aa2.13□□□□□ -2.07
VRK3-222ENST00000601324 TRBV27A0A0K0K1C4 114 aa2.12□□□□□ -2.07
VRK3-222ENST00000601324 HMSDA8MTL9 139 aa2.12□□□□□ -2.07
VRK3-222ENST00000601324 ZNF727A8MUV8 499 aa2.12□□□□□ -2.07
VRK3-222ENST00000601324 I3L3M4 83 aa2.12□□□□□ -2.07
VRK3-222ENST00000601324 DLEU1O43261 78 aa2.12□□□□□ -2.07
VRK3-222ENST00000601324 LYRM1O43325 122 aa2.12□□□□□ -2.07
VRK3-222ENST00000601324 MT-ND4LP03901 98 aa2.12□□□□□ -2.07
VRK3-222ENST00000601324 TRGC1P0CF51 173 aa2.12□□□□□ -2.07
VRK3-222ENST00000601324 S100A2P29034 98 aa2.12□□□□□ -2.07
VRK3-222ENST00000601324 SERF2P84101 59 aa2.12□□□□□ -2.07
VRK3-222ENST00000601324 PEA15Q15121 130 aa2.12□□□□□ -2.07
VRK3-222ENST00000601324 LYZL1Q6UWQ5 148 aa2.12□□□□□ -2.07
VRK3-222ENST00000601324 COX6B2Q6YFQ2 88 aa2.12□□□□□ -2.07
VRK3-222ENST00000601324 PPP1R1CQ8WVI7 109 aa2.12□□□□□ -2.07
VRK3-222ENST00000601324 MRAP2Q96G30 205 aa2.12□□□□□ -2.07
VRK3-222ENST00000601324 SPRR4Q96PI1 79 aa2.12□□□□□ -2.07
VRK3-222ENST00000601324 XAGE1AQ9HD64 81 aa2.12□□□□□ -2.07
VRK3-222ENST00000601324 TMEM242Q9NWH2 141 aa2.12□□□□□ -2.07
VRK3-222ENST00000601324 TNFSF18Q9UNG2 199 aa2.12□□□□□ -2.07
VRK3-222ENST00000601324 C7orf77A4D0Y5 90 aa2.11□□□□□ -2.07
VRK3-222ENST00000601324 F2Z2F3 143 aa2.11□□□□□ -2.07
VRK3-222ENST00000601324 M0R143 59 aa2.11□□□□□ -2.07
VRK3-222ENST00000601324 RAB5AP20339 215 aa2.11□□□□□ -2.07
VRK3-222ENST00000601324 CEBPGP53567 150 aa2.11□□□□□ -2.07
VRK3-222ENST00000601324 UBE2G1P62253 170 aa2.11□□□□□ -2.07
VRK3-222ENST00000601324 PRLHP81277 87 aa2.11□□□□□ -2.07
VRK3-222ENST00000601324 BAGE2Q86Y30 109 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms