RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 CTAG1AP78358 180 aa9.86□□□□□ -0.83
SCAF1-204ENST00000601038 Q8NDZ9 215 aa9.86□□□□□ -0.83
SCAF1-204ENST00000601038 PLEKHB2Q96CS7 222 aa9.85□□□□□ -0.83
SCAF1-204ENST00000601038 RETNLBQ9BQ08 111 aa9.85□□□□□ -0.83
SCAF1-204ENST00000601038 MUC2Q02817 5179 aa9.85□□□□□ -0.83
SCAF1-204ENST00000601038 CBLN2Q8IUK8 224 aa9.83□□□□□ -0.84
SCAF1-204ENST00000601038 LINC00158P58513 81 aa9.82□□□□□ -0.84
SCAF1-204ENST00000601038 CHTOPQ9Y3Y2 248 aaKnown RBP9.82□□□□□ -0.84
SCAF1-204ENST00000601038 TPRXLQ17RH7 258 aa9.8□□□□□ -0.84
SCAF1-204ENST00000601038 HIGD2AQ9BW72 106 aa9.8□□□□□ -0.84
SCAF1-204ENST00000601038 IGLV7-46A0A075B6I9 117 aa9.79□□□□□ -0.84
SCAF1-204ENST00000601038 TMEM223A0PJW6 202 aa9.79□□□□□ -0.84
SCAF1-204ENST00000601038 C3orf22Q8N5N4 141 aa9.79□□□□□ -0.84
SCAF1-204ENST00000601038 CDIP1Q9H305 208 aa9.78□□□□□ -0.84
SCAF1-204ENST00000601038 TRAV12-1A0A0B4J245 112 aa9.77□□□□□ -0.85
SCAF1-204ENST00000601038 A0A0U1RRA0 63 aa9.77□□□□□ -0.85
SCAF1-204ENST00000601038 APOC3P02656 99 aa9.76□□□□□ -0.85
SCAF1-204ENST00000601038 SPAG11AQ6PDA7 123 aa9.76□□□□□ -0.85
SCAF1-204ENST00000601038 IFI27L1Q96BM0 104 aa9.76□□□□□ -0.85
SCAF1-204ENST00000601038 CHCHD1Q96BP2 118 aaKnown RBP9.76□□□□□ -0.85
SCAF1-204ENST00000601038 SPRR4Q96PI1 79 aa9.76□□□□□ -0.85
SCAF1-204ENST00000601038 ATP6V1G1O75348 118 aa9.75□□□□□ -0.85
SCAF1-204ENST00000601038 SNAPINO95295 136 aa9.75□□□□□ -0.85
SCAF1-204ENST00000601038 SMIM13P0DJ93 91 aa9.74□□□□□ -0.85
SCAF1-204ENST00000601038 BOD1L2Q8IYS8 172 aa9.74□□□□□ -0.85
SCAF1-204ENST00000601038 SVBPQ8N300 66 aa9.74□□□□□ -0.85
SCAF1-204ENST00000601038 ZNF706Q9Y5V0 76 aaPredicted RBP9.74□□□□□ -0.85
SCAF1-204ENST00000601038 PRYO14603 147 aa9.73□□□□□ -0.85
SCAF1-204ENST00000601038 SPRR1AP35321 89 aa9.72□□□□□ -0.85
SCAF1-204ENST00000601038 HERV-K104P63124 156 aa9.72□□□□□ -0.85
SCAF1-204ENST00000601038 NDUFA5Q16718 116 aa9.72□□□□□ -0.85
SCAF1-204ENST00000601038 MEIG1Q5JSS6 88 aa9.72□□□□□ -0.85
SCAF1-204ENST00000601038 LCE2AQ5TA79 106 aaPredicted RBP9.72□□□□□ -0.85
SCAF1-204ENST00000601038 MIR7-3HGQ8N6C7 128 aa9.72□□□□□ -0.85
SCAF1-204ENST00000601038 PPDPFQ9H3Y8 114 aa9.72□□□□□ -0.85
SCAF1-204ENST00000601038 KCNQ1DNQ9H478 68 aa9.72□□□□□ -0.85
SCAF1-204ENST00000601038 LINC00587B1AMM8 73 aa9.71□□□□□ -0.86
SCAF1-204ENST00000601038 LINC00337Q8N6G1 96 aa9.71□□□□□ -0.86
SCAF1-204ENST00000601038 C4orf48Q5BLP8 95 aa9.7□□□□□ -0.86
SCAF1-204ENST00000601038 YPEL4Q96NS1 127 aa9.7□□□□□ -0.86
SCAF1-204ENST00000601038 KRTAP4-16G5E9R7 235 aaPredicted RBP9.69□□□□□ -0.86
SCAF1-204ENST00000601038 NCR3O14931 201 aa9.69□□□□□ -0.86
SCAF1-204ENST00000601038 SMCR5Q8TEV8 140 aa9.69□□□□□ -0.86
SCAF1-204ENST00000601038 NDUFA12Q9UI09 145 aa9.69□□□□□ -0.86
SCAF1-204ENST00000601038 FP248Q71RG6 208 aaPredicted RBP9.68□□□□□ -0.86
SCAF1-204ENST00000601038 MYMXA0A1B0GTQ4 84 aa9.67□□□□□ -0.86
SCAF1-204ENST00000601038 ETDCA0A1B0GVM5 59 aa9.67□□□□□ -0.86
SCAF1-204ENST00000601038 Q8NBF4 154 aa9.67□□□□□ -0.86
SCAF1-204ENST00000601038 MAP1LC3CQ9BXW4 147 aa9.67□□□□□ -0.86
SCAF1-204ENST00000601038 TRBV10-3A0A0K0K1G6 114 aa9.66□□□□□ -0.86
SCAF1-204ENST00000601038 HSBP1O75506 76 aa9.66□□□□□ -0.86
SCAF1-204ENST00000601038 FAM19A2Q8N3H0 131 aa9.66□□□□□ -0.86
SCAF1-204ENST00000601038 DAND5Q8N907 189 aa9.66□□□□□ -0.86
SCAF1-204ENST00000601038 KRTAP9-2Q9BYQ4 174 aa9.65□□□□□ -0.86
SCAF1-204ENST00000601038 LOC107984156A0A0G2JMH3 177 aa9.64□□□□□ -0.87
SCAF1-204ENST00000601038 S100A12P80511 92 aa9.64□□□□□ -0.87
SCAF1-204ENST00000601038 LINC00483Q53H64 154 aa9.64□□□□□ -0.87
SCAF1-204ENST00000601038 ARL17AQ8IVW1 177 aa9.64□□□□□ -0.87
SCAF1-204ENST00000601038 SPINK1P00995 79 aa9.63□□□□□ -0.87
SCAF1-204ENST00000601038 H0Y8G0 127 aa9.62□□□□□ -0.87
SCAF1-204ENST00000601038 FAT4Q6V0I7 4981 aa9.62□□□□□ -0.87
SCAF1-204ENST00000601038 TRBV10-2A0A0K0K1G8 114 aa9.61□□□□□ -0.87
SCAF1-204ENST00000601038 B5MCH6 92 aa9.61□□□□□ -0.87
SCAF1-204ENST00000601038 LEPROTO15243 131 aa9.61□□□□□ -0.87
SCAF1-204ENST00000601038 TSPEAR-AS2P59090 65 aa9.61□□□□□ -0.87
SCAF1-204ENST00000601038 KRTAP13-3Q3SY46 172 aa9.61□□□□□ -0.87
SCAF1-204ENST00000601038 GAGE2AQ6NT46 116 aa9.61□□□□□ -0.87
SCAF1-204ENST00000601038 LEPROTL1O95214 131 aa9.6□□□□□ -0.87
SCAF1-204ENST00000601038 PLNP26678 52 aa9.59□□□□□ -0.87
SCAF1-204ENST00000601038 DDTP30046 118 aa9.59□□□□□ -0.87
SCAF1-204ENST00000601038 J3QQQ9 107 aa9.58□□□□□ -0.88
SCAF1-204ENST00000601038 ERC2-IT1O76042 136 aa9.58□□□□□ -0.88
SCAF1-204ENST00000601038 SSBP3-AS1Q7Z2R9 100 aa9.58□□□□□ -0.88
SCAF1-204ENST00000601038 SERF1AO75920 110 aa9.57□□□□□ -0.88
SCAF1-204ENST00000601038 TRGC2P03986 189 aa9.57□□□□□ -0.88
SCAF1-204ENST00000601038 Q6ZRX8 168 aa9.57□□□□□ -0.88
SCAF1-204ENST00000601038 MUC17Q685J3 4493 aa9.56□□□□□ -0.88
SCAF1-204ENST00000601038 NMUP48645 174 aa9.56□□□□□ -0.88
SCAF1-204ENST00000601038 LINC00310P59036 64 aa9.56□□□□□ -0.88
SCAF1-204ENST00000601038 RPS29P62273 56 aaKnown RBP9.56□□□□□ -0.88
SCAF1-204ENST00000601038 MOBPQ13875 183 aa9.56□□□□□ -0.88
SCAF1-204ENST00000601038 Q9BRP9 147 aa9.56□□□□□ -0.88
SCAF1-204ENST00000601038 SPANXB1Q9NS25 103 aaPredicted RBP9.56□□□□□ -0.88
SCAF1-204ENST00000601038 IGLV9-49A0A0B4J1Y8 123 aa9.55□□□□□ -0.88
SCAF1-204ENST00000601038 NDUFC2O95298 119 aa9.55□□□□□ -0.88
SCAF1-204ENST00000601038 HERVK_113P61574 105 aa9.55□□□□□ -0.88
SCAF1-204ENST00000601038 ASB16-AS1Q495Z4 193 aa9.55□□□□□ -0.88
SCAF1-204ENST00000601038 MIEN1Q9BRT3 115 aa9.55□□□□□ -0.88
SCAF1-204ENST00000601038 HSPB8Q9UJY1 196 aa9.55□□□□□ -0.88
SCAF1-204ENST00000601038 DPM2O94777 84 aa9.54□□□□□ -0.88
SCAF1-204ENST00000601038 LGALS3P17931 250 aaKnown RBP9.54□□□□□ -0.88
SCAF1-204ENST00000601038 IGLV6-57P01721 117 aa9.53□□□□□ -0.88
SCAF1-204ENST00000601038 S100A7L2Q5SY68 101 aa9.53□□□□□ -0.88
SCAF1-204ENST00000601038 Q8N377 158 aa9.53□□□□□ -0.88
SCAF1-204ENST00000601038 IGKCP01834 107 aa9.52□□□□□ -0.89
SCAF1-204ENST00000601038 FABP4P15090 132 aa9.52□□□□□ -0.89
SCAF1-204ENST00000601038 PMCHL2Q9BQD1 86 aa9.52□□□□□ -0.89
SCAF1-204ENST00000601038 SLC25A20O43772 301 aa9.51□□□□□ -0.89
SCAF1-204ENST00000601038 JOSD1Q15040 202 aaPredicted RBP9.51□□□□□ -0.89
SCAF1-204ENST00000601038 SEC61BP60468 96 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms